RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 FAM131AQ6UXB0 335 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 PPP1R27Q86WC6 154 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 H1FOOQ8IZA3 346 aaPredicted RBP2.57□□□□□ -2
CKS1BP3-201ENST00000600888 OR10J5Q8NHC4 309 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 VN1R17PQ8TDU5 208 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 FLYWCH2Q96CP2 140 aaKnown RBP2.57□□□□□ -2
CKS1BP3-201ENST00000600888 ADTRPQ96IZ2 230 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 TSNAXQ99598 290 aaKnown RBP2.57□□□□□ -2
CKS1BP3-201ENST00000600888 HDHD3Q9BSH5 251 aaPredicted RBP2.57□□□□□ -2
CKS1BP3-201ENST00000600888 NRN1Q9NPD7 142 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 RDH8Q9NYR8 311 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 OR1A1Q9P1Q5 309 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 LINC00527Q9UJ94 153 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 ZNF221Q9UK13 617 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 CELA1Q9UNI1 258 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 SSR3Q9UNL2 185 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 TENM3Q9P273 2699 aa2.57□□□□□ -2
CKS1BP3-201ENST00000600888 WI2-2373I1.2A0A1W2PRP0 233 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 TRIM64CA6NLI5 447 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 G3V318 75 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 H7C2Y5 167 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 FCN1O00602 326 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 SOX15O60248 233 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 IGLV2-23P01705 113 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 HLA-DQB1P01920 261 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 IGKV1-16P04430 117 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 LGALS1P09382 135 aaKnown RBP2.56□□□□□ -2
CKS1BP3-201ENST00000600888 OR8U8P0C7N1 319 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 OR8U9P0C7N5 309 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 GSTT2P0CG29 244 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 GSTT2BP0CG30 244 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 PSMB9P28065 219 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 TALDO1P37837 337 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 CXCL6P80162 114 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 ZNF616Q08AN1 781 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 ARFRP1Q13795 201 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 KLK9Q2XQG4 91 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 CDNFQ49AH0 187 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 SFXN4Q6P4A7 337 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 CNIH2Q6PI25 160 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 OR11H1Q8NG94 326 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 ATG5Q9H1Y0 275 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 OR2D2Q9H210 308 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 OR51E2Q9H255 320 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 FBXL15Q9H469 300 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 PARP11Q9NR21 331 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 SLC35D1Q9NTN3 355 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 SDHAF2Q9NX18 166 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 RHBDL2Q9NX52 303 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 METTL1Q9UBP6 276 aaKnown RBP2.56□□□□□ -2
CKS1BP3-201ENST00000600888 ANXA10Q9UJ72 324 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 KLK9Q9UKQ9 250 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 ZNF256Q9Y2P7 627 aaPredicted RBP2.56□□□□□ -2
CKS1BP3-201ENST00000600888 WSB1Q9Y6I7 421 aa2.56□□□□□ -2
CKS1BP3-201ENST00000600888 IGKV1D-8A0A087WSZ0 117 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 IGHV3-35A0A0C4DH35 117 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 A0A0G2JLM5 398 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 SEC14L6B5MCN3 397 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 LINC01619G3V211 115 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 M0R1X1 148 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 OVOL1O14753 267 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 BET1O15155 118 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 RBFOX2O43251 390 aaKnown RBP eCLIP2.55□□□□□ -2
CKS1BP3-201ENST00000600888 SSX5O60225 188 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 CREBL2O60519 120 aaPredicted RBP2.55□□□□□ -2
CKS1BP3-201ENST00000600888 TNFAIP8O95379 198 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 CA2P00918 260 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 PRB2P02812 416 aaPredicted RBP2.55□□□□□ -2
CKS1BP3-201ENST00000600888 HSPB1P04792 205 aaKnown RBP2.55□□□□□ -2
CKS1BP3-201ENST00000600888 AREGP15514 252 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 CD36P16671 472 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 CD40LGP29965 261 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 SDC2P34741 201 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 CBX5P45973 191 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 CNN1P51911 297 aaKnown RBP2.55□□□□□ -2
CKS1BP3-201ENST00000600888 GNG2P59768 71 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 UBE2KP61086 200 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 CBX3Q13185 183 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 EIF4EBP1Q13541 118 aaPredicted RBP2.55□□□□□ -2
CKS1BP3-201ENST00000600888 FXYD3Q14802 87 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 PLGLAQ15195 96 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 RTL8BQ17RB0 113 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 DEFB136Q30KP8 78 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 VMA21Q3ZAQ7 101 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 ACTBL2Q562R1 376 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 UNQ5815/PRO19632Q6UWF5 114 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 ADAMTSL5Q6ZMM2 481 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 ZNF429Q86V71 674 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 ZNF645Q8N7E2 425 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 DRAXINQ8NBI3 349 aaPredicted RBP2.55□□□□□ -2
CKS1BP3-201ENST00000600888 LFNGQ8NES3 379 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 OR1N2Q8NGR9 330 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 VSTM2AQ8TAG5 236 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 LGALS14Q8TCE9 139 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 DNAH3Q8TD57 4116 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 GIMAP1Q8WWP7 306 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 ARPC1AQ92747 370 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 SLC25A38Q96DW6 304 aa2.55□□□□□ -2
CKS1BP3-201ENST00000600888 RBMXL1Q96E39 390 aaKnown RBP2.55□□□□□ -2
CKS1BP3-201ENST00000600888 YIPF6Q96EC8 236 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms