RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 TRAV14DV4A0A0A6YYC5 116 aa17.12■□□□□ 0.33
VAPA-205ENST00000578314 CHEK1O14757 476 aa17.12■□□□□ 0.33
VAPA-205ENST00000578314 TMEM50AO95807 157 aa17.12■□□□□ 0.33
VAPA-205ENST00000578314 PYDC2Q56P42 97 aa17.12■□□□□ 0.33
VAPA-205ENST00000578314 RHPN1-AS1Q9BWJ2 59 aa17.12■□□□□ 0.33
VAPA-205ENST00000578314 FNDC4Q9H6D8 234 aaPredicted RBP17.12■□□□□ 0.33
VAPA-205ENST00000578314 RETNQ9HD89 108 aa17.12■□□□□ 0.33
VAPA-205ENST00000578314 SACSQ9NZJ4 4579 aa17.12■□□□□ 0.33
VAPA-205ENST00000578314 ZNF701M0R085 212 aaPredicted RBP17.11■□□□□ 0.33
VAPA-205ENST00000578314 HTR2BP41595 481 aa17.11■□□□□ 0.33
VAPA-205ENST00000578314 TOMM20LQ6UXN7 152 aa17.11■□□□□ 0.33
VAPA-205ENST00000578314 RNF2Q99496 336 aa17.11■□□□□ 0.33
VAPA-205ENST00000578314 CACFD1Q9UGQ2 172 aa17.11■□□□□ 0.33
VAPA-205ENST00000578314 AKR1C4P17516 323 aa17.1■□□□□ 0.33
VAPA-205ENST00000578314 S100A5P33763 92 aa17.1■□□□□ 0.33
VAPA-205ENST00000578314 FAUP35544 74 aaKnown RBP17.1■□□□□ 0.33
VAPA-205ENST00000578314 AP3S2P59780 193 aa17.1■□□□□ 0.33
VAPA-205ENST00000578314 SUPT4H1P63272 117 aaKnown RBP17.1■□□□□ 0.33
VAPA-205ENST00000578314 MLANAQ16655 118 aa17.1■□□□□ 0.33
VAPA-205ENST00000578314 ZNF600Q6ZNG1 722 aa17.1■□□□□ 0.33
VAPA-205ENST00000578314 CCDC190Q86UF4 302 aa17.1■□□□□ 0.33
VAPA-205ENST00000578314 TOMM5Q8N4H5 51 aa17.1■□□□□ 0.33
VAPA-205ENST00000578314 OR4X1Q8NH49 305 aa17.1■□□□□ 0.33
VAPA-205ENST00000578314 GGTLC1Q9BX51 225 aa17.1■□□□□ 0.33
VAPA-205ENST00000578314 LOC102724200A0A096LPH7 203 aaPredicted RBP17.09■□□□□ 0.33
VAPA-205ENST00000578314 OR4C46A6NHA9 309 aa17.09■□□□□ 0.33
VAPA-205ENST00000578314 CLN5O75503 358 aa17.09■□□□□ 0.33
VAPA-205ENST00000578314 ZNF79Q15937 498 aa17.09■□□□□ 0.33
VAPA-205ENST00000578314 DEDD2Q8WXF8 326 aa17.09■□□□□ 0.33
VAPA-205ENST00000578314 FAM110AQ9BQ89 295 aa17.09■□□□□ 0.33
VAPA-205ENST00000578314 GINS3Q9BRX5 216 aa17.09■□□□□ 0.33
VAPA-205ENST00000578314 HEYLQ9NQ87 328 aaPredicted RBP17.09■□□□□ 0.33
VAPA-205ENST00000578314 MRPL36Q9P0J6 103 aaKnown RBP17.09■□□□□ 0.33
VAPA-205ENST00000578314 CSMD3Q7Z407 3707 aa17.08■□□□□ 0.33
VAPA-205ENST00000578314 A0A0B4J2A0 478 aa17.08■□□□□ 0.32
VAPA-205ENST00000578314 OPRK1P41145 380 aa17.08■□□□□ 0.32
VAPA-205ENST00000578314 ODF3L2Q3SX64 289 aa17.08■□□□□ 0.32
VAPA-205ENST00000578314 C2orf83Q53S99 150 aa17.08■□□□□ 0.32
VAPA-205ENST00000578314 NMSQ5H8A3 153 aa17.08■□□□□ 0.32
VAPA-205ENST00000578314 ZFAND3Q9H8U3 227 aa17.08■□□□□ 0.32
VAPA-205ENST00000578314 PRR13Q9NZ81 148 aa17.08■□□□□ 0.32
VAPA-205ENST00000578314 SHPKQ9UHJ6 478 aa17.08■□□□□ 0.32
VAPA-205ENST00000578314 PUS1Q9Y606 427 aaKnown RBP eCLIP17.08■□□□□ 0.32
VAPA-205ENST00000578314 STARD9Q9P2P6 4700 aa17.07■□□□□ 0.32
VAPA-205ENST00000578314 SULT1A3P0DMM9 295 aa17.07■□□□□ 0.32
VAPA-205ENST00000578314 SULT1A4P0DMN0 295 aa17.07■□□□□ 0.32
VAPA-205ENST00000578314 FAM90A2PQ658T7 463 aa17.07■□□□□ 0.32
VAPA-205ENST00000578314 VSIRQ9H7M9 311 aa17.07■□□□□ 0.32
VAPA-205ENST00000578314 UBQLN2Q9UHD9 624 aa17.07■□□□□ 0.32
VAPA-205ENST00000578314 IGHV3-49A0A0A0MS15 119 aa17.06■□□□□ 0.32
VAPA-205ENST00000578314 A0A1B0GU03 582 aa17.06■□□□□ 0.32
VAPA-205ENST00000578314 CEBPZOSA8MTT3 80 aa17.06■□□□□ 0.32
VAPA-205ENST00000578314 CD5P06127 495 aa17.06■□□□□ 0.32
VAPA-205ENST00000578314 ANXA3P12429 323 aa17.06■□□□□ 0.32
VAPA-205ENST00000578314 CCR6P51684 374 aa17.06■□□□□ 0.32
VAPA-205ENST00000578314 SRPXP78539 464 aa17.06■□□□□ 0.32
VAPA-205ENST00000578314 LYZL2Q7Z4W2 148 aa17.06■□□□□ 0.32
VAPA-205ENST00000578314 LGI3Q8N145 548 aa17.06■□□□□ 0.32
VAPA-205ENST00000578314 RNASEH2CQ8TDP1 164 aaKnown RBP17.06■□□□□ 0.32
VAPA-205ENST00000578314 TENM2Q9NT68 2774 aa17.05■□□□□ 0.32
VAPA-205ENST00000578314 RPS10-NUDT3A0A1W2PQS6 291 aa17.05■□□□□ 0.32
VAPA-205ENST00000578314 SLC24A4Q8NFF2 622 aa17.05■□□□□ 0.32
VAPA-205ENST00000578314 TMEM170AQ8WVE7 144 aa17.05■□□□□ 0.32
VAPA-205ENST00000578314 LYSTQ99698 3801 aa17.05■□□□□ 0.32
VAPA-205ENST00000578314 SLC25A21Q9BQT8 299 aaPredicted RBP17.05■□□□□ 0.32
VAPA-205ENST00000578314 IGHV3OR16-13A0A075B7E8 117 aa17.04■□□□□ 0.32
VAPA-205ENST00000578314 TRAV30A0A087WSZ9 112 aa17.04■□□□□ 0.32
VAPA-205ENST00000578314 IGHV3-74A0A0B4J1X5 117 aa17.04■□□□□ 0.32
VAPA-205ENST00000578314 SCGB2A1O75556 95 aa17.04■□□□□ 0.32
VAPA-205ENST00000578314 BMI1P35226 326 aa17.04■□□□□ 0.32
VAPA-205ENST00000578314 SMCO1Q147U7 214 aa17.04■□□□□ 0.32
VAPA-205ENST00000578314 TMEM128Q5BJH2 165 aa17.04■□□□□ 0.32
VAPA-205ENST00000578314 HSPB7Q9UBY9 170 aa17.04■□□□□ 0.32
VAPA-205ENST00000578314 PIGBOS1A0A0B4J2F0 54 aa17.03■□□□□ 0.32
VAPA-205ENST00000578314 IGKV1-17P01599 117 aa17.03■□□□□ 0.32
VAPA-205ENST00000578314 APOHP02749 345 aaPredicted RBP17.03■□□□□ 0.32
VAPA-205ENST00000578314 SLC25A4P12235 298 aa17.03■□□□□ 0.32
VAPA-205ENST00000578314 CMC4P56277 68 aaPredicted RBP17.03■□□□□ 0.32
VAPA-205ENST00000578314 TNFRSF9Q07011 255 aa17.03■□□□□ 0.32
VAPA-205ENST00000578314 ZFAND6Q6FIF0 208 aa17.03■□□□□ 0.32
VAPA-205ENST00000578314 PRSS54Q6PEW0 395 aa17.03■□□□□ 0.32
VAPA-205ENST00000578314 NOXA1Q86UR1 476 aa17.03■□□□□ 0.32
VAPA-205ENST00000578314 LILRB2Q8N423 598 aa17.03■□□□□ 0.32
VAPA-205ENST00000578314 ST8SIA2Q92186 375 aa17.03■□□□□ 0.32
VAPA-205ENST00000578314 OVOL2Q9BRP0 275 aa17.03■□□□□ 0.32
VAPA-205ENST00000578314 SPANXN2Q5MJ10 180 aa17.02■□□□□ 0.32
VAPA-205ENST00000578314 TMED4Q7Z7H5 227 aa17.02■□□□□ 0.32
VAPA-205ENST00000578314 U3KQ87 197 aa17.02■□□□□ 0.32
VAPA-205ENST00000578314 KIR2DL5BA0A0G2JN68 375 aa17.01■□□□□ 0.31
VAPA-205ENST00000578314 KIR2DL5BA0A0G2JPC4 375 aa17.01■□□□□ 0.31
VAPA-205ENST00000578314 DUXBA0A1W2PPF3 345 aa17.01■□□□□ 0.31
VAPA-205ENST00000578314 NXPH3O95157 252 aa17.01■□□□□ 0.31
VAPA-205ENST00000578314 NPPCP23582 126 aa17.01■□□□□ 0.31
VAPA-205ENST00000578314 NPY1RP25929 384 aa17.01■□□□□ 0.31
VAPA-205ENST00000578314 APOC4P55056 127 aa17.01■□□□□ 0.31
VAPA-205ENST00000578314 PAFAH1B2P68402 229 aa17.01■□□□□ 0.31
VAPA-205ENST00000578314 TIGITQ495A1 244 aa17.01■□□□□ 0.31
VAPA-205ENST00000578314 TCF24Q7RTU0 167 aa17.01■□□□□ 0.31
VAPA-205ENST00000578314 KIR2DL5AQ8N109 375 aa17.01■□□□□ 0.31
VAPA-205ENST00000578314 LRTM2Q8N967 370 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms