RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 HIST3H2BBQ8N257 126 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 SIGLECL1Q8N7X8 197 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 WFDC5Q8TCV5 224 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 SPACA4Q8TDM5 124 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 SLAMF6Q96DU3 332 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 HSPB9Q9BQS6 159 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 IMUPQ9GZP8 106 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 MIXL1Q9H2W2 232 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 ACER3Q9NUN7 267 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 KIF24Q5T7B8 1368 aa1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 H7C1C5 153 aa1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 PGLYRP1O75594 196 aaPredicted RBP1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 NDUFC2O95298 119 aa1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 SHBGP04278 402 aa1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 S100A4P26447 101 aaKnown RBP1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 RNASE4P34096 147 aaKnown RBP1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 EIF2B2P49770 351 aaKnown RBP1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 LCN6P62502 163 aa1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 ERHP84090 104 aaKnown RBP1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 TSNQ15631 228 aaKnown RBP1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 LYRM7Q5U5X0 104 aa1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 DNAJC9Q8WXX5 260 aa1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 ZHX1-C8orf76Q96EF9 292 aa1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 LYSMD1Q96S90 227 aa1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 TIMM21Q9BVV7 248 aa1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 SSR3Q9UNL2 185 aa1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 PBRM1Q86U86 1689 aa1.85□□□□□ -2.11
LSM6P2-201ENST00000552208 ARHGAP32A7KAX9 2087 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 IGLV3-9A0A075B6K5 115 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 A0A1B0GV72 72 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 MEIS3P1A6NDR6 274 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 TMEM212A6NML5 194 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 HMSDA8MTL9 139 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 AIPO00170 330 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 GPR31O00270 319 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 CYB5BO43169 146 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 IDO1P14902 403 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 AQP4P55087 323 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 TMEM258P61165 79 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 TFAMQ00059 246 aaKnown RBP1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 RHEBQ15382 184 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 KRTAP5-5Q701N2 237 aaPredicted RBP1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 TRAPPC6BQ86SZ2 158 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 STX19Q8N4C7 294 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 ZCCHC13Q8WW36 166 aaKnown RBP1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 TMEM106AQ96A25 262 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 SERPINI1Q99574 410 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 DOHHQ9BU89 302 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 DDA1Q9BW61 102 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 TTTY12Q9BZ98 90 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 PBOV1Q9GZY1 135 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 MRPL40Q9NQ50 206 aaKnown RBP1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 OSTCQ9NRP0 149 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 CKLFQ9UBR5 152 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 BAIAP2Q9UQB8 552 aa1.84□□□□□ -2.11
LSM6P2-201ENST00000552208 DOCK6Q96HP0 2047 aa1.84□□□□□ -2.12
LSM6P2-201ENST00000552208 SMARCA4P51532 1647 aa1.84□□□□□ -2.12
LSM6P2-201ENST00000552208 MALRD1Q5VYJ5 2156 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 RTEL1-TNFRSF6BF6WH68 1400 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 YTHDC2Q9H6S0 1430 aaKnown RBP1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 A0A087X0T9 212 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 C1orf196B1AJZ1 125 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 CSN2P05814 226 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 COX6A1P12074 109 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 TMEM78Q5T7P6 136 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 PP632Q6XCG6 107 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 SMIM15Q7Z3B0 74 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 C10orf126Q8N4M7 172 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 C9orf163Q8N9P6 203 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 STAG3L4Q8TBR4 150 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 DCANP1Q8TF63 244 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 MED1Q15648 1581 aaPredicted RBP1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 ANKRD30AQ9BXX3 1397 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 CACNA1GO43497 2377 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 RIC1Q4ADV7 1423 aa1.83□□□□□ -2.12
LSM6P2-201ENST00000552208 IBA57-AS1B1ANH7 110 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 H3BRN7 92 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 J3QQQ9 107 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 M0R378 163 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 CTSDP07339 412 aaPredicted RBP1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 HTR1AP08908 422 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 TRGC1P0CF51 173 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 CRYGAP11844 174 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 GLRXP35754 106 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 RPL26P61254 145 aaKnown RBP1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 NNATQ16517 81 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 LCN15Q6UWW0 184 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 DEFB128Q7Z7B8 93 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 TAC4Q86UU9 113 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 DHFR2Q86XF0 187 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 TMEM86AQ8N2M4 240 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 ZNF439Q8NDP4 499 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 OR5A1Q8NGJ0 315 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 OR8D4Q8NGM9 314 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 PLEKHB2Q96CS7 222 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 TXNDC17Q9BRA2 123 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 EPDR1Q9UM22 224 aa1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 RPL26L1Q9UNX3 145 aaKnown RBP1.82□□□□□ -2.12
LSM6P2-201ENST00000552208 TONSLQ96HA7 1378 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms