RNA–Protein interactions for RNA: ENST00000597816.5

LTBP4-218, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-218ENST00000597816 NMSQ5H8A3 153 aa12.11□□□□□ -0.47
LTBP4-218ENST00000597816 SLC16A13Q7RTY0 426 aa12.11□□□□□ -0.47
LTBP4-218ENST00000597816 HIPK2Q9H2X6 1198 aa12.11□□□□□ -0.47
LTBP4-218ENST00000597816 NBEAL2Q6ZNJ1 2754 aa12.1□□□□□ -0.47
LTBP4-218ENST00000597816 IGHV3OR16-8A0A075B7F1 116 aa12.1□□□□□ -0.47
LTBP4-218ENST00000597816 A0A1B0GU03 582 aa12.1□□□□□ -0.47
LTBP4-218ENST00000597816 DUXBA0A1W2PPF3 345 aa12.1□□□□□ -0.47
LTBP4-218ENST00000597816 OR11H12B2RN74 326 aa12.1□□□□□ -0.47
LTBP4-218ENST00000597816 ZNF207O43670 478 aaKnown RBP12.1□□□□□ -0.47
LTBP4-218ENST00000597816 RBMS2Q15434 407 aaKnown RBP12.1□□□□□ -0.47
LTBP4-218ENST00000597816 MLANAQ16655 118 aa12.1□□□□□ -0.47
LTBP4-218ENST00000597816 C2orf83Q53S99 150 aa12.1□□□□□ -0.47
LTBP4-218ENST00000597816 LAMTOR1Q6IAA8 161 aa12.1□□□□□ -0.47
LTBP4-218ENST00000597816 CENPSQ8N2Z9 138 aa12.1□□□□□ -0.47
LTBP4-218ENST00000597816 OR52B4Q8NGK2 314 aa12.1□□□□□ -0.47
LTBP4-218ENST00000597816 OR10C1Q96KK4 312 aa12.1□□□□□ -0.47
LTBP4-218ENST00000597816 SDHCQ99643 169 aaPredicted RBP12.1□□□□□ -0.47
LTBP4-218ENST00000597816 FNDC4Q9H6D8 234 aaPredicted RBP12.1□□□□□ -0.47
LTBP4-218ENST00000597816 SMPXQ9UHP9 88 aa12.1□□□□□ -0.47
LTBP4-218ENST00000597816 TRAV14DV4A0A0A6YYC5 116 aa12.09□□□□□ -0.47
LTBP4-218ENST00000597816 CENPXA8MT69 81 aa12.09□□□□□ -0.47
LTBP4-218ENST00000597816 VAMP1P23763 118 aa12.09□□□□□ -0.47
LTBP4-218ENST00000597816 OPRK1P41145 380 aa12.09□□□□□ -0.47
LTBP4-218ENST00000597816 TNFRSF9Q07011 255 aa12.09□□□□□ -0.47
LTBP4-218ENST00000597816 NOXA1Q86UR1 476 aa12.09□□□□□ -0.47
LTBP4-218ENST00000597816 DEFB125Q8N687 156 aa12.09□□□□□ -0.47
LTBP4-218ENST00000597816 LRTM2Q8N967 370 aa12.09□□□□□ -0.47
LTBP4-218ENST00000597816 OR4X1Q8NH49 305 aa12.09□□□□□ -0.47
LTBP4-218ENST00000597816 ZNF414Q96IQ9 312 aa12.09□□□□□ -0.47
LTBP4-218ENST00000597816 RCHY1Q96PM5 261 aa12.09□□□□□ -0.47
LTBP4-218ENST00000597816 TM2D3Q9BRN9 247 aa12.09□□□□□ -0.47
LTBP4-218ENST00000597816 HSPB7Q9UBY9 170 aa12.09□□□□□ -0.47
LTBP4-218ENST00000597816 IGHV7-4-1A0A0J9YVY3 117 aa12.08□□□□□ -0.48
LTBP4-218ENST00000597816 RPS10-NUDT3A0A1W2PQS6 291 aa12.08□□□□□ -0.48
LTBP4-218ENST00000597816 TSPAN4O14817 238 aa12.08□□□□□ -0.48
LTBP4-218ENST00000597816 CLN5O75503 358 aa12.08□□□□□ -0.48
LTBP4-218ENST00000597816 NXPH3O95157 252 aa12.08□□□□□ -0.48
LTBP4-218ENST00000597816 SFT2D2O95562 160 aa12.08□□□□□ -0.48
LTBP4-218ENST00000597816 UBE2MP61081 183 aaKnown RBP12.08□□□□□ -0.48
LTBP4-218ENST00000597816 HAGHQ16775 308 aa12.08□□□□□ -0.48
LTBP4-218ENST00000597816 TOMM20LQ6UXN7 152 aa12.08□□□□□ -0.48
LTBP4-218ENST00000597816 ZNF600Q6ZNG1 722 aa12.08□□□□□ -0.48
LTBP4-218ENST00000597816 TMEM116Q8NCL8 245 aa12.08□□□□□ -0.48
LTBP4-218ENST00000597816 SLC24A4Q8NFF2 622 aa12.08□□□□□ -0.48
LTBP4-218ENST00000597816 OR1S1Q8NH92 325 aa12.08□□□□□ -0.48
LTBP4-218ENST00000597816 RNASEH2CQ8TDP1 164 aaKnown RBP12.08□□□□□ -0.48
LTBP4-218ENST00000597816 C7orf50Q9BRJ6 194 aaKnown RBP12.08□□□□□ -0.48
LTBP4-218ENST00000597816 U3KQ87 197 aa12.08□□□□□ -0.48
LTBP4-218ENST00000597816 HUWE1Q7Z6Z7 4374 aaKnown RBP12.08□□□□□ -0.48
LTBP4-218ENST00000597816 TRAV30A0A087WSZ9 112 aa12.07□□□□□ -0.48
LTBP4-218ENST00000597816 LINC00854A0A1B0GVQ3 168 aa12.07□□□□□ -0.48
LTBP4-218ENST00000597816 SCGB2A1O75556 95 aa12.07□□□□□ -0.48
LTBP4-218ENST00000597816 NDUFB6O95139 128 aa12.07□□□□□ -0.48
LTBP4-218ENST00000597816 SLC25A6P12236 298 aa12.07□□□□□ -0.48
LTBP4-218ENST00000597816 PPP1R1AQ13522 171 aa12.07□□□□□ -0.48
LTBP4-218ENST00000597816 ETFRF1Q6IPR1 90 aa12.07□□□□□ -0.48
LTBP4-218ENST00000597816 LINC00322Q6ZN03 302 aaPredicted RBP12.07□□□□□ -0.48
LTBP4-218ENST00000597816 SPAG8Q99932 426 aaPredicted RBP12.07□□□□□ -0.48
LTBP4-218ENST00000597816 GINS3Q9BRX5 216 aa12.07□□□□□ -0.48
LTBP4-218ENST00000597816 RHPN1-AS1Q9BWJ2 59 aa12.07□□□□□ -0.48
LTBP4-218ENST00000597816 RBKSQ9H477 322 aa12.07□□□□□ -0.48
LTBP4-218ENST00000597816 SRD5A3Q9H8P0 318 aa12.07□□□□□ -0.48
LTBP4-218ENST00000597816 MRPL36Q9P0J6 103 aaKnown RBP12.07□□□□□ -0.48
LTBP4-218ENST00000597816 CHEK1O14757 476 aa12.06□□□□□ -0.48
LTBP4-218ENST00000597816 IFNA10P01566 189 aa12.06□□□□□ -0.48
LTBP4-218ENST00000597816 SLC25A4P12235 298 aa12.06□□□□□ -0.48
LTBP4-218ENST00000597816 IL7P13232 177 aa12.06□□□□□ -0.48
LTBP4-218ENST00000597816 NPY1RP25929 384 aa12.06□□□□□ -0.48
LTBP4-218ENST00000597816 ATP5IP56385 69 aaPredicted RBP12.06□□□□□ -0.48
LTBP4-218ENST00000597816 DTD1Q8TEA8 209 aa12.06□□□□□ -0.48
LTBP4-218ENST00000597816 WFDC10AQ9H1F0 79 aa12.06□□□□□ -0.48
LTBP4-218ENST00000597816 TMED3Q9Y3Q3 217 aa12.06□□□□□ -0.48
LTBP4-218ENST00000597816 PUS1Q9Y606 427 aaKnown RBP eCLIP12.06□□□□□ -0.48
LTBP4-218ENST00000597816 RBMY1BA6NDE4 496 aaKnown RBP12.05□□□□□ -0.48
LTBP4-218ENST00000597816 RBMY1EA6NEQ0 496 aaKnown RBP12.05□□□□□ -0.48
LTBP4-218ENST00000597816 PITX3O75364 302 aa12.05□□□□□ -0.48
LTBP4-218ENST00000597816 RBMY1DP0C7P1 496 aaKnown RBP12.05□□□□□ -0.48
LTBP4-218ENST00000597816 BMI1P35226 326 aa12.05□□□□□ -0.48
LTBP4-218ENST00000597816 CNPY1Q3B7I2 92 aa12.05□□□□□ -0.48
LTBP4-218ENST00000597816 PRSS54Q6PEW0 395 aa12.05□□□□□ -0.48
LTBP4-218ENST00000597816 TMEM170AQ8WVE7 144 aa12.05□□□□□ -0.48
LTBP4-218ENST00000597816 RNF2Q99496 336 aa12.05□□□□□ -0.48
LTBP4-218ENST00000597816 SPATA25Q9BR10 227 aa12.05□□□□□ -0.48
LTBP4-218ENST00000597816 IGHV3-49A0A0A0MS15 119 aa12.04□□□□□ -0.48
LTBP4-218ENST00000597816 C9orf170A2RU37 121 aa12.04□□□□□ -0.48
LTBP4-218ENST00000597816 CD5P06127 495 aa12.04□□□□□ -0.48
LTBP4-218ENST00000597816 ZFAND3Q9H8U3 227 aa12.04□□□□□ -0.48
LTBP4-218ENST00000597816 FLVCR2Q9UPI3 526 aa12.04□□□□□ -0.48
LTBP4-218ENST00000597816 OR4C46A6NHA9 309 aa12.03□□□□□ -0.48
LTBP4-218ENST00000597816 FAM90A26D6RGX4 464 aa12.03□□□□□ -0.48
LTBP4-218ENST00000597816 MED6O75586 246 aa12.03□□□□□ -0.48
LTBP4-218ENST00000597816 IGKV1-17P01599 117 aa12.03□□□□□ -0.48
LTBP4-218ENST00000597816 HOXB5P09067 269 aa12.03□□□□□ -0.48
LTBP4-218ENST00000597816 NPPCP23582 126 aa12.03□□□□□ -0.48
LTBP4-218ENST00000597816 TIGITQ495A1 244 aa12.03□□□□□ -0.48
LTBP4-218ENST00000597816 GGNBP1Q5YKI7 109 aa12.03□□□□□ -0.48
LTBP4-218ENST00000597816 LINC00299Q6ZSB3 139 aa12.03□□□□□ -0.48
LTBP4-218ENST00000597816 OR1S2Q8NGQ3 325 aa12.03□□□□□ -0.48
LTBP4-218ENST00000597816 IGHV3OR16-13A0A075B7E8 117 aa12.02□□□□□ -0.49
LTBP4-218ENST00000597816 IGHV3-74A0A0B4J1X5 117 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms