RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 ARSJQ5FYB0 599 aaPredicted RBP12.5□□□□□ -0.41
XRCC1-202ENST00000543982 UNQ5815/PRO19632Q6UWF5 114 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 BTNL8Q6UX41 500 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 TTC9CQ8N5M4 171 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 ZNF702PQ9H963 129 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 NPVFQ9HCQ7 196 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 F11RQ9Y624 299 aaKnown RBP12.5□□□□□ -0.41
XRCC1-202ENST00000543982 ANKRD34BA5PLL1 514 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 FNDC10F2Z333 226 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 M0QZK8 103 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 MPDU1O75352 247 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 SUB1P53999 127 aaKnown RBP eCLIP12.5□□□□□ -0.41
XRCC1-202ENST00000543982 ZNF616Q08AN1 781 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 TREML4Q6UXN2 200 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 DPPA3Q6W0C5 159 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 SLC35E3Q7Z769 313 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 ZNF114Q8NC26 417 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 FAM213BQ8TBF2 198 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 NPCDR1Q9BY65 106 aa12.5□□□□□ -0.41
XRCC1-202ENST00000543982 SMCO3A2RU48 225 aa12.49□□□□□ -0.41
XRCC1-202ENST00000543982 FAM181BA6NEQ2 426 aa12.49□□□□□ -0.41
XRCC1-202ENST00000543982 C10orf99Q6UWK7 81 aa12.49□□□□□ -0.41
XRCC1-202ENST00000543982 RBMS3Q6XE24 437 aaKnown RBP12.49□□□□□ -0.41
XRCC1-202ENST00000543982 IL34Q6ZMJ4 242 aa12.49□□□□□ -0.41
XRCC1-202ENST00000543982 OR1P1Q8NH06 330 aa12.49□□□□□ -0.41
XRCC1-202ENST00000543982 OR2T6Q8NHC8 308 aa12.49□□□□□ -0.41
XRCC1-202ENST00000543982 SRSF8Q9BRL6 282 aaKnown RBP12.49□□□□□ -0.41
XRCC1-202ENST00000543982 RAB19A4D1S5 217 aa12.49□□□□□ -0.41
XRCC1-202ENST00000543982 NPIPB5A8MRT5 1133 aa12.49□□□□□ -0.41
XRCC1-202ENST00000543982 TMEM86BQ8N661 226 aa12.49□□□□□ -0.41
XRCC1-202ENST00000543982 ZNF709Q8N972 641 aa12.49□□□□□ -0.41
XRCC1-202ENST00000543982 MISP3Q96FF7 219 aa12.49□□□□□ -0.41
XRCC1-202ENST00000543982 S4R3C0 116 aa12.49□□□□□ -0.41
XRCC1-202ENST00000543982 C17orf112F2Z3M2 114 aa12.48□□□□□ -0.41
XRCC1-202ENST00000543982 IGF1P05019 195 aa12.48□□□□□ -0.41
XRCC1-202ENST00000543982 CRIP2P52943 208 aaPredicted RBP12.48□□□□□ -0.41
XRCC1-202ENST00000543982 RNASEH2CQ8TDP1 164 aaKnown RBP12.48□□□□□ -0.41
XRCC1-202ENST00000543982 TRAV41A0A0B4J266 112 aa12.47□□□□□ -0.41
XRCC1-202ENST00000543982 I3L521 148 aa12.47□□□□□ -0.41
XRCC1-202ENST00000543982 CRLF1O75462 422 aa12.47□□□□□ -0.41
XRCC1-202ENST00000543982 TSPAN15O95858 294 aa12.47□□□□□ -0.41
XRCC1-202ENST00000543982 AKIRIN2Q53H80 203 aa12.47□□□□□ -0.41
XRCC1-202ENST00000543982 CACNG8Q8WXS5 425 aa12.47□□□□□ -0.41
XRCC1-202ENST00000543982 RPRMQ9NS64 109 aa12.47□□□□□ -0.41
XRCC1-202ENST00000543982 LSM4Q9Y4Z0 139 aaKnown RBP12.47□□□□□ -0.41
XRCC1-202ENST00000543982 IGLV11-55A0A075B6I3 123 aa12.47□□□□□ -0.41
XRCC1-202ENST00000543982 PPIFP30405 207 aaKnown RBP12.47□□□□□ -0.41
XRCC1-202ENST00000543982 CD69Q07108 199 aa12.47□□□□□ -0.41
XRCC1-202ENST00000543982 GAMTQ14353 236 aa12.47□□□□□ -0.41
XRCC1-202ENST00000543982 LCNL1Q6ZST4 164 aa12.47□□□□□ -0.41
XRCC1-202ENST00000543982 MS4A10Q96PG2 267 aa12.47□□□□□ -0.41
XRCC1-202ENST00000543982 I3L2K1 104 aa12.46□□□□□ -0.41
XRCC1-202ENST00000543982 K7EIM0 57 aa12.46□□□□□ -0.41
XRCC1-202ENST00000543982 NDUFB8O95169 186 aa12.46□□□□□ -0.41
XRCC1-202ENST00000543982 H2AFB1P0C5Y9 115 aa12.46□□□□□ -0.41
XRCC1-202ENST00000543982 DEFA4P12838 97 aa12.46□□□□□ -0.41
XRCC1-202ENST00000543982 GPX4P36969 197 aaPredicted RBP12.46□□□□□ -0.41
XRCC1-202ENST00000543982 HILS1P60008 231 aa12.46□□□□□ -0.41
XRCC1-202ENST00000543982 TMEM41BQ5BJD5 291 aa12.46□□□□□ -0.41
XRCC1-202ENST00000543982 TEPPQ6URK8 271 aa12.46□□□□□ -0.41
XRCC1-202ENST00000543982 UQCC3Q6UW78 93 aa12.46□□□□□ -0.41
XRCC1-202ENST00000543982 ZNF329Q86UD4 541 aa12.46□□□□□ -0.41
XRCC1-202ENST00000543982 FAM110DQ8TAY7 271 aaPredicted RBP12.46□□□□□ -0.41
XRCC1-202ENST00000543982 VSIRQ9H7M9 311 aa12.46□□□□□ -0.41
XRCC1-202ENST00000543982 NIPBLQ6KC79 2804 aaeCLIP12.46□□□□□ -0.42
XRCC1-202ENST00000543982 IGKV1OR2-108A0A075B7D4 117 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 OR2J3O76001 311 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 MT-CO2P00403 227 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 MBP02144 154 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 ELLP55199 621 aaPredicted RBP12.45□□□□□ -0.42
XRCC1-202ENST00000543982 CFHR3Q02985 330 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 AKR1C1Q04828 323 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 ACSM6Q6P461 480 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 TMEM144Q7Z5S9 345 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 COMMD1Q8N668 190 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 MGST2Q99735 147 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 KLK15Q9H2R5 256 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 CLDN34H7C241 214 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 OPRK1P41145 380 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 TOR2AQ5JU69 321 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 Q6ZSV7 163 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 SLC16A13Q7RTY0 426 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 Q8N2B8 174 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 PRSS22Q9GZN4 317 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 NPFFR1Q9GZQ6 430 aa12.45□□□□□ -0.42
XRCC1-202ENST00000543982 AGPAT2O15120 278 aa12.44□□□□□ -0.42
XRCC1-202ENST00000543982 IGHV3-23P01764 117 aa12.44□□□□□ -0.42
XRCC1-202ENST00000543982 RAB31Q13636 194 aa12.44□□□□□ -0.42
XRCC1-202ENST00000543982 FFAR4Q5NUL3 377 aa12.44□□□□□ -0.42
XRCC1-202ENST00000543982 ZNF418Q8TF45 676 aaPredicted RBP12.44□□□□□ -0.42
XRCC1-202ENST00000543982 GGTLC1Q9BX51 225 aa12.44□□□□□ -0.42
XRCC1-202ENST00000543982 SERTAD4Q9NUC0 356 aa12.44□□□□□ -0.42
XRCC1-202ENST00000543982 TRBV9A0A0B4J1U6 114 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 AP4M1O00189 453 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 RNASE1P07998 156 aaKnown RBP12.43□□□□□ -0.42
XRCC1-202ENST00000543982 SPSB3Q6PJ21 355 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 RPP25LQ8N5L8 163 aaKnown RBP12.43□□□□□ -0.42
XRCC1-202ENST00000543982 SFT2D1Q8WV19 159 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 NPIPB3Q92617 1050 aa12.43□□□□□ -0.42
XRCC1-202ENST00000543982 ZNF355PQ9NSJ1 428 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms