RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 K7EM74 188 aa10.92□□□□□ -0.66
CLK3-206ENST00000562078 K7ENP7 123 aa10.92□□□□□ -0.66
CLK3-206ENST00000562078 FOXH1O75593 365 aa10.92□□□□□ -0.66
CLK3-206ENST00000562078 IGHG3P01860 377 aa10.92□□□□□ -0.66
CLK3-206ENST00000562078 CCDC144NLQ6NUI1 221 aa10.92□□□□□ -0.66
CLK3-206ENST00000562078 INO80CQ6PI98 192 aaPredicted RBP10.92□□□□□ -0.66
CLK3-206ENST00000562078 ZNF788Q6ZQV5 615 aa10.92□□□□□ -0.66
CLK3-206ENST00000562078 DKK4Q9UBT3 224 aa10.92□□□□□ -0.66
CLK3-206ENST00000562078 RAXQ9Y2V3 346 aa10.92□□□□□ -0.66
CLK3-206ENST00000562078 HILPDAQ9Y5L2 63 aa10.92□□□□□ -0.66
CLK3-206ENST00000562078 IGF2RP11717 2491 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 F2RL2O00254 374 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 OR10J4P0C629 311 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 SMIM17P0DL12 118 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 TMEM97Q5BJF2 176 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 SPATA31B1PQ5VZV4 182 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 MIC13Q5XKP0 118 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 FAM222BQ8WU58 562 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 FAM168AQ92567 244 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 RAB37Q96AX2 223 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 SSBP3Q9BWW4 388 aaPredicted RBP10.91□□□□□ -0.66
CLK3-206ENST00000562078 LIN7CQ9NUP9 197 aaKnown RBP10.91□□□□□ -0.66
CLK3-206ENST00000562078 MTCH1Q9NZJ7 389 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 TSSC4Q9Y5U2 329 aaPredicted RBP10.91□□□□□ -0.66
CLK3-206ENST00000562078 ATMQ13315 3056 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 A0A0G2JLM5 398 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 SMIM27A0A1W2PRY6 76 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 SYNGR1O43759 233 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 RHBDL1O75783 438 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 LYZL6O75951 148 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 HIST1H1EP10412 219 aaKnown RBP10.91□□□□□ -0.66
CLK3-206ENST00000562078 GCHFRP30047 84 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 TMPRSS3P57727 454 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 SEC11AP67812 179 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 ODF1Q14990 250 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 Q6ZS92 163 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 OR2Z1Q8NG97 314 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 C11orf52Q96A22 123 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 ABHD17AQ96GS6 310 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 TAAR6Q96RI8 345 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 SAP30LQ9HAJ7 183 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 WDR83OSQ9Y284 106 aa10.91□□□□□ -0.66
CLK3-206ENST00000562078 USF3Q68DE3 2245 aa10.9□□□□□ -0.66
CLK3-206ENST00000562078 HELTA6NFD8 242 aa10.9□□□□□ -0.66
CLK3-206ENST00000562078 LRRC30A6NM36 301 aa10.9□□□□□ -0.66
CLK3-206ENST00000562078 ANKRD30BLA7E2S9 258 aa10.9□□□□□ -0.66
CLK3-206ENST00000562078 IGHV1-2P23083 117 aa10.9□□□□□ -0.66
CLK3-206ENST00000562078 FABP6P51161 128 aa10.9□□□□□ -0.66
CLK3-206ENST00000562078 KLF5Q13887 457 aaPredicted RBP10.9□□□□□ -0.66
CLK3-206ENST00000562078 BHLHA15Q7RTS1 189 aaPredicted RBP10.9□□□□□ -0.66
CLK3-206ENST00000562078 RBMXL3Q8N7X1 1067 aaKnown RBP10.9□□□□□ -0.66
CLK3-206ENST00000562078 CNEP1R1Q8N9A8 125 aa10.9□□□□□ -0.66
CLK3-206ENST00000562078 IZUMO1RA6ND01 250 aa10.9□□□□□ -0.67
CLK3-206ENST00000562078 H3BRM9 83 aa10.9□□□□□ -0.67
CLK3-206ENST00000562078 FGF12P61328 243 aa10.9□□□□□ -0.67
CLK3-206ENST00000562078 ZNF816Q0VGE8 651 aaPredicted RBP10.9□□□□□ -0.67
CLK3-206ENST00000562078 TBC1D28Q2M2D7 210 aa10.9□□□□□ -0.67
CLK3-206ENST00000562078 IBA57Q5T440 356 aaKnown RBP10.9□□□□□ -0.67
CLK3-206ENST00000562078 ZNF488Q96MN9 340 aa10.9□□□□□ -0.67
CLK3-206ENST00000562078 OSTCQ9NRP0 149 aa10.9□□□□□ -0.67
CLK3-206ENST00000562078 SPCS1Q9Y6A9 102 aa10.9□□□□□ -0.67
CLK3-206ENST00000562078 GAGE12HA6NDE8 117 aa10.89□□□□□ -0.67
CLK3-206ENST00000562078 CA6P23280 308 aa10.89□□□□□ -0.67
CLK3-206ENST00000562078 FAM214BQ7L5A3 538 aa10.89□□□□□ -0.67
CLK3-206ENST00000562078 SSX8Q7RTT4 187 aa10.89□□□□□ -0.67
CLK3-206ENST00000562078 TMEM191AQ9H0A3 160 aa10.89□□□□□ -0.67
CLK3-206ENST00000562078 RP1L1Q8IWN7 2480 aaPredicted RBP10.89□□□□□ -0.67
CLK3-206ENST00000562078 NBEAQ8NFP9 2946 aa10.89□□□□□ -0.67
CLK3-206ENST00000562078 CACNA1DQ01668 2161 aa10.89□□□□□ -0.67
CLK3-206ENST00000562078 IGHV1-24A0A0C4DH33 117 aa10.89□□□□□ -0.67
CLK3-206ENST00000562078 RBMXL2O75526 392 aaKnown RBP10.89□□□□□ -0.67
CLK3-206ENST00000562078 REG1BP48304 166 aa10.89□□□□□ -0.67
CLK3-206ENST00000562078 MFAP2P55001 183 aa10.89□□□□□ -0.67
CLK3-206ENST00000562078 UCNP55089 124 aa10.89□□□□□ -0.67
CLK3-206ENST00000562078 BPIFA4PQ86YQ2 179 aa10.89□□□□□ -0.67
CLK3-206ENST00000562078 MKXQ8IYA7 352 aa10.89□□□□□ -0.67
CLK3-206ENST00000562078 NHLRC2Q8NBF2 726 aa10.89□□□□□ -0.67
CLK3-206ENST00000562078 MAP1BP46821 2468 aaKnown RBP10.88□□□□□ -0.67
CLK3-206ENST00000562078 PSMB11A5LHX3 300 aa10.88□□□□□ -0.67
CLK3-206ENST00000562078 HBZP02008 142 aa10.88□□□□□ -0.67
CLK3-206ENST00000562078 RAB31Q13636 194 aa10.88□□□□□ -0.67
CLK3-206ENST00000562078 KIR3DS1Q14943 382 aa10.88□□□□□ -0.67
CLK3-206ENST00000562078 C9orf106Q8NAJ2 232 aa10.88□□□□□ -0.67
CLK3-206ENST00000562078 SSMEM1Q8WWF3 244 aa10.88□□□□□ -0.67
CLK3-206ENST00000562078 PTPRQQ9UMZ3 2332 aa10.88□□□□□ -0.67
CLK3-206ENST00000562078 PIEZO2Q9H5I5 2752 aa10.88□□□□□ -0.67
CLK3-206ENST00000562078 FAM90A10PA6NDY2 464 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 FAM90A18PA6NE21 464 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 FAM90A16PA6NEW6 464 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 FBLL1A6NHQ2 334 aaKnown RBP10.87□□□□□ -0.67
CLK3-206ENST00000562078 FAM90A20PA6NIJ5 464 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 FAM90A8PA6NJQ4 464 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 FAM90A7PA6NKC0 464 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 C15orf62A8K5M9 175 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 FAM90A22PA8MWA6 464 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 FAM90A12PA8MX19 464 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 FAM90A5PA8MXJ8 464 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 FAM90A23PA8MXZ1 464 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 LEPROTL1O95214 131 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 FAM90A15PP0C7V4 464 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms