RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 YIF1AO95070 293 aa8.92□□□□□ -0.98
RAB5C-204ENST00000547517 SCAF4O95104 1147 aaKnown RBP8.92□□□□□ -0.98
RAB5C-204ENST00000547517 FRMD6-AS1P0C7T7 363 aa8.92□□□□□ -0.98
RAB5C-204ENST00000547517 IGHV4-30-4P0DP06 118 aa8.92□□□□□ -0.98
RAB5C-204ENST00000547517 ANXA7P20073 488 aaKnown RBP8.92□□□□□ -0.98
RAB5C-204ENST00000547517 NPY1RP25929 384 aa8.92□□□□□ -0.98
RAB5C-204ENST00000547517 NPBWR1P48145 328 aa8.92□□□□□ -0.98
RAB5C-204ENST00000547517 ELLP55199 621 aaPredicted RBP8.92□□□□□ -0.98
RAB5C-204ENST00000547517 CD81P60033 236 aa8.92□□□□□ -0.98
RAB5C-204ENST00000547517 LRTM2Q8N967 370 aa8.92□□□□□ -0.98
RAB5C-204ENST00000547517 MARC2Q969Z3 335 aa8.92□□□□□ -0.98
RAB5C-204ENST00000547517 ZNF414Q96IQ9 312 aa8.92□□□□□ -0.98
RAB5C-204ENST00000547517 WDR12Q9GZL7 423 aaKnown RBP8.92□□□□□ -0.98
RAB5C-204ENST00000547517 HIPK2Q9H2X6 1198 aa8.92□□□□□ -0.98
RAB5C-204ENST00000547517 RBKSQ9H477 322 aa8.92□□□□□ -0.98
RAB5C-204ENST00000547517 FNDC4Q9H6D8 234 aaPredicted RBP8.92□□□□□ -0.98
RAB5C-204ENST00000547517 HSPB7Q9UBY9 170 aa8.92□□□□□ -0.98
RAB5C-204ENST00000547517 CACFD1Q9UGQ2 172 aa8.92□□□□□ -0.98
RAB5C-204ENST00000547517 RPS10-NUDT3A0A1W2PQS6 291 aa8.91□□□□□ -0.98
RAB5C-204ENST00000547517 C9orf170A2RU37 121 aa8.91□□□□□ -0.98
RAB5C-204ENST00000547517 LYRM1O43325 122 aa8.91□□□□□ -0.98
RAB5C-204ENST00000547517 HOXB5P09067 269 aa8.91□□□□□ -0.98
RAB5C-204ENST00000547517 C8orf88P0DMB2 117 aa8.91□□□□□ -0.98
RAB5C-204ENST00000547517 UBE2MP61081 183 aaKnown RBP8.91□□□□□ -0.98
RAB5C-204ENST00000547517 C2orf83Q53S99 150 aa8.91□□□□□ -0.98
RAB5C-204ENST00000547517 DTD1Q8TEA8 209 aa8.91□□□□□ -0.98
RAB5C-204ENST00000547517 CCDC32Q9BV29 185 aa8.91□□□□□ -0.98
RAB5C-204ENST00000547517 C20orf85Q9H1P6 137 aa8.91□□□□□ -0.98
RAB5C-204ENST00000547517 MRPL36Q9P0J6 103 aaKnown RBP8.91□□□□□ -0.98
RAB5C-204ENST00000547517 MRPL27Q9P0M9 148 aaKnown RBP8.91□□□□□ -0.98
RAB5C-204ENST00000547517 TMED3Q9Y3Q3 217 aa8.91□□□□□ -0.98
RAB5C-204ENST00000547517 C15orf62A8K5M9 175 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 ZNF785A8K8V0 405 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 PLA2G10O15496 165 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 IFNA10P01566 189 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 CD7P09564 240 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 OR4E1P0C645 316 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 DHRS2Q13268 280 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 ZNF846Q147U1 533 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 MLANAQ16655 118 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 C4orf46Q504U0 113 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 LYG2Q86SG7 212 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 COQ8AQ8NI60 647 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 TMEM170AQ8WVE7 144 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 NEURL2Q9BR09 285 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 WFDC10AQ9H1F0 79 aa8.9□□□□□ -0.98
RAB5C-204ENST00000547517 COL7A1Q02388 2944 aa8.89□□□□□ -0.99
RAB5C-204ENST00000547517 IGHV3-49A0A0A0MS15 119 aa8.89□□□□□ -0.99
RAB5C-204ENST00000547517 K7EMT4 169 aa8.89□□□□□ -0.99
RAB5C-204ENST00000547517 PITX3O75364 302 aa8.89□□□□□ -0.99
RAB5C-204ENST00000547517 CLN5O75503 358 aa8.89□□□□□ -0.99
RAB5C-204ENST00000547517 SCGB2A1O75556 95 aa8.89□□□□□ -0.99
RAB5C-204ENST00000547517 ADAP1O75689 374 aa8.89□□□□□ -0.99
RAB5C-204ENST00000547517 NHLRC4P0CG21 123 aaPredicted RBP8.89□□□□□ -0.99
RAB5C-204ENST00000547517 IAPPP10997 89 aa8.89□□□□□ -0.99
RAB5C-204ENST00000547517 RND2P52198 227 aa8.89□□□□□ -0.99
RAB5C-204ENST00000547517 GGNBP1Q5YKI7 109 aa8.89□□□□□ -0.99
RAB5C-204ENST00000547517 ZNF600Q6ZNG1 722 aa8.89□□□□□ -0.99
RAB5C-204ENST00000547517 RBPMS2Q6ZRY4 209 aaKnown RBP8.89□□□□□ -0.99
RAB5C-204ENST00000547517 SBSPONQ8IVN8 264 aa8.89□□□□□ -0.99
RAB5C-204ENST00000547517 OR4X1Q8NH49 305 aa8.89□□□□□ -0.99
RAB5C-204ENST00000547517 RNASEH2CQ8TDP1 164 aaKnown RBP8.89□□□□□ -0.99
RAB5C-204ENST00000547517 TUBA4BQ9H853 241 aa8.89□□□□□ -0.99
RAB5C-204ENST00000547517 PUS1Q9Y606 427 aaKnown RBP eCLIP8.89□□□□□ -0.99
RAB5C-204ENST00000547517 HUWE1Q7Z6Z7 4374 aaKnown RBP8.88□□□□□ -0.99
RAB5C-204ENST00000547517 IGHV7-4-1A0A0J9YVY3 117 aa8.88□□□□□ -0.99
RAB5C-204ENST00000547517 TMEM50AO95807 157 aa8.88□□□□□ -0.99
RAB5C-204ENST00000547517 SLC25A6P12236 298 aa8.88□□□□□ -0.99
RAB5C-204ENST00000547517 TOMM20LQ6UXN7 152 aa8.88□□□□□ -0.99
RAB5C-204ENST00000547517 SLC16A13Q7RTY0 426 aa8.88□□□□□ -0.99
RAB5C-204ENST00000547517 NOXA1Q86UR1 476 aa8.88□□□□□ -0.99
RAB5C-204ENST00000547517 OR52B4Q8NGK2 314 aa8.88□□□□□ -0.99
RAB5C-204ENST00000547517 OR10C1Q96KK4 312 aa8.88□□□□□ -0.99
RAB5C-204ENST00000547517 GINS3Q9BRX5 216 aa8.88□□□□□ -0.99
RAB5C-204ENST00000547517 ZFAND3Q9H8U3 227 aa8.88□□□□□ -0.99
RAB5C-204ENST00000547517 C19orf73Q9NVV2 129 aa8.88□□□□□ -0.99
RAB5C-204ENST00000547517 U3KQ87 197 aa8.88□□□□□ -0.99
RAB5C-204ENST00000547517 U3KQK5 164 aa8.88□□□□□ -0.99
RAB5C-204ENST00000547517 TRAV6A0A075B6T7 132 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 IGHV3OR16-13A0A075B7E8 117 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 IGHV3-74A0A0B4J1X5 117 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 TRAV25A0A0B4J276 109 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 MPTX1A8MV57 137 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 A8MZ25 164 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 FAM90A26D6RGX4 464 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 IFNA4P05014 189 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 SLC25A4P12235 298 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 RGS21Q2M5E4 152 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 TIGITQ495A1 244 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 ETFRF1Q6IPR1 90 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 PRSS54Q6PEW0 395 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 DEFB125Q8N687 156 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 TMEM116Q8NCL8 245 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 ACY3Q96HD9 319 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 SPAG8Q99932 426 aaPredicted RBP8.87□□□□□ -0.99
RAB5C-204ENST00000547517 RHPN1-AS1Q9BWJ2 59 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 MAGT1Q9H0U3 335 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 SRD5A3Q9H8P0 318 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 NUDT15Q9NV35 164 aa8.87□□□□□ -0.99
RAB5C-204ENST00000547517 SMPXQ9UHP9 88 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms