RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 RAB26Q9ULW5 256 aa9.89□□□□□ -0.83
CLPTM1-208ENST00000588274 DEFB131BA0A096LNP1 70 aa9.88□□□□□ -0.83
CLPTM1-208ENST00000588274 IGKV1-17P01599 117 aa9.88□□□□□ -0.83
CLPTM1-208ENST00000588274 EIF4EP06730 217 aaKnown RBP9.88□□□□□ -0.83
CLPTM1-208ENST00000588274 RNASE2P10153 161 aaKnown RBP9.88□□□□□ -0.83
CLPTM1-208ENST00000588274 P2RY1P47900 373 aa9.88□□□□□ -0.83
CLPTM1-208ENST00000588274 NPBWR1P48145 328 aa9.88□□□□□ -0.83
CLPTM1-208ENST00000588274 TAS2R46P59540 309 aa9.88□□□□□ -0.83
CLPTM1-208ENST00000588274 LGALS9BQ3B8N2 356 aa9.88□□□□□ -0.83
CLPTM1-208ENST00000588274 BSXQ3C1V8 233 aa9.88□□□□□ -0.83
CLPTM1-208ENST00000588274 STXBP6Q8NFX7 210 aa9.88□□□□□ -0.83
CLPTM1-208ENST00000588274 TSPAN14Q8NG11 270 aa9.88□□□□□ -0.83
CLPTM1-208ENST00000588274 U3KQE9 123 aa9.88□□□□□ -0.83
CLPTM1-208ENST00000588274 A0A0B4J293 547 aa9.87□□□□□ -0.83
CLPTM1-208ENST00000588274 LOC100506127A0A0U1RQW1 187 aa9.87□□□□□ -0.83
CLPTM1-208ENST00000588274 ACTL10Q5JWF8 245 aa9.87□□□□□ -0.83
CLPTM1-208ENST00000588274 H2BFWTQ7Z2G1 175 aa9.87□□□□□ -0.83
CLPTM1-208ENST00000588274 ZNF575Q86XF7 245 aa9.87□□□□□ -0.83
CLPTM1-208ENST00000588274 OR4A16Q8NH70 328 aa9.87□□□□□ -0.83
CLPTM1-208ENST00000588274 HERC1Q15751 4861 aa9.87□□□□□ -0.83
CLPTM1-208ENST00000588274 M0R2N4 97 aa9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 TMEM127O75204 238 aa9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 CLN5O75503 358 aa9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 P0DMU3 169 aa9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 FAM231AP0DMU4 169 aa9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 FAM231CP0DMU5 169 aa9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 NPPCP23582 126 aa9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 HLA-DMAP28067 261 aa9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 RPL11P62913 178 aaKnown RBP9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 MLANAQ16655 118 aa9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 UBE2NLQ5JXB2 153 aa9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 TMEM69Q5SWH9 247 aa9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 OR6F1Q8NGZ6 308 aa9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 GPX8Q8TED1 209 aa9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 GLMPQ8WWB7 406 aa9.86□□□□□ -0.83
CLPTM1-208ENST00000588274 A0A0G2JRQ6 117 aa9.85□□□□□ -0.83
CLPTM1-208ENST00000588274 UCP3P55916 312 aa9.85□□□□□ -0.83
CLPTM1-208ENST00000588274 ZNF705AQ6ZN79 300 aaPredicted RBP9.85□□□□□ -0.83
CLPTM1-208ENST00000588274 OR4X1Q8NH49 305 aa9.85□□□□□ -0.83
CLPTM1-208ENST00000588274 RAB40CQ96S21 281 aa9.85□□□□□ -0.83
CLPTM1-208ENST00000588274 NDUFAF3Q9BU61 184 aa9.85□□□□□ -0.83
CLPTM1-208ENST00000588274 VCX3BQ9H321 246 aa9.85□□□□□ -0.83
CLPTM1-208ENST00000588274 TMEM231Q9H6L2 316 aa9.85□□□□□ -0.83
CLPTM1-208ENST00000588274 ZNF705FA8MVS1 300 aaPredicted RBP9.84□□□□□ -0.83
CLPTM1-208ENST00000588274 ZNF705DP0CH99 300 aaPredicted RBP9.84□□□□□ -0.83
CLPTM1-208ENST00000588274 ZNF705BP0CI00 300 aaPredicted RBP9.84□□□□□ -0.83
CLPTM1-208ENST00000588274 ERHP84090 104 aaKnown RBP9.84□□□□□ -0.83
CLPTM1-208ENST00000588274 Q6ZRM9 215 aa9.84□□□□□ -0.83
CLPTM1-208ENST00000588274 S100A16Q96FQ6 103 aaKnown RBP9.84□□□□□ -0.83
CLPTM1-208ENST00000588274 METTL26Q96S19 204 aa9.84□□□□□ -0.83
CLPTM1-208ENST00000588274 TP53RKQ96S44 253 aa9.84□□□□□ -0.83
CLPTM1-208ENST00000588274 NACAE9PAV3 2078 aa9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 A0A1W2PS18 150 aa9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 H3BMM0 161 aa9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 CORTO00230 105 aa9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 IGLC1P0CG04 106 aa9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 RPS19P39019 145 aaKnown RBP9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 RPL5P46777 297 aaKnown RBP9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 RND3P61587 244 aa9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 TIGITQ495A1 244 aa9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 KCTD21Q4G0X4 260 aa9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 AARDQ4LEZ3 155 aa9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 PSMG4Q5JS54 123 aa9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 C16orf54Q6UWD8 224 aa9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 LHFPL1Q86WI0 220 aa9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 SAMD12Q8N8I0 201 aa9.83□□□□□ -0.84
CLPTM1-208ENST00000588274 DNAH5Q8TE73 4624 aa9.82□□□□□ -0.84
CLPTM1-208ENST00000588274 HELTA6NFD8 242 aa9.82□□□□□ -0.84
CLPTM1-208ENST00000588274 FAM90A26D6RGX4 464 aa9.82□□□□□ -0.84
CLPTM1-208ENST00000588274 PRSS3P35030 304 aa9.82□□□□□ -0.84
CLPTM1-208ENST00000588274 DHRS2Q13268 280 aa9.82□□□□□ -0.84
CLPTM1-208ENST00000588274 USF2Q15853 346 aaPredicted RBP9.82□□□□□ -0.84
CLPTM1-208ENST00000588274 LPCAT3Q6P1A2 487 aa9.82□□□□□ -0.84
CLPTM1-208ENST00000588274 SLC35G3Q8N808 338 aa9.82□□□□□ -0.84
CLPTM1-208ENST00000588274 TMEM170AQ8WVE7 144 aa9.82□□□□□ -0.84
CLPTM1-208ENST00000588274 NEU1Q99519 415 aa9.82□□□□□ -0.84
CLPTM1-208ENST00000588274 XCL2Q9UBD3 114 aa9.82□□□□□ -0.84
CLPTM1-208ENST00000588274 IGLV2-18A0A075B6J9 118 aa9.81□□□□□ -0.84
CLPTM1-208ENST00000588274 PI3P19957 117 aa9.81□□□□□ -0.84
CLPTM1-208ENST00000588274 SNCAP37840 140 aa9.81□□□□□ -0.84
CLPTM1-208ENST00000588274 OPRK1P41145 380 aa9.81□□□□□ -0.84
CLPTM1-208ENST00000588274 ETV6P41212 452 aa9.81□□□□□ -0.84
CLPTM1-208ENST00000588274 NEDD8Q15843 81 aa9.81□□□□□ -0.84
CLPTM1-208ENST00000588274 GDF5OSQ5U4N7 250 aa9.81□□□□□ -0.84
CLPTM1-208ENST00000588274 YTHDF1Q9BYJ9 559 aaKnown RBP9.81□□□□□ -0.84
CLPTM1-208ENST00000588274 NXPH3O95157 252 aa9.8□□□□□ -0.84
CLPTM1-208ENST00000588274 HLA-DRB4P13762 266 aa9.8□□□□□ -0.84
CLPTM1-208ENST00000588274 DEFB1P60022 68 aa9.8□□□□□ -0.84
CLPTM1-208ENST00000588274 TSPAN5P62079 268 aa9.8□□□□□ -0.84
CLPTM1-208ENST00000588274 PRSS54Q6PEW0 395 aa9.8□□□□□ -0.84
CLPTM1-208ENST00000588274 CROCCP3Q8IVE0 287 aa9.8□□□□□ -0.84
CLPTM1-208ENST00000588274 ZNF709Q8N972 641 aa9.8□□□□□ -0.84
CLPTM1-208ENST00000588274 SCPEP1Q9HB40 452 aa9.8□□□□□ -0.84
CLPTM1-208ENST00000588274 SEPSECSQ9HD40 501 aaKnown RBP9.8□□□□□ -0.84
CLPTM1-208ENST00000588274 HLA-DRB4X5D2U9 266 aa9.8□□□□□ -0.84
CLPTM1-208ENST00000588274 M0QYG6 137 aa9.79□□□□□ -0.84
CLPTM1-208ENST00000588274 BUB3O43684 328 aa9.79□□□□□ -0.84
CLPTM1-208ENST00000588274 IFNA17P01571 189 aa9.79□□□□□ -0.84
CLPTM1-208ENST00000588274 HNRNPCP07910 306 aaKnown RBP eCLIP9.79□□□□□ -0.84
CLPTM1-208ENST00000588274 RCVRNP35243 200 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms