RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 SPATA12Q7Z6I5 190 aa8.66□□□□□ -1.02
PRPF8-208ENST00000573716 C6orf223Q8N319 242 aa8.66□□□□□ -1.02
PRPF8-208ENST00000573716 DCANP1Q8TF63 244 aa8.66□□□□□ -1.02
PRPF8-208ENST00000573716 VCXQ9H320 206 aa8.66□□□□□ -1.02
PRPF8-208ENST00000573716 RHBDL2Q9NX52 303 aa8.66□□□□□ -1.02
PRPF8-208ENST00000573716 EHFQ9NZC4 300 aa8.66□□□□□ -1.02
PRPF8-208ENST00000573716 NOTOA8MTQ0 251 aa8.65□□□□□ -1.02
PRPF8-208ENST00000573716 TMEM50AO95807 157 aa8.65□□□□□ -1.02
PRPF8-208ENST00000573716 FGF9P31371 208 aaPredicted RBP8.65□□□□□ -1.02
PRPF8-208ENST00000573716 PRCDQ00LT1 54 aa8.65□□□□□ -1.02
PRPF8-208ENST00000573716 OGFRL1Q5TC84 451 aaPredicted RBP8.65□□□□□ -1.02
PRPF8-208ENST00000573716 H2BFWTQ7Z2G1 175 aa8.65□□□□□ -1.02
PRPF8-208ENST00000573716 ZNF114Q8NC26 417 aa8.65□□□□□ -1.02
PRPF8-208ENST00000573716 OR5AP2Q8NGF4 316 aa8.65□□□□□ -1.02
PRPF8-208ENST00000573716 YTHDF1Q9BYJ9 559 aaKnown RBP8.65□□□□□ -1.02
PRPF8-208ENST00000573716 DUSP21Q9H596 190 aa8.65□□□□□ -1.02
PRPF8-208ENST00000573716 DKK2Q9UBU2 259 aa8.65□□□□□ -1.02
PRPF8-208ENST00000573716 RFNGQ9Y644 331 aa8.65□□□□□ -1.02
PRPF8-208ENST00000573716 NBDYA0A0U1RRE5 68 aa8.64□□□□□ -1.03
PRPF8-208ENST00000573716 TEX48A0A1B0GUV7 120 aa8.64□□□□□ -1.03
PRPF8-208ENST00000573716 TRDV1A0A1B0GX56 115 aa8.64□□□□□ -1.03
PRPF8-208ENST00000573716 CRYBB3P26998 211 aa8.64□□□□□ -1.03
PRPF8-208ENST00000573716 SNCAP37840 140 aa8.64□□□□□ -1.03
PRPF8-208ENST00000573716 SNRPD3P62318 126 aaKnown RBP8.64□□□□□ -1.03
PRPF8-208ENST00000573716 PRSS48Q7RTY5 328 aa8.64□□□□□ -1.03
PRPF8-208ENST00000573716 CMTM1Q8IZ96 169 aa8.64□□□□□ -1.03
PRPF8-208ENST00000573716 ZNF2Q9BSG1 426 aaPredicted RBP8.64□□□□□ -1.03
PRPF8-208ENST00000573716 IFT46Q9NQC8 304 aa8.64□□□□□ -1.03
PRPF8-208ENST00000573716 NDUFB11Q9NX14 153 aa8.64□□□□□ -1.03
PRPF8-208ENST00000573716 RRP15Q9Y3B9 282 aaKnown RBP8.64□□□□□ -1.03
PRPF8-208ENST00000573716 SMIM9A6NGZ8 99 aa8.63□□□□□ -1.03
PRPF8-208ENST00000573716 H3BMM0 161 aa8.63□□□□□ -1.03
PRPF8-208ENST00000573716 RFX2P48378 723 aa8.63□□□□□ -1.03
PRPF8-208ENST00000573716 DAD1P61803 113 aa8.63□□□□□ -1.03
PRPF8-208ENST00000573716 KCTD21Q4G0X4 260 aa8.63□□□□□ -1.03
PRPF8-208ENST00000573716 PHLDA2Q53GA4 152 aa8.63□□□□□ -1.03
PRPF8-208ENST00000573716 ZNF705AQ6ZN79 300 aaPredicted RBP8.63□□□□□ -1.03
PRPF8-208ENST00000573716 NEU1Q99519 415 aa8.63□□□□□ -1.03
PRPF8-208ENST00000573716 ZNF705FA8MVS1 300 aaPredicted RBP8.62□□□□□ -1.03
PRPF8-208ENST00000573716 EPM2AB3EWF7 344 aa8.62□□□□□ -1.03
PRPF8-208ENST00000573716 FAM90A26D6RGX4 464 aa8.62□□□□□ -1.03
PRPF8-208ENST00000573716 GPR31O00270 319 aa8.62□□□□□ -1.03
PRPF8-208ENST00000573716 SCGB2A1O75556 95 aa8.62□□□□□ -1.03
PRPF8-208ENST00000573716 PMP2P02689 132 aa8.62□□□□□ -1.03
PRPF8-208ENST00000573716 ZNF705DP0CH99 300 aaPredicted RBP8.62□□□□□ -1.03
PRPF8-208ENST00000573716 ZNF705BP0CI00 300 aaPredicted RBP8.62□□□□□ -1.03
PRPF8-208ENST00000573716 INAFM2P0DMQ5 153 aa8.62□□□□□ -1.03
PRPF8-208ENST00000573716 FAM3BP58499 235 aaPredicted RBP8.62□□□□□ -1.03
PRPF8-208ENST00000573716 HSPE1P61604 102 aaKnown RBP8.62□□□□□ -1.03
PRPF8-208ENST00000573716 IZUMO4Q1ZYL8 232 aa8.62□□□□□ -1.03
PRPF8-208ENST00000573716 TIGITQ495A1 244 aa8.62□□□□□ -1.03
PRPF8-208ENST00000573716 GSG1LQ6UXU4 331 aa8.62□□□□□ -1.03
PRPF8-208ENST00000573716 CADM3Q8N126 398 aa8.62□□□□□ -1.03
PRPF8-208ENST00000573716 SLC35G3Q8N808 338 aa8.62□□□□□ -1.03
PRPF8-208ENST00000573716 OR5H6Q8NGV6 325 aa8.62□□□□□ -1.03
PRPF8-208ENST00000573716 AUNIPQ9H7T9 357 aa8.62□□□□□ -1.03
PRPF8-208ENST00000573716 MRPL36Q9P0J6 103 aaKnown RBP8.62□□□□□ -1.03
PRPF8-208ENST00000573716 HERC1Q15751 4861 aa8.62□□□□□ -1.03
PRPF8-208ENST00000573716 LOC102723971A0A1B0GUV8 181 aa8.61□□□□□ -1.03
PRPF8-208ENST00000573716 CLN5O75503 358 aa8.61□□□□□ -1.03
PRPF8-208ENST00000573716 HLA-DRB4P13762 266 aa8.61□□□□□ -1.03
PRPF8-208ENST00000573716 OPRK1P41145 380 aa8.61□□□□□ -1.03
PRPF8-208ENST00000573716 CBX5P45973 191 aa8.61□□□□□ -1.03
PRPF8-208ENST00000573716 AP2S1P53680 142 aaPredicted RBP8.61□□□□□ -1.03
PRPF8-208ENST00000573716 DEFB1P60022 68 aa8.61□□□□□ -1.03
PRPF8-208ENST00000573716 SFXN4Q6P4A7 337 aa8.61□□□□□ -1.03
PRPF8-208ENST00000573716 C15orf53Q8NAA6 179 aa8.61□□□□□ -1.03
PRPF8-208ENST00000573716 MRGPRFQ96AM1 343 aa8.61□□□□□ -1.03
PRPF8-208ENST00000573716 SLC25A38Q96DW6 304 aa8.61□□□□□ -1.03
PRPF8-208ENST00000573716 SEC22AQ96IW7 307 aa8.61□□□□□ -1.03
PRPF8-208ENST00000573716 C7orf50Q9BRJ6 194 aaKnown RBP8.61□□□□□ -1.03
PRPF8-208ENST00000573716 FXYD6Q9H0Q3 95 aa8.61□□□□□ -1.03
PRPF8-208ENST00000573716 YTHDF2Q9Y5A9 579 aaKnown RBP8.61□□□□□ -1.03
PRPF8-208ENST00000573716 HLA-DRB4X5D2U9 266 aa8.61□□□□□ -1.03
PRPF8-208ENST00000573716 RPS10-NUDT3A0A1W2PQS6 291 aa8.6□□□□□ -1.03
PRPF8-208ENST00000573716 NUDT3O95989 172 aa8.6□□□□□ -1.03
PRPF8-208ENST00000573716 HNRNPCP07910 306 aaKnown RBP eCLIP8.6□□□□□ -1.03
PRPF8-208ENST00000573716 S100GP29377 79 aa8.6□□□□□ -1.03
PRPF8-208ENST00000573716 SUB1P53999 127 aaKnown RBP eCLIP8.6□□□□□ -1.03
PRPF8-208ENST00000573716 MXD1Q05195 221 aa8.6□□□□□ -1.03
PRPF8-208ENST00000573716 TBCEQ15813 527 aaPredicted RBP8.6□□□□□ -1.03
PRPF8-208ENST00000573716 MLANAQ16655 118 aa8.6□□□□□ -1.03
PRPF8-208ENST00000573716 GDF5OSQ5U4N7 250 aa8.6□□□□□ -1.03
PRPF8-208ENST00000573716 C16orf54Q6UWD8 224 aa8.6□□□□□ -1.03
PRPF8-208ENST00000573716 OR4B1Q8NGF8 309 aa8.6□□□□□ -1.03
PRPF8-208ENST00000573716 OR5H2Q8NGV7 314 aa8.6□□□□□ -1.03
PRPF8-208ENST00000573716 GLMPQ8WWB7 406 aa8.6□□□□□ -1.03
PRPF8-208ENST00000573716 DIABLOQ9NR28 239 aa8.6□□□□□ -1.03
PRPF8-208ENST00000573716 TXNL4BQ9NX01 149 aaKnown RBP8.6□□□□□ -1.03
PRPF8-208ENST00000573716 GOLT1BQ9Y3E0 138 aa8.6□□□□□ -1.03
PRPF8-208ENST00000573716 CORTO00230 105 aa8.59□□□□□ -1.03
PRPF8-208ENST00000573716 HBE1P02100 147 aa8.59□□□□□ -1.03
PRPF8-208ENST00000573716 HOXA1P49639 335 aaPredicted RBP8.59□□□□□ -1.03
PRPF8-208ENST00000573716 AQP4P55087 323 aa8.59□□□□□ -1.03
PRPF8-208ENST00000573716 OXA1LQ15070 435 aa8.59□□□□□ -1.03
PRPF8-208ENST00000573716 IDNKQ5T6J7 187 aa8.59□□□□□ -1.03
PRPF8-208ENST00000573716 DHRS11Q6UWP2 260 aa8.59□□□□□ -1.03
PRPF8-208ENST00000573716 TBC1D26Q86UD7 250 aa8.59□□□□□ -1.03
PRPF8-208ENST00000573716 ZNRF2Q8NHG8 242 aa8.59□□□□□ -1.03
PRPF8-208ENST00000573716 LINC00052Q96N35 136 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms