RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 ZNF688P0C7X2 276 aa17.5■□□□□ 0.39
FOXA1-204ENST00000554607 P0DMU3 169 aa17.5■□□□□ 0.39
FOXA1-204ENST00000554607 FAM231AP0DMU4 169 aa17.5■□□□□ 0.39
FOXA1-204ENST00000554607 FAM231CP0DMU5 169 aa17.5■□□□□ 0.39
FOXA1-204ENST00000554607 C4BPBP20851 252 aa17.5■□□□□ 0.39
FOXA1-204ENST00000554607 CRYBB3P26998 211 aa17.5■□□□□ 0.39
FOXA1-204ENST00000554607 KCTD21Q4G0X4 260 aa17.5■□□□□ 0.39
FOXA1-204ENST00000554607 SLC35G3Q8N808 338 aa17.5■□□□□ 0.39
FOXA1-204ENST00000554607 SAMD12Q8N8I0 201 aa17.5■□□□□ 0.39
FOXA1-204ENST00000554607 DNAH2Q9P225 4427 aa17.5■□□□□ 0.39
FOXA1-204ENST00000554607 PKHD1P08F94 4074 aa17.5■□□□□ 0.39
FOXA1-204ENST00000554607 KNCNA6PVL3 124 aa17.49■□□□□ 0.39
FOXA1-204ENST00000554607 P2RY1P47900 373 aa17.49■□□□□ 0.39
FOXA1-204ENST00000554607 EIF2B2P49770 351 aaKnown RBP17.49■□□□□ 0.39
FOXA1-204ENST00000554607 SPINK9Q5DT21 86 aa17.49■□□□□ 0.39
FOXA1-204ENST00000554607 ACTL10Q5JWF8 245 aa17.49■□□□□ 0.39
FOXA1-204ENST00000554607 POM121L12Q8N7R1 296 aa17.49■□□□□ 0.39
FOXA1-204ENST00000554607 TMEM230Q96A57 120 aa17.49■□□□□ 0.39
FOXA1-204ENST00000554607 DEFB131BA0A096LNP1 70 aa17.48■□□□□ 0.39
FOXA1-204ENST00000554607 CLN5O75503 358 aa17.48■□□□□ 0.39
FOXA1-204ENST00000554607 AMBPP02760 352 aa17.48■□□□□ 0.39
FOXA1-204ENST00000554607 CSNK1G2-AS1Q8NCQ2 148 aa17.48■□□□□ 0.39
FOXA1-204ENST00000554607 PDCD10Q9BUL8 212 aa17.48■□□□□ 0.39
FOXA1-204ENST00000554607 IFNA17P01571 189 aa17.47■□□□□ 0.39
FOXA1-204ENST00000554607 OR4X1Q8NH49 305 aa17.47■□□□□ 0.39
FOXA1-204ENST00000554607 GPX8Q8TED1 209 aa17.47■□□□□ 0.39
FOXA1-204ENST00000554607 DCANP1Q8TF63 244 aa17.47■□□□□ 0.39
FOXA1-204ENST00000554607 CLEC5AQ9NY25 188 aa17.47■□□□□ 0.39
FOXA1-204ENST00000554607 PRSS29PA6NIE9 313 aa17.46■□□□□ 0.39
FOXA1-204ENST00000554607 ATG12O94817 140 aa17.46■□□□□ 0.39
FOXA1-204ENST00000554607 NPY1RP25929 384 aa17.46■□□□□ 0.39
FOXA1-204ENST00000554607 NEDD8Q15843 81 aa17.46■□□□□ 0.39
FOXA1-204ENST00000554607 NDUFAF3Q9BU61 184 aa17.46■□□□□ 0.39
FOXA1-204ENST00000554607 TRAV30A0A087WSZ9 112 aa17.45■□□□□ 0.38
FOXA1-204ENST00000554607 RNASE2P10153 161 aaKnown RBP17.45■□□□□ 0.38
FOXA1-204ENST00000554607 OPRK1P41145 380 aa17.45■□□□□ 0.38
FOXA1-204ENST00000554607 RPL5P46777 297 aaKnown RBP17.45■□□□□ 0.38
FOXA1-204ENST00000554607 PPP5CP53041 499 aa17.45■□□□□ 0.38
FOXA1-204ENST00000554607 AP2S1P53680 142 aaPredicted RBP17.45■□□□□ 0.38
FOXA1-204ENST00000554607 NUTF2P61970 127 aaKnown RBP17.45■□□□□ 0.38
FOXA1-204ENST00000554607 IZUMO4Q1ZYL8 232 aa17.45■□□□□ 0.38
FOXA1-204ENST00000554607 C12orf74Q32Q52 190 aa17.45■□□□□ 0.38
FOXA1-204ENST00000554607 RAB40CQ96S21 281 aa17.45■□□□□ 0.38
FOXA1-204ENST00000554607 C1QTNF4Q9BXJ3 329 aa17.45■□□□□ 0.38
FOXA1-204ENST00000554607 SCPEP1Q9HB40 452 aa17.45■□□□□ 0.38
FOXA1-204ENST00000554607 ENY2Q9NPA8 101 aa17.45■□□□□ 0.38
FOXA1-204ENST00000554607 A0A0B4J293 547 aa17.44■□□□□ 0.38
FOXA1-204ENST00000554607 SMIM31A0A1B0GVY4 71 aa17.44■□□□□ 0.38
FOXA1-204ENST00000554607 HELTA6NFD8 242 aa17.44■□□□□ 0.38
FOXA1-204ENST00000554607 RPS19P39019 145 aaKnown RBP17.44■□□□□ 0.38
FOXA1-204ENST00000554607 AKR1C2P52895 323 aa17.44■□□□□ 0.38
FOXA1-204ENST00000554607 DHRS2Q13268 280 aa17.44■□□□□ 0.38
FOXA1-204ENST00000554607 CELA1Q9UNI1 258 aa17.44■□□□□ 0.38
FOXA1-204ENST00000554607 IGKV1-5P01602 117 aa17.43■□□□□ 0.38
FOXA1-204ENST00000554607 RCVRNP35243 200 aa17.43■□□□□ 0.38
FOXA1-204ENST00000554607 HOXA1P49639 335 aaPredicted RBP17.43■□□□□ 0.38
FOXA1-204ENST00000554607 RND3P61587 244 aa17.43■□□□□ 0.38
FOXA1-204ENST00000554607 ZNF486Q96H40 463 aaPredicted RBP17.43■□□□□ 0.38
FOXA1-204ENST00000554607 FNDC4Q9H6D8 234 aaPredicted RBP17.43■□□□□ 0.38
FOXA1-204ENST00000554607 MRPL36Q9P0J6 103 aaKnown RBP17.43■□□□□ 0.38
FOXA1-204ENST00000554607 P0C879 139 aa17.42■□□□□ 0.38
FOXA1-204ENST00000554607 ETV6P41212 452 aa17.42■□□□□ 0.38
FOXA1-204ENST00000554607 PSMG4Q5JS54 123 aa17.42■□□□□ 0.38
FOXA1-204ENST00000554607 ZNF767PQ75MW2 155 aa17.42■□□□□ 0.38
FOXA1-204ENST00000554607 U3KQE9 123 aa17.42■□□□□ 0.38
FOXA1-204ENST00000554607 DYNC1H1Q14204 4646 aaKnown RBP17.42■□□□□ 0.38
FOXA1-204ENST00000554607 RTL8CO15255 209 aa17.41■□□□□ 0.38
FOXA1-204ENST00000554607 PGAM2P15259 253 aa17.41■□□□□ 0.38
FOXA1-204ENST00000554607 TGFBR1P36897 503 aa17.41■□□□□ 0.38
FOXA1-204ENST00000554607 MLANAQ16655 118 aa17.41■□□□□ 0.38
FOXA1-204ENST00000554607 LGALS9BQ3B8N2 356 aa17.41■□□□□ 0.38
FOXA1-204ENST00000554607 RPS10-NUDT3A0A1W2PQS6 291 aa17.4■□□□□ 0.38
FOXA1-204ENST00000554607 M0R2N4 97 aa17.4■□□□□ 0.38
FOXA1-204ENST00000554607 IGKV1-17P01599 117 aa17.4■□□□□ 0.38
FOXA1-204ENST00000554607 SNRPD3P62318 126 aaKnown RBP17.4■□□□□ 0.38
FOXA1-204ENST00000554607 TIGITQ495A1 244 aa17.4■□□□□ 0.38
FOXA1-204ENST00000554607 Q8WTZ3 238 aa17.4■□□□□ 0.38
FOXA1-204ENST00000554607 SEPSECSQ9HD40 501 aaKnown RBP17.4■□□□□ 0.38
FOXA1-204ENST00000554607 MUC4Q99102 2169 aa17.4■□□□□ 0.38
FOXA1-204ENST00000554607 DNAH11Q96DT5 4516 aa17.39■□□□□ 0.37
FOXA1-204ENST00000554607 HNRNPCP07910 306 aaKnown RBP eCLIP17.39■□□□□ 0.37
FOXA1-204ENST00000554607 PIGPP57054 158 aa17.39■□□□□ 0.37
FOXA1-204ENST00000554607 C16orf54Q6UWD8 224 aa17.39■□□□□ 0.37
FOXA1-204ENST00000554607 SNX29P2Q8IUI4 249 aa17.39■□□□□ 0.37
FOXA1-204ENST00000554607 RRNAD1Q96FB5 475 aaKnown RBP17.39■□□□□ 0.37
FOXA1-204ENST00000554607 TP53RKQ96S44 253 aa17.39■□□□□ 0.37
FOXA1-204ENST00000554607 APOA1P02647 267 aa17.38■□□□□ 0.37
FOXA1-204ENST00000554607 BSXQ3C1V8 233 aa17.38■□□□□ 0.37
FOXA1-204ENST00000554607 OR1S2Q8NGQ3 325 aa17.38■□□□□ 0.37
FOXA1-204ENST00000554607 GLMPQ8WWB7 406 aa17.38■□□□□ 0.37
FOXA1-204ENST00000554607 XCL2Q9UBD3 114 aa17.38■□□□□ 0.37
FOXA1-204ENST00000554607 C3orf85A0A1B0GTC6 90 aa17.37■□□□□ 0.37
FOXA1-204ENST00000554607 IFNA10P01566 189 aa17.37■□□□□ 0.37
FOXA1-204ENST00000554607 IFNA21P01568 189 aa17.37■□□□□ 0.37
FOXA1-204ENST00000554607 PI3P19957 117 aa17.37■□□□□ 0.37
FOXA1-204ENST00000554607 TRIM16LQ309B1 348 aa17.37■□□□□ 0.37
FOXA1-204ENST00000554607 COMMD3Q9UBI1 195 aa17.37■□□□□ 0.37
FOXA1-204ENST00000554607 M0QYG6 137 aa17.36■□□□□ 0.37
FOXA1-204ENST00000554607 SPART-AS1P0CW21 52 aa17.36■□□□□ 0.37
FOXA1-204ENST00000554607 HTR2BP41595 481 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms