RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 MARC2Q969Z3 335 aa7.3□□□□□ -1.24
HDAC7-229ENST00000549883 RNF2Q99496 336 aa7.3□□□□□ -1.24
HDAC7-229ENST00000549883 TXN2Q99757 166 aa7.3□□□□□ -1.24
HDAC7-229ENST00000549883 FAM110AQ9BQ89 295 aa7.3□□□□□ -1.24
HDAC7-229ENST00000549883 ZFAND3Q9H8U3 227 aa7.3□□□□□ -1.24
HDAC7-229ENST00000549883 ENY2Q9NPA8 101 aa7.3□□□□□ -1.24
HDAC7-229ENST00000549883 HEYLQ9NQ87 328 aaPredicted RBP7.3□□□□□ -1.24
HDAC7-229ENST00000549883 SMPXQ9UHP9 88 aa7.3□□□□□ -1.24
HDAC7-229ENST00000549883 FLVCR2Q9UPI3 526 aa7.3□□□□□ -1.24
HDAC7-229ENST00000549883 KCNIP3Q9Y2W7 256 aa7.3□□□□□ -1.24
HDAC7-229ENST00000549883 IGKV3-7A0A075B6H7 116 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 A0A0B4J2A0 478 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 IGHV7-4-1A0A0J9YVY3 117 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 C15orf62A8K5M9 175 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 K7EMT4 169 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 CHEK1O14757 476 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 SULT1A3P0DMM9 295 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 SULT1A4P0DMN0 295 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 VAMP1P23763 118 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 BTCP35070 178 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 OPRK1P41145 380 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 AP3S2P59780 193 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 ZNF124Q15973 351 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 TIGITQ495A1 244 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 TMEM128Q5BJH2 165 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 RBPMS2Q6ZRY4 209 aaKnown RBP7.29□□□□□ -1.24
HDAC7-229ENST00000549883 LGI3Q8N145 548 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 TMEM116Q8NCL8 245 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 DUSP18Q8NEJ0 188 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 OR10C1Q96KK4 312 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 SCGB3A2Q96PL1 93 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 RHPN1-AS1Q9BWJ2 59 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 RBKSQ9H477 322 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 SHPKQ9UHJ6 478 aa7.29□□□□□ -1.24
HDAC7-229ENST00000549883 PUS1Q9Y606 427 aaKnown RBP eCLIP7.29□□□□□ -1.24
HDAC7-229ENST00000549883 AGRNO00468 2067 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 TRAV25A0A0B4J276 109 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 PITX3O75364 302 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 SFT2D2O95562 160 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 IGKV1-17P01599 117 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 HTR2BP41595 481 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 RND2P52198 227 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 SUB1P53999 127 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDAC7-229ENST00000549883 RELQ04864 619 aaPredicted RBP7.28□□□□□ -1.24
HDAC7-229ENST00000549883 TNFRSF9Q07011 255 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 SMCO1Q147U7 214 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 ODF3L2Q3SX64 289 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 C2orf83Q53S99 150 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 PRSS54Q6PEW0 395 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 SLC24A4Q8NFF2 622 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 OR4X1Q8NH49 305 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 ST8SIA2Q92186 375 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 HIPK2Q9H2X6 1198 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 ZMAT4Q9H898 229 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 GAR1Q9NY12 217 aaKnown RBP7.28□□□□□ -1.24
HDAC7-229ENST00000549883 HSPB7Q9UBY9 170 aa7.28□□□□□ -1.24
HDAC7-229ENST00000549883 NBEAL2Q6ZNJ1 2754 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 TRAV14DV4A0A0A6YYC5 116 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 MPTX1A8MV57 137 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 TSPAN4O14817 238 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 PLA2G10O15496 165 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 CLN5O75503 358 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 IL7P13232 177 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 NPY1RP25929 384 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 NPBWR1P48145 328 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 TFPI2P48307 235 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 TRIQKQ629K1 86 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 FAM90A2PQ658T7 463 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 SLC16A13Q7RTY0 426 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 CENPSQ8N2Z9 138 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 GBGT1Q8N5D6 347 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 OR1S1Q8NH92 325 aa7.27□□□□□ -1.25
HDAC7-229ENST00000549883 SPAG8Q99932 426 aaPredicted RBP7.27□□□□□ -1.25
HDAC7-229ENST00000549883 SLC25A21Q9BQT8 299 aaPredicted RBP7.27□□□□□ -1.25
HDAC7-229ENST00000549883 C9orf170A2RU37 121 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 CORTO00230 105 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 ADAP1O75689 374 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 DFFBO76075 338 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 NDUFB6O95139 128 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 HOXB5P09067 269 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 IGLC1P0CG04 106 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 IAPPP10997 89 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 ANXA3P12429 323 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 ANXA7P20073 488 aaKnown RBP7.26□□□□□ -1.25
HDAC7-229ENST00000549883 SRPXP78539 464 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 RBMS2Q15434 407 aaKnown RBP7.26□□□□□ -1.25
HDAC7-229ENST00000549883 GGNBP1Q5YKI7 109 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 ZNF600Q6ZNG1 722 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 TCF24Q7RTU0 167 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 APRG1Q8IVJ8 170 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 FAM24BQ8N5W8 94 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 LRTM2Q8N967 370 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 DTD1Q8TEA8 209 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 NPIPB3Q92617 1050 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 SPATA25Q9BR10 227 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 MAGT1Q9H0U3 335 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 VSIRQ9H7M9 311 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 EDA2RQ9HAV5 297 aa7.26□□□□□ -1.25
HDAC7-229ENST00000549883 IFNA10P01566 189 aa7.25□□□□□ -1.25
HDAC7-229ENST00000549883 INPP1P49441 399 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 285.5 ms