RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 HIST1H1BP16401 226 aaKnown RBP10.12□□□□□ -0.79
CTSA-213ENST00000606782 SUB1P53999 127 aaKnown RBP eCLIP10.12□□□□□ -0.79
CTSA-213ENST00000606782 ATP5IP56385 69 aaPredicted RBP10.12□□□□□ -0.79
CTSA-213ENST00000606782 H2BFSP57053 126 aa10.12□□□□□ -0.79
CTSA-213ENST00000606782 POLR2GP62487 172 aaKnown RBP eCLIP10.12□□□□□ -0.79
CTSA-213ENST00000606782 CYCSP99999 105 aaKnown RBP10.12□□□□□ -0.79
CTSA-213ENST00000606782 EXOSC2Q13868 293 aaKnown RBP10.12□□□□□ -0.79
CTSA-213ENST00000606782 CITED4Q96RK1 184 aa10.12□□□□□ -0.79
CTSA-213ENST00000606782 NMES1Q9C002 83 aa10.12□□□□□ -0.79
CTSA-213ENST00000606782 MAGT1Q9H0U3 335 aa10.12□□□□□ -0.79
CTSA-213ENST00000606782 HEYLQ9NQ87 328 aaPredicted RBP10.12□□□□□ -0.79
CTSA-213ENST00000606782 PEMTQ9UBM1 199 aa10.12□□□□□ -0.79
CTSA-213ENST00000606782 MGAT4CQ9UBM8 478 aa10.12□□□□□ -0.79
CTSA-213ENST00000606782 U3KQ87 197 aa10.12□□□□□ -0.79
CTSA-213ENST00000606782 NDUFB8O95169 186 aa10.11□□□□□ -0.79
CTSA-213ENST00000606782 RNASE2P10153 161 aaKnown RBP10.11□□□□□ -0.79
CTSA-213ENST00000606782 CXCL3P19876 107 aa10.11□□□□□ -0.79
CTSA-213ENST00000606782 SNCAP37840 140 aa10.11□□□□□ -0.79
CTSA-213ENST00000606782 HTR2BP41595 481 aa10.11□□□□□ -0.79
CTSA-213ENST00000606782 HOXA1P49639 335 aaPredicted RBP10.11□□□□□ -0.79
CTSA-213ENST00000606782 PAX9P55771 341 aa10.11□□□□□ -0.79
CTSA-213ENST00000606782 RRAS2P62070 204 aaPredicted RBP10.11□□□□□ -0.79
CTSA-213ENST00000606782 FCN2Q15485 313 aa10.11□□□□□ -0.79
CTSA-213ENST00000606782 C15orf32Q32M92 178 aa10.11□□□□□ -0.79
CTSA-213ENST00000606782 C2orf83Q53S99 150 aa10.11□□□□□ -0.79
CTSA-213ENST00000606782 LCN12Q6JVE5 192 aa10.11□□□□□ -0.79
CTSA-213ENST00000606782 SLC25A24Q6NUK1 477 aa10.11□□□□□ -0.79
CTSA-213ENST00000606782 ADAMTSL5Q6ZMM2 481 aa10.11□□□□□ -0.79
CTSA-213ENST00000606782 SMIM8Q96KF7 97 aa10.11□□□□□ -0.79
CTSA-213ENST00000606782 CIB3Q96Q77 187 aaPredicted RBP10.11□□□□□ -0.79
CTSA-213ENST00000606782 OR2J3O76001 311 aa10.1□□□□□ -0.79
CTSA-213ENST00000606782 TMEM50AO95807 157 aa10.1□□□□□ -0.79
CTSA-213ENST00000606782 CASC10Q5T4H9 136 aa10.1□□□□□ -0.79
CTSA-213ENST00000606782 OR11H7Q8NGC8 314 aa10.1□□□□□ -0.79
CTSA-213ENST00000606782 TMEM170AQ8WVE7 144 aa10.1□□□□□ -0.79
CTSA-213ENST00000606782 WDR89Q96FK6 387 aaPredicted RBP10.1□□□□□ -0.79
CTSA-213ENST00000606782 C11orf1Q9H5F2 150 aa10.1□□□□□ -0.79
CTSA-213ENST00000606782 THYN1Q9P016 225 aa10.1□□□□□ -0.79
CTSA-213ENST00000606782 FBXL7Q9UJT9 491 aa10.1□□□□□ -0.79
CTSA-213ENST00000606782 IZUMO1RA6ND01 250 aa10.09□□□□□ -0.79
CTSA-213ENST00000606782 K7EPK0 472 aa10.09□□□□□ -0.79
CTSA-213ENST00000606782 LGALS9O00182 355 aa10.09□□□□□ -0.79
CTSA-213ENST00000606782 WRBO00258 174 aa10.09□□□□□ -0.79
CTSA-213ENST00000606782 CYB5BO43169 146 aa10.09□□□□□ -0.79
CTSA-213ENST00000606782 GGCTO75223 188 aaKnown RBP10.09□□□□□ -0.79
CTSA-213ENST00000606782 IAPPP10997 89 aa10.09□□□□□ -0.79
CTSA-213ENST00000606782 TAS2R30P59541 319 aa10.09□□□□□ -0.79
CTSA-213ENST00000606782 RAB32Q13637 225 aa10.09□□□□□ -0.79
CTSA-213ENST00000606782 NOXA1Q86UR1 476 aa10.09□□□□□ -0.79
CTSA-213ENST00000606782 GPHB5Q86YW7 130 aa10.09□□□□□ -0.79
CTSA-213ENST00000606782 VN1R17PQ8TDU5 208 aa10.09□□□□□ -0.79
CTSA-213ENST00000606782 RAB40CQ96S21 281 aa10.09□□□□□ -0.79
CTSA-213ENST00000606782 EDA2RQ9HAV5 297 aa10.09□□□□□ -0.79
CTSA-213ENST00000606782 TENM2Q9NT68 2774 aa10.09□□□□□ -0.79
CTSA-213ENST00000606782 ZNF785A8K8V0 405 aa10.08□□□□□ -0.8
CTSA-213ENST00000606782 I3L2K1 104 aa10.08□□□□□ -0.8
CTSA-213ENST00000606782 K7EIM0 57 aa10.08□□□□□ -0.8
CTSA-213ENST00000606782 SCGB1D2O95969 90 aa10.08□□□□□ -0.8
CTSA-213ENST00000606782 IFNA10P01566 189 aa10.08□□□□□ -0.8
CTSA-213ENST00000606782 HAGHQ16775 308 aa10.08□□□□□ -0.8
CTSA-213ENST00000606782 LINC00322Q6ZN03 302 aaPredicted RBP10.08□□□□□ -0.8
CTSA-213ENST00000606782 GTSCR1Q86UQ5 136 aa10.08□□□□□ -0.8
CTSA-213ENST00000606782 SLC24A4Q8NFF2 622 aa10.08□□□□□ -0.8
CTSA-213ENST00000606782 RNASEH2CQ8TDP1 164 aaKnown RBP10.08□□□□□ -0.8
CTSA-213ENST00000606782 ZNF436Q9C0F3 470 aaPredicted RBP10.08□□□□□ -0.8
CTSA-213ENST00000606782 ZC4H2Q9NQZ6 224 aa10.08□□□□□ -0.8
CTSA-213ENST00000606782 RCL1Q9Y2P8 373 aaKnown RBP10.08□□□□□ -0.8
CTSA-213ENST00000606782 RYR3Q15413 4870 aa10.08□□□□□ -0.8
CTSA-213ENST00000606782 C2orf70A6NJV1 201 aa10.07□□□□□ -0.8
CTSA-213ENST00000606782 C15orf62A8K5M9 175 aa10.07□□□□□ -0.8
CTSA-213ENST00000606782 SSSCA1O60232 199 aa10.07□□□□□ -0.8
CTSA-213ENST00000606782 NPY1RP25929 384 aa10.07□□□□□ -0.8
CTSA-213ENST00000606782 RPP30P78346 268 aaKnown RBP10.07□□□□□ -0.8
CTSA-213ENST00000606782 DEFB114Q30KQ6 69 aa10.07□□□□□ -0.8
CTSA-213ENST00000606782 CD300EQ496F6 205 aaPredicted RBP10.07□□□□□ -0.8
CTSA-213ENST00000606782 CHAC2Q8WUX2 184 aa10.07□□□□□ -0.8
CTSA-213ENST00000606782 PPP1R1CQ8WVI7 109 aa10.07□□□□□ -0.8
CTSA-213ENST00000606782 ASB13Q8WXK3 278 aa10.07□□□□□ -0.8
CTSA-213ENST00000606782 CXorf58Q96LI9 332 aa10.07□□□□□ -0.8
CTSA-213ENST00000606782 CCDC140Q96MF4 163 aa10.07□□□□□ -0.8
CTSA-213ENST00000606782 SPATA25Q9BR10 227 aa10.07□□□□□ -0.8
CTSA-213ENST00000606782 RNF126Q9BV68 326 aa10.07□□□□□ -0.8
CTSA-213ENST00000606782 TECRQ9NZ01 308 aaKnown RBP10.07□□□□□ -0.8
CTSA-213ENST00000606782 PSENENQ9NZ42 101 aa10.07□□□□□ -0.8
CTSA-213ENST00000606782 LSM5Q9Y4Y9 91 aaKnown RBP10.07□□□□□ -0.8
CTSA-213ENST00000606782 TRBV7-1A0A0A6YYK4 115 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 PPP5D1E7EU14 171 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 H0YIZ8 118 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 CORTO00230 105 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 TSC22D2O75157 780 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 DEDDO75618 318 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 OR2C1O95371 312 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 RLN2P04090 185 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 LYL1P12980 280 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 FOLR2P14207 255 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 FCGR2BP31994 310 aaPredicted RBP10.06□□□□□ -0.8
CTSA-213ENST00000606782 MLANAQ16655 118 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 SPANXN5Q5MJ07 72 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 TMEM14EPQ6UXP3 125 aa10.06□□□□□ -0.8
CTSA-213ENST00000606782 ZNF502Q8TBZ5 544 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms