RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 KCTD21Q4G0X4 260 aa10.71□□□□□ -0.69
XRCC1-209ENST00000599693 PHLDA2Q53GA4 152 aa10.71□□□□□ -0.69
XRCC1-209ENST00000599693 SOHLH1Q5JUK2 328 aa10.71□□□□□ -0.69
XRCC1-209ENST00000599693 Q6ZRM9 215 aa10.71□□□□□ -0.69
XRCC1-209ENST00000599693 UBE2DNLQ8IWF7 75 aa10.71□□□□□ -0.69
XRCC1-209ENST00000599693 OR5H2Q8NGV7 314 aa10.71□□□□□ -0.69
XRCC1-209ENST00000599693 IFNA21P01568 189 aa10.7□□□□□ -0.7
XRCC1-209ENST00000599693 IFNA17P01571 189 aa10.7□□□□□ -0.7
XRCC1-209ENST00000599693 IGKV1-39P01597 117 aa10.7□□□□□ -0.7
XRCC1-209ENST00000599693 IGKV1D-39P04432 117 aa10.7□□□□□ -0.7
XRCC1-209ENST00000599693 GABARAPL2P60520 117 aa10.7□□□□□ -0.7
XRCC1-209ENST00000599693 SPINK9Q5DT21 86 aa10.7□□□□□ -0.7
XRCC1-209ENST00000599693 NARS2Q96I59 477 aaKnown RBP10.7□□□□□ -0.7
XRCC1-209ENST00000599693 RAB40CQ96S21 281 aa10.7□□□□□ -0.7
XRCC1-209ENST00000599693 C1QTNF4Q9BXJ3 329 aa10.7□□□□□ -0.7
XRCC1-209ENST00000599693 HELTA6NFD8 242 aa10.69□□□□□ -0.7
XRCC1-209ENST00000599693 CORTO00230 105 aa10.69□□□□□ -0.7
XRCC1-209ENST00000599693 NAT1P18440 290 aa10.69□□□□□ -0.7
XRCC1-209ENST00000599693 S100GP29377 79 aa10.69□□□□□ -0.7
XRCC1-209ENST00000599693 SNCAP37840 140 aa10.69□□□□□ -0.7
XRCC1-209ENST00000599693 PPP5CP53041 499 aa10.69□□□□□ -0.7
XRCC1-209ENST00000599693 PSMG4Q5JS54 123 aa10.69□□□□□ -0.7
XRCC1-209ENST00000599693 TBC1D26Q86UD7 250 aa10.69□□□□□ -0.7
XRCC1-209ENST00000599693 OR6F1Q8NGZ6 308 aa10.69□□□□□ -0.7
XRCC1-209ENST00000599693 MRGPRFQ96AM1 343 aa10.69□□□□□ -0.7
XRCC1-209ENST00000599693 FAM210BQ96KR6 192 aa10.69□□□□□ -0.7
XRCC1-209ENST00000599693 CLN5O75503 358 aa10.68□□□□□ -0.7
XRCC1-209ENST00000599693 HSPA13P48723 471 aa10.68□□□□□ -0.7
XRCC1-209ENST00000599693 EIF2B2P49770 351 aaKnown RBP10.68□□□□□ -0.7
XRCC1-209ENST00000599693 NUTF2P61970 127 aaKnown RBP10.68□□□□□ -0.7
XRCC1-209ENST00000599693 DHRS2Q13268 280 aa10.68□□□□□ -0.7
XRCC1-209ENST00000599693 SPARTQ8N0X7 666 aa10.68□□□□□ -0.7
XRCC1-209ENST00000599693 SLC35G3Q8N808 338 aa10.68□□□□□ -0.7
XRCC1-209ENST00000599693 FCGR1BQ92637 280 aa10.68□□□□□ -0.7
XRCC1-209ENST00000599693 RNF167Q9H6Y7 350 aa10.68□□□□□ -0.7
XRCC1-209ENST00000599693 MRPL36Q9P0J6 103 aaKnown RBP10.68□□□□□ -0.7
XRCC1-209ENST00000599693 XCL2Q9UBD3 114 aa10.68□□□□□ -0.7
XRCC1-209ENST00000599693 INS-IGF2F8WCM5 200 aa10.67□□□□□ -0.7
XRCC1-209ENST00000599693 SCGB2A1O75556 95 aa10.67□□□□□ -0.7
XRCC1-209ENST00000599693 SPART-AS1P0CW21 52 aa10.67□□□□□ -0.7
XRCC1-209ENST00000599693 C1orf134Q5TEV5 83 aa10.67□□□□□ -0.7
XRCC1-209ENST00000599693 LPCAT3Q6P1A2 487 aa10.67□□□□□ -0.7
XRCC1-209ENST00000599693 IZUMO2Q6UXV1 221 aa10.67□□□□□ -0.7
XRCC1-209ENST00000599693 TMEM230Q96A57 120 aa10.67□□□□□ -0.7
XRCC1-209ENST00000599693 NEU1Q99519 415 aa10.67□□□□□ -0.7
XRCC1-209ENST00000599693 FNDC4Q9H6D8 234 aaPredicted RBP10.67□□□□□ -0.7
XRCC1-209ENST00000599693 LRP1BQ9NZR2 4599 aa10.66□□□□□ -0.7
XRCC1-209ENST00000599693 NACAE9PAV3 2078 aa10.66□□□□□ -0.7
XRCC1-209ENST00000599693 TMEM189A5PLL7 270 aa10.66□□□□□ -0.7
XRCC1-209ENST00000599693 CDK2AP2O75956 126 aa10.66□□□□□ -0.7
XRCC1-209ENST00000599693 RNASE2P10153 161 aaKnown RBP10.66□□□□□ -0.7
XRCC1-209ENST00000599693 HRH1P35367 487 aa10.66□□□□□ -0.7
XRCC1-209ENST00000599693 SUB1P53999 127 aaKnown RBP eCLIP10.66□□□□□ -0.7
XRCC1-209ENST00000599693 TAS2R20P59543 309 aa10.66□□□□□ -0.7
XRCC1-209ENST00000599693 IZUMO4Q1ZYL8 232 aa10.66□□□□□ -0.7
XRCC1-209ENST00000599693 RNF212Q495C1 297 aa10.66□□□□□ -0.7
XRCC1-209ENST00000599693 ZNF705AQ6ZN79 300 aaPredicted RBP10.66□□□□□ -0.7
XRCC1-209ENST00000599693 OR4X1Q8NH49 305 aa10.66□□□□□ -0.7
XRCC1-209ENST00000599693 S100A16Q96FQ6 103 aaKnown RBP10.66□□□□□ -0.7
XRCC1-209ENST00000599693 VCX3BQ9H321 246 aa10.66□□□□□ -0.7
XRCC1-209ENST00000599693 U3KQE9 123 aa10.66□□□□□ -0.7
XRCC1-209ENST00000599693 LOC100506127A0A0U1RQW1 187 aa10.65□□□□□ -0.7
XRCC1-209ENST00000599693 FAM90A26D6RGX4 464 aa10.65□□□□□ -0.7
XRCC1-209ENST00000599693 ANKRD65E5RJM6 399 aa10.65□□□□□ -0.7
XRCC1-209ENST00000599693 H3BMM0 161 aa10.65□□□□□ -0.7
XRCC1-209ENST00000599693 TMEM127O75204 238 aa10.65□□□□□ -0.7
XRCC1-209ENST00000599693 IGKV1-17P01599 117 aa10.65□□□□□ -0.7
XRCC1-209ENST00000599693 OPRK1P41145 380 aa10.65□□□□□ -0.7
XRCC1-209ENST00000599693 AP2S1P53680 142 aaPredicted RBP10.65□□□□□ -0.7
XRCC1-209ENST00000599693 SNRPD3P62318 126 aaKnown RBP10.65□□□□□ -0.7
XRCC1-209ENST00000599693 TMEM69Q5SWH9 247 aa10.65□□□□□ -0.7
XRCC1-209ENST00000599693 C16orf54Q6UWD8 224 aa10.65□□□□□ -0.7
XRCC1-209ENST00000599693 GLMPQ8WWB7 406 aa10.65□□□□□ -0.7
XRCC1-209ENST00000599693 TEX48A0A1B0GUV7 120 aa10.64□□□□□ -0.71
XRCC1-209ENST00000599693 SMIM9A6NGZ8 99 aa10.64□□□□□ -0.71
XRCC1-209ENST00000599693 ZNF705FA8MVS1 300 aaPredicted RBP10.64□□□□□ -0.71
XRCC1-209ENST00000599693 C16orf90A8MZG2 172 aa10.64□□□□□ -0.71
XRCC1-209ENST00000599693 IGKV1-5P01602 117 aa10.64□□□□□ -0.71
XRCC1-209ENST00000599693 HNRNPCP07910 306 aaKnown RBP eCLIP10.64□□□□□ -0.71
XRCC1-209ENST00000599693 P0C879 139 aa10.64□□□□□ -0.71
XRCC1-209ENST00000599693 ZNF705DP0CH99 300 aaPredicted RBP10.64□□□□□ -0.71
XRCC1-209ENST00000599693 ZNF705BP0CI00 300 aaPredicted RBP10.64□□□□□ -0.71
XRCC1-209ENST00000599693 HLA-DMAP28067 261 aa10.64□□□□□ -0.71
XRCC1-209ENST00000599693 RPL5P46777 297 aaKnown RBP10.64□□□□□ -0.71
XRCC1-209ENST00000599693 HOXA1P49639 335 aaPredicted RBP10.64□□□□□ -0.71
XRCC1-209ENST00000599693 EMP1P54849 157 aa10.64□□□□□ -0.71
XRCC1-209ENST00000599693 TSPAN5P62079 268 aa10.64□□□□□ -0.71
XRCC1-209ENST00000599693 MLANAQ16655 118 aa10.64□□□□□ -0.71
XRCC1-209ENST00000599693 TIGITQ495A1 244 aa10.64□□□□□ -0.71
XRCC1-209ENST00000599693 UBE2NLQ5JXB2 153 aa10.64□□□□□ -0.71
XRCC1-209ENST00000599693 LYSMD2Q8IV50 215 aa10.64□□□□□ -0.71
XRCC1-209ENST00000599693 MAPKAPK5-AS1Q8N8E1 139 aa10.64□□□□□ -0.71
XRCC1-209ENST00000599693 SEPSECSQ9HD40 501 aaKnown RBP10.64□□□□□ -0.71
XRCC1-209ENST00000599693 TRAV30A0A087WSZ9 112 aa10.63□□□□□ -0.71
XRCC1-209ENST00000599693 A0A0B4J293 547 aa10.63□□□□□ -0.71
XRCC1-209ENST00000599693 HLA-DRB4P13762 266 aa10.63□□□□□ -0.71
XRCC1-209ENST00000599693 UCP3P55916 312 aa10.63□□□□□ -0.71
XRCC1-209ENST00000599693 PDCD10Q9BUL8 212 aa10.63□□□□□ -0.71
XRCC1-209ENST00000599693 NRN1Q9NPD7 142 aa10.63□□□□□ -0.71
XRCC1-209ENST00000599693 DKK2Q9UBU2 259 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms