RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 CTRB2Q6GPI1 263 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 OR52B4Q8NGK2 314 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 OR1L8Q8NGR8 309 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 OR4A16Q8NH70 328 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 IL22RA2Q969J5 263 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 OR4C12Q96R67 309 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 TSC22D3Q99576 134 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 NUDT15Q9NV35 164 aa9.19□□□□□ -0.94
HLA-F-230ENST00000606273 A0A0B4J2A0 478 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 H3BUA1 57 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 NXPH3O95157 252 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 NDUFB8O95169 186 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 BRI3O95415 125 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 HLA-AP01891 365 aaKnown RBP9.18□□□□□ -0.94
HLA-F-230ENST00000606273 OR13C7P0DN81 318 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 HSPE1P61604 102 aaKnown RBP9.18□□□□□ -0.94
HLA-F-230ENST00000606273 DHRS2Q13268 280 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 LINC00322Q6ZN03 302 aaPredicted RBP9.18□□□□□ -0.94
HLA-F-230ENST00000606273 NRARPQ7Z6K4 114 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 HAPLN4Q86UW8 402 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 LGI3Q8N145 548 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 OR5B3Q8NH48 314 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 LSM10Q969L4 123 aaKnown RBP9.18□□□□□ -0.94
HLA-F-230ENST00000606273 RRNAD1Q96FB5 475 aaKnown RBP9.18□□□□□ -0.94
HLA-F-230ENST00000606273 SLA2Q9H6Q3 261 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 TUBA4BQ9H853 241 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 CACNG5Q9UF02 275 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 SHPKQ9UHJ6 478 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 ZNF257Q9Y2Q1 563 aa9.18□□□□□ -0.94
HLA-F-230ENST00000606273 IGLV11-55A0A075B6I3 123 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 MPTX1A8MV57 137 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 ADAP1O75689 374 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 OR2J3O76001 311 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 ATG12O94817 140 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 IGLV1-51P01701 117 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 TRBV12-3P01733 135 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 ANXA3P12429 323 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 RHOGP84095 191 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 PRCDQ00LT1 54 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 KLK9Q2XQG4 91 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 AARDQ4LEZ3 155 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 LYG2Q86SG7 212 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 LRTM2Q8N967 370 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 RNASE11Q8TAA1 199 aaKnown RBP9.17□□□□□ -0.94
HLA-F-230ENST00000606273 SEC22CQ9BRL7 303 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 FKBP11Q9NYL4 201 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 KLK9Q9UKQ9 250 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 S4R3C0 116 aa9.17□□□□□ -0.94
HLA-F-230ENST00000606273 IGHV4OR15-8A0A075B7B6 117 aa9.16□□□□□ -0.94
HLA-F-230ENST00000606273 A0A087WW49 117 aa9.16□□□□□ -0.94
HLA-F-230ENST00000606273 FAM240BA0A1B0GVZ2 78 aa9.16□□□□□ -0.94
HLA-F-230ENST00000606273 IGHV3-23P01764 117 aa9.16□□□□□ -0.94
HLA-F-230ENST00000606273 HOXB5P09067 269 aa9.16□□□□□ -0.94
HLA-F-230ENST00000606273 LGALS1P09382 135 aaKnown RBP9.16□□□□□ -0.94
HLA-F-230ENST00000606273 MECP2P51608 486 aaKnown RBP9.16□□□□□ -0.94
HLA-F-230ENST00000606273 C4orf46Q504U0 113 aa9.16□□□□□ -0.94
HLA-F-230ENST00000606273 FAM219AQ8IW50 185 aa9.16□□□□□ -0.94
HLA-F-230ENST00000606273 OR2C3Q8N628 320 aa9.16□□□□□ -0.94
HLA-F-230ENST00000606273 SRSF8Q9BRL6 282 aaKnown RBP9.16□□□□□ -0.94
HLA-F-230ENST00000606273 MFSD2BA6NFX1 497 aa9.15□□□□□ -0.94
HLA-F-230ENST00000606273 LINC01619G3V211 115 aa9.15□□□□□ -0.94
HLA-F-230ENST00000606273 IFNA17P01571 189 aa9.15□□□□□ -0.94
HLA-F-230ENST00000606273 SRPXP78539 464 aa9.15□□□□□ -0.94
HLA-F-230ENST00000606273 GGNBP1Q5YKI7 109 aa9.15□□□□□ -0.94
HLA-F-230ENST00000606273 MZT2BQ6NZ67 158 aa9.15□□□□□ -0.94
HLA-F-230ENST00000606273 DUSP18Q8NEJ0 188 aa9.15□□□□□ -0.94
HLA-F-230ENST00000606273 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.15□□□□□ -0.94
HLA-F-230ENST00000606273 F11RQ9Y624 299 aaKnown RBP9.15□□□□□ -0.94
HLA-F-230ENST00000606273 IGHV3-21A0A0B4J1V1 117 aa9.14□□□□□ -0.95
HLA-F-230ENST00000606273 C13orf42A0A1B0GVH6 325 aa9.14□□□□□ -0.95
HLA-F-230ENST00000606273 PITX3O75364 302 aa9.14□□□□□ -0.95
HLA-F-230ENST00000606273 SULT1A3P0DMM9 295 aa9.14□□□□□ -0.95
HLA-F-230ENST00000606273 SULT1A4P0DMN0 295 aa9.14□□□□□ -0.95
HLA-F-230ENST00000606273 DEFA4P12838 97 aa9.14□□□□□ -0.95
HLA-F-230ENST00000606273 SMCO1Q147U7 214 aa9.14□□□□□ -0.95
HLA-F-230ENST00000606273 C15orf32Q32M92 178 aa9.14□□□□□ -0.95
HLA-F-230ENST00000606273 THOC7Q6I9Y2 204 aaKnown RBP9.14□□□□□ -0.95
HLA-F-230ENST00000606273 ZNF343Q6P1L6 599 aa9.14□□□□□ -0.95
HLA-F-230ENST00000606273 NECAP1Q8NC96 275 aa9.14□□□□□ -0.95
HLA-F-230ENST00000606273 ENKURQ8TC29 256 aa9.14□□□□□ -0.95
HLA-F-230ENST00000606273 PLEKHA3Q9HB20 300 aa9.14□□□□□ -0.95
HLA-F-230ENST00000606273 DUXBA0A1W2PPF3 345 aa9.13□□□□□ -0.95
HLA-F-230ENST00000606273 CXorf65A6NEN9 183 aa9.13□□□□□ -0.95
HLA-F-230ENST00000606273 FAM223BA6NKX1 122 aa9.13□□□□□ -0.95
HLA-F-230ENST00000606273 INS-IGF2F8WCM5 200 aa9.13□□□□□ -0.95
HLA-F-230ENST00000606273 RNASE2P10153 161 aaKnown RBP9.13□□□□□ -0.95
HLA-F-230ENST00000606273 ATP5G2Q06055 141 aa9.13□□□□□ -0.95
HLA-F-230ENST00000606273 EXOSC2Q13868 293 aaKnown RBP9.13□□□□□ -0.95
HLA-F-230ENST00000606273 TM4SF20Q53R12 229 aa9.13□□□□□ -0.95
HLA-F-230ENST00000606273 SLC25A24Q6NUK1 477 aa9.13□□□□□ -0.95
HLA-F-230ENST00000606273 CEMP1Q6PRD7 247 aaPredicted RBP9.13□□□□□ -0.95
HLA-F-230ENST00000606273 HSD17B13Q7Z5P4 300 aaPredicted RBP9.13□□□□□ -0.95
HLA-F-230ENST00000606273 FAM223AQ8IWN6 122 aa9.13□□□□□ -0.95
HLA-F-230ENST00000606273 OR52E5Q8NH55 327 aa9.13□□□□□ -0.95
HLA-F-230ENST00000606273 ZNF431Q8TF32 576 aaPredicted RBP9.13□□□□□ -0.95
HLA-F-230ENST00000606273 MITD1Q8WV92 249 aa9.13□□□□□ -0.95
HLA-F-230ENST00000606273 TMEM170AQ8WVE7 144 aa9.13□□□□□ -0.95
HLA-F-230ENST00000606273 USMG5Q96IX5 58 aa9.13□□□□□ -0.95
HLA-F-230ENST00000606273 DYNC1H1Q14204 4646 aaKnown RBP9.13□□□□□ -0.95
HLA-F-230ENST00000606273 A0A0G2JLM5 398 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms