RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TRIM16LQ309B1 348 aa12.71□□□□□ -0.37
RETREG3-210ENST00000590541 LAMTOR1Q6IAA8 161 aa12.71□□□□□ -0.37
RETREG3-210ENST00000590541 SLC35G3Q8N808 338 aa12.71□□□□□ -0.37
RETREG3-210ENST00000590541 UBAC2Q8NBM4 344 aa12.71□□□□□ -0.37
RETREG3-210ENST00000590541 MARCH1Q8TCQ1 289 aa12.71□□□□□ -0.37
RETREG3-210ENST00000590541 MISP3Q96FF7 219 aa12.71□□□□□ -0.37
RETREG3-210ENST00000590541 PRRT1Q99946 306 aa12.71□□□□□ -0.37
RETREG3-210ENST00000590541 RARRES2Q99969 163 aa12.71□□□□□ -0.37
RETREG3-210ENST00000590541 KRTAP4-5Q9BYR2 181 aa12.71□□□□□ -0.37
RETREG3-210ENST00000590541 C11orf68Q9H3H3 251 aaKnown RBP12.71□□□□□ -0.37
RETREG3-210ENST00000590541 MUC4Q99102 2169 aa12.71□□□□□ -0.37
RETREG3-210ENST00000590541 F8W735 103 aaPredicted RBP12.7□□□□□ -0.38
RETREG3-210ENST00000590541 I3L2K1 104 aa12.7□□□□□ -0.38
RETREG3-210ENST00000590541 CORTO00230 105 aa12.7□□□□□ -0.38
RETREG3-210ENST00000590541 GSTZ1O43708 216 aaPredicted RBP12.7□□□□□ -0.38
RETREG3-210ENST00000590541 IGKV1-5P01602 117 aa12.7□□□□□ -0.38
RETREG3-210ENST00000590541 CTSGP08311 255 aa12.7□□□□□ -0.38
RETREG3-210ENST00000590541 ADMP35318 185 aa12.7□□□□□ -0.38
RETREG3-210ENST00000590541 CHRDL1Q9BU40 450 aa12.7□□□□□ -0.38
RETREG3-210ENST00000590541 C6orf62Q9GZU0 229 aaPredicted RBP12.7□□□□□ -0.38
RETREG3-210ENST00000590541 TMEM222Q9H0R3 208 aa12.7□□□□□ -0.38
RETREG3-210ENST00000590541 CACFD1Q9UGQ2 172 aa12.7□□□□□ -0.38
RETREG3-210ENST00000590541 IGHV3-21A0A0B4J1V1 117 aa12.69□□□□□ -0.38
RETREG3-210ENST00000590541 A0A0B4J293 547 aa12.69□□□□□ -0.38
RETREG3-210ENST00000590541 CDS2O95674 445 aa12.69□□□□□ -0.38
RETREG3-210ENST00000590541 IFNA17P01571 189 aa12.69□□□□□ -0.38
RETREG3-210ENST00000590541 DHODHQ02127 395 aa12.69□□□□□ -0.38
RETREG3-210ENST00000590541 SCGB3A2Q96PL1 93 aa12.69□□□□□ -0.38
RETREG3-210ENST00000590541 SLIRPQ9GZT3 109 aaKnown RBP12.69□□□□□ -0.38
RETREG3-210ENST00000590541 TEX13DA0A0J9YY54 714 aaPredicted RBP12.68□□□□□ -0.38
RETREG3-210ENST00000590541 ANKRD20A5PA0PJZ0 165 aa12.68□□□□□ -0.38
RETREG3-210ENST00000590541 H3BMQ9 156 aa12.68□□□□□ -0.38
RETREG3-210ENST00000590541 ST8SIA3O43173 380 aa12.68□□□□□ -0.38
RETREG3-210ENST00000590541 GNG7O60262 68 aa12.68□□□□□ -0.38
RETREG3-210ENST00000590541 MT-CO2P00403 227 aa12.68□□□□□ -0.38
RETREG3-210ENST00000590541 NPBWR1P48145 328 aa12.68□□□□□ -0.38
RETREG3-210ENST00000590541 SP6Q3SY56 376 aa12.68□□□□□ -0.38
RETREG3-210ENST00000590541 APRG1Q8IVJ8 170 aa12.68□□□□□ -0.38
RETREG3-210ENST00000590541 OR4C16Q8NGL9 310 aa12.68□□□□□ -0.38
RETREG3-210ENST00000590541 RNASE11Q8TAA1 199 aaKnown RBP12.68□□□□□ -0.38
RETREG3-210ENST00000590541 RBPMSQ93062 196 aaKnown RBP12.68□□□□□ -0.38
RETREG3-210ENST00000590541 RTBDNQ9BSG5 229 aaPredicted RBP12.68□□□□□ -0.38
RETREG3-210ENST00000590541 C20orf24Q9BUV8 137 aa12.68□□□□□ -0.38
RETREG3-210ENST00000590541 NXF2Q9GZY0 626 aaKnown RBP12.68□□□□□ -0.38
RETREG3-210ENST00000590541 CSTL1Q9H114 145 aa12.68□□□□□ -0.38
RETREG3-210ENST00000590541 ENY2Q9NPA8 101 aa12.68□□□□□ -0.38
RETREG3-210ENST00000590541 SCP2D1Q9UJQ7 156 aa12.68□□□□□ -0.38
RETREG3-210ENST00000590541 GPR132Q9UNW8 380 aa12.68□□□□□ -0.38
RETREG3-210ENST00000590541 IGLL5B9A064 214 aa12.67□□□□□ -0.38
RETREG3-210ENST00000590541 CD5P06127 495 aa12.67□□□□□ -0.38
RETREG3-210ENST00000590541 ZNF124Q15973 351 aa12.67□□□□□ -0.38
RETREG3-210ENST00000590541 AARDQ4LEZ3 155 aa12.67□□□□□ -0.38
RETREG3-210ENST00000590541 PVRIGQ6DKI7 326 aa12.67□□□□□ -0.38
RETREG3-210ENST00000590541 DUSP18Q8NEJ0 188 aa12.67□□□□□ -0.38
RETREG3-210ENST00000590541 OR11H2Q8NH07 326 aa12.67□□□□□ -0.38
RETREG3-210ENST00000590541 OR52E5Q8NH55 327 aa12.67□□□□□ -0.38
RETREG3-210ENST00000590541 GLYATL2Q8WU03 294 aa12.67□□□□□ -0.38
RETREG3-210ENST00000590541 OR10C1Q96KK4 312 aa12.67□□□□□ -0.38
RETREG3-210ENST00000590541 NAA60Q9H7X0 242 aa12.67□□□□□ -0.38
RETREG3-210ENST00000590541 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.67□□□□□ -0.38
RETREG3-210ENST00000590541 PKD1P98161 4303 aa12.67□□□□□ -0.38
RETREG3-210ENST00000590541 FABP12A6NFH5 140 aa12.66□□□□□ -0.38
RETREG3-210ENST00000590541 OR4C46A6NHA9 309 aa12.66□□□□□ -0.38
RETREG3-210ENST00000590541 MPTX1A8MV57 137 aa12.66□□□□□ -0.38
RETREG3-210ENST00000590541 DEFB4AO15263 64 aa12.66□□□□□ -0.38
RETREG3-210ENST00000590541 SCGB2A1O75556 95 aa12.66□□□□□ -0.38
RETREG3-210ENST00000590541 OR5AC1P0C628 307 aa12.66□□□□□ -0.38
RETREG3-210ENST00000590541 SPCS3P61009 180 aa12.66□□□□□ -0.38
RETREG3-210ENST00000590541 IZUMO4Q1ZYL8 232 aa12.66□□□□□ -0.38
RETREG3-210ENST00000590541 FAAP20Q6NZ36 180 aa12.66□□□□□ -0.38
RETREG3-210ENST00000590541 MCFD2Q8NI22 146 aa12.66□□□□□ -0.38
RETREG3-210ENST00000590541 PINX1Q96BK5 328 aaKnown RBP12.66□□□□□ -0.38
RETREG3-210ENST00000590541 SOSTQ9BQB4 213 aa12.66□□□□□ -0.38
RETREG3-210ENST00000590541 GINS3Q9BRX5 216 aa12.66□□□□□ -0.38
RETREG3-210ENST00000590541 SMPXQ9UHP9 88 aa12.66□□□□□ -0.38
RETREG3-210ENST00000590541 KCNIP3Q9Y2W7 256 aa12.66□□□□□ -0.38
RETREG3-210ENST00000590541 PIGBOS1A0A0B4J2F0 54 aa12.65□□□□□ -0.38
RETREG3-210ENST00000590541 CRYM-AS1A6NIL9 109 aa12.65□□□□□ -0.38
RETREG3-210ENST00000590541 TNFSF8P32971 234 aa12.65□□□□□ -0.38
RETREG3-210ENST00000590541 HOXA1P49639 335 aaPredicted RBP12.65□□□□□ -0.38
RETREG3-210ENST00000590541 CMC4P56277 68 aaPredicted RBP12.65□□□□□ -0.38
RETREG3-210ENST00000590541 OR51S1Q8NGJ8 323 aa12.65□□□□□ -0.38
RETREG3-210ENST00000590541 IL22RA2Q969J5 263 aa12.65□□□□□ -0.38
RETREG3-210ENST00000590541 TRAV14DV4A0A0A6YYC5 116 aa12.64□□□□□ -0.39
RETREG3-210ENST00000590541 IGHV7-4-1A0A0J9YVY3 117 aa12.64□□□□□ -0.39
RETREG3-210ENST00000590541 PRSS29PA6NIE9 313 aa12.64□□□□□ -0.39
RETREG3-210ENST00000590541 YIF1AO95070 293 aa12.64□□□□□ -0.39
RETREG3-210ENST00000590541 RNASE2P10153 161 aaKnown RBP12.64□□□□□ -0.39
RETREG3-210ENST00000590541 FAUP35544 74 aaKnown RBP12.64□□□□□ -0.39
RETREG3-210ENST00000590541 ETV6P41212 452 aa12.64□□□□□ -0.39
RETREG3-210ENST00000590541 TMEM116Q8NCL8 245 aa12.64□□□□□ -0.39
RETREG3-210ENST00000590541 TMEM56-RWDD3S4R434 201 aa12.64□□□□□ -0.39
RETREG3-210ENST00000590541 RTL8CO15255 209 aa12.63□□□□□ -0.39
RETREG3-210ENST00000590541 HTR2BP41595 481 aa12.63□□□□□ -0.39
RETREG3-210ENST00000590541 AP3S2P59780 193 aa12.63□□□□□ -0.39
RETREG3-210ENST00000590541 BSXQ3C1V8 233 aa12.63□□□□□ -0.39
RETREG3-210ENST00000590541 SPINK9Q5DT21 86 aa12.63□□□□□ -0.39
RETREG3-210ENST00000590541 ZNF600Q6ZNG1 722 aa12.63□□□□□ -0.39
RETREG3-210ENST00000590541 SELENOHQ8IZQ5 122 aaKnown RBP12.63□□□□□ -0.39
RETREG3-210ENST00000590541 DEDD2Q8WXF8 326 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms