RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 RD3LP0DJH9 198 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 HIST1H1CP16403 213 aaKnown RBP2.46□□□□□ -2.02
LINC00560-201ENST00000564593 ATF1P18846 271 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 GUCA1AP43080 201 aaPredicted RBP2.46□□□□□ -2.02
LINC00560-201ENST00000564593 CBX5P45973 191 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 RPS11P62280 158 aaKnown RBP eCLIP2.46□□□□□ -2.02
LINC00560-201ENST00000564593 UBA52P62987 128 aaKnown RBP2.46□□□□□ -2.02
LINC00560-201ENST00000564593 HOXC5Q00444 222 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 IFITM2Q01629 132 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 PLCXD2Q0VAA5 305 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 SKP2Q13309 424 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 GRK1Q15835 563 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 ACTL10Q5JWF8 245 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 SAPCD1Q5SSQ6 148 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 TMEM244Q5VVB8 128 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 FAM104BQ5XKR9 115 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 EIF5AL1Q6IS14 154 aaKnown RBP2.46□□□□□ -2.02
LINC00560-201ENST00000564593 TEX261Q6UWH6 196 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 IDO2Q6ZQW0 420 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 GRINAQ7Z429 371 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 PRNTQ86SH4 94 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 LINC00337Q8N6G1 96 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 ZDHHC22Q8N966 263 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 ZNF738Q8NE65 137 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 OR5J2Q8NH18 312 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 OR51Q1Q8NH59 317 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 TMEM106AQ96A25 262 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 DDIT4LQ96D03 193 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 OR2A7Q96R45 310 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 ALX4Q9H161 411 aaPredicted RBP2.46□□□□□ -2.02
LINC00560-201ENST00000564593 TMEM138Q9NPI0 162 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 PARP11Q9NR21 331 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 MED9Q9NWA0 146 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 GLTPQ9NZD2 209 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 HHLA2Q9UM44 414 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 PCYT1BQ9Y5K3 369 aaPredicted RBP2.46□□□□□ -2.02
LINC00560-201ENST00000564593 INSIG2Q9Y5U4 225 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 U3KQ87 197 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 CPAMD8Q8IZJ3 1885 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 UNC13CQ8NB66 2214 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 TRANK1O15050 2925 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 CACNA1EQ15878 2313 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 A0A0D9SG52 128 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 KANTRA0A1W2PQU2 76 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 IZUMO1RA6ND01 250 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 ZNF736B4DX44 427 aaPredicted RBP2.45□□□□□ -2.02
LINC00560-201ENST00000564593 C9JQL5 133 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.45□□□□□ -2.02
LINC00560-201ENST00000564593 RLN2P04090 185 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 IFNA6P05013 189 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 PFN1P07737 140 aaKnown RBP2.45□□□□□ -2.02
LINC00560-201ENST00000564593 ASAH2BP0C7U1 165 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 GIMD1P0DJR0 217 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 GTF2F2P13984 249 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 NFYAP23511 347 aaPredicted RBP2.45□□□□□ -2.02
LINC00560-201ENST00000564593 S100A11P31949 105 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 EVI2BP34910 448 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 CAV3P56539 151 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 OR10A3P58181 314 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 FXYD6P3P58550 94 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 TAS2R20P59543 309 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 FLI1Q01543 452 aaPredicted RBP2.45□□□□□ -2.02
LINC00560-201ENST00000564593 MEF2CQ06413 473 aaPredicted RBP2.45□□□□□ -2.02
LINC00560-201ENST00000564593 RPL18Q07020 188 aaKnown RBP2.45□□□□□ -2.02
LINC00560-201ENST00000564593 IL15RAQ13261 267 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 ZNF345Q14585 488 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 RNASE10Q5GAN6 216 aaKnown RBP2.45□□□□□ -2.02
LINC00560-201ENST00000564593 TIMM23BQ5SRD1 257 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.45□□□□□ -2.02
LINC00560-201ENST00000564593 PP632Q6XCG6 107 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 TMEM136Q6ZRR5 245 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 FAM19A1Q7Z5A9 133 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 SLC51BQ86UW2 128 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 C1orf64Q8NEQ6 169 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 OR5H6Q8NGV6 325 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 OTOSQ8NHW6 89 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 C22orf15Q8WYQ4 148 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 NMNAT3Q96T66 252 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 PHB2Q99623 299 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 DHRS9Q9BPW9 319 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 WFDC6Q9BQY6 131 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 GINS4Q9BRT9 223 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 OR8D2Q9GZM6 311 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 TXNIPQ9H3M7 391 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 HRASLSQ9HDD0 168 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 IFT46Q9NQC8 304 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 POLR1DQ9Y2S0 133 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 PCNTO95613 3336 aa2.45□□□□□ -2.02
LINC00560-201ENST00000564593 OR4C45A6NMZ5 311 aa2.44□□□□□ -2.02
LINC00560-201ENST00000564593 I3L521 148 aa2.44□□□□□ -2.02
LINC00560-201ENST00000564593 TP53I11O14683 189 aa2.44□□□□□ -2.02
LINC00560-201ENST00000564593 HMGB3O15347 200 aaKnown RBP2.44□□□□□ -2.02
LINC00560-201ENST00000564593 ADAP1O75689 374 aa2.44□□□□□ -2.02
LINC00560-201ENST00000564593 RPP14O95059 124 aaKnown RBP2.44□□□□□ -2.02
LINC00560-201ENST00000564593 CXorf1O96002 111 aa2.44□□□□□ -2.02
LINC00560-201ENST00000564593 ISG15P05161 165 aa2.44□□□□□ -2.02
LINC00560-201ENST00000564593 GYPBP06028 91 aa2.44□□□□□ -2.02
LINC00560-201ENST00000564593 OR5AC1P0C628 307 aa2.44□□□□□ -2.02
LINC00560-201ENST00000564593 GABRA1P14867 456 aa2.44□□□□□ -2.02
LINC00560-201ENST00000564593 ALOX5APP20292 161 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms