RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 MLANAQ16655 118 aa8.72□□□□□ -1.01
GABPB1-206ENST00000543881 SMUG1Q53HV7 270 aa8.72□□□□□ -1.01
GABPB1-206ENST00000543881 FAAP20Q6NZ36 180 aa8.72□□□□□ -1.01
GABPB1-206ENST00000543881 Q6ZRM9 215 aa8.72□□□□□ -1.01
GABPB1-206ENST00000543881 GBGT1Q8N5D6 347 aa8.72□□□□□ -1.01
GABPB1-206ENST00000543881 STPG3Q8N7X2 389 aa8.72□□□□□ -1.01
GABPB1-206ENST00000543881 MARCH1Q8TCQ1 289 aa8.72□□□□□ -1.01
GABPB1-206ENST00000543881 GALNT14Q96FL9 552 aa8.72□□□□□ -1.01
GABPB1-206ENST00000543881 ZFAND3Q9H8U3 227 aa8.72□□□□□ -1.01
GABPB1-206ENST00000543881 A0A1B0GU03 582 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 RAB3DO95716 219 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 TMEM50AO95807 157 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 IFNA17P01571 189 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 SNCAP37840 140 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 ALDH3B2P48448 385 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 TAS2R19P59542 299 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 CTAG1AP78358 180 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 TRIM16LQ309B1 348 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 SCGB2B2Q4G0G5 96 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 STEAP1BQ6NZ63 245 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 TMEM217Q8N7C4 229 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 SLC35G3Q8N808 338 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 DUSP18Q8NEJ0 188 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 ZFAND1Q8TCF1 268 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 ST8SIA2Q92186 375 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 FNDC4Q9H6D8 234 aaPredicted RBP8.71□□□□□ -1.01
GABPB1-206ENST00000543881 VSIRQ9H7M9 311 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 COPZ2Q9P299 210 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 RABL2BQ9UNT1 228 aa8.71□□□□□ -1.01
GABPB1-206ENST00000543881 PUS1Q9Y606 427 aaKnown RBP eCLIP8.71□□□□□ -1.01
GABPB1-206ENST00000543881 IGHV3-66A0A0C4DH42 116 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 GABARAPH6UMI1 98 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 NPBWR1P48145 328 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 PRR20EP86478 221 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 PRR20CP86479 221 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 PRR20DP86480 221 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 PRR20BP86481 221 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 PRR20AP86496 221 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 ZNF600Q6ZNG1 722 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 TCF24Q7RTU0 167 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 CCDC71LQ8N9Z2 235 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 LHFPL5Q8TAF8 219 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 RTBDNQ9BSG5 229 aaPredicted RBP8.7□□□□□ -1.02
GABPB1-206ENST00000543881 RGS5O15539 181 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 DFFBO76075 338 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 ATG12O94817 140 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 OR5AC1P0C628 307 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 HOXA1P49639 335 aaPredicted RBP8.7□□□□□ -1.02
GABPB1-206ENST00000543881 BSXQ3C1V8 233 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 FAM24BQ8N5W8 94 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 GLYATL2Q8WU03 294 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 C15orf40Q8WUR7 153 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 GINS3Q9BRX5 216 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 TMEM222Q9H0R3 208 aa8.7□□□□□ -1.02
GABPB1-206ENST00000543881 CDS2O95674 445 aa8.69□□□□□ -1.02
GABPB1-206ENST00000543881 AARDQ4LEZ3 155 aa8.69□□□□□ -1.02
GABPB1-206ENST00000543881 GPR141Q7Z602 305 aa8.69□□□□□ -1.02
GABPB1-206ENST00000543881 SMIM4Q8WVI0 70 aa8.69□□□□□ -1.02
GABPB1-206ENST00000543881 RRNAD1Q96FB5 475 aaKnown RBP8.69□□□□□ -1.02
GABPB1-206ENST00000543881 PDCD10Q9BUL8 212 aa8.69□□□□□ -1.02
GABPB1-206ENST00000543881 MRPS26Q9BYN8 205 aaKnown RBP8.69□□□□□ -1.02
GABPB1-206ENST00000543881 CSTL1Q9H114 145 aa8.69□□□□□ -1.02
GABPB1-206ENST00000543881 MS4A6AQ9H2W1 248 aa8.69□□□□□ -1.02
GABPB1-206ENST00000543881 TEX13DA0A0J9YY54 714 aaPredicted RBP8.68□□□□□ -1.02
GABPB1-206ENST00000543881 CORTO00230 105 aa8.68□□□□□ -1.02
GABPB1-206ENST00000543881 CLN5O75503 358 aa8.68□□□□□ -1.02
GABPB1-206ENST00000543881 IGKV1-17P01599 117 aa8.68□□□□□ -1.02
GABPB1-206ENST00000543881 RPL5P46777 297 aaKnown RBP8.68□□□□□ -1.02
GABPB1-206ENST00000543881 SUB1P53999 127 aaKnown RBP eCLIP8.68□□□□□ -1.02
GABPB1-206ENST00000543881 CMC4P56277 68 aaPredicted RBP8.68□□□□□ -1.02
GABPB1-206ENST00000543881 SSBP1Q04837 148 aaKnown RBP8.68□□□□□ -1.02
GABPB1-206ENST00000543881 SELENOHQ8IZQ5 122 aaKnown RBP8.68□□□□□ -1.02
GABPB1-206ENST00000543881 OR4C16Q8NGL9 310 aa8.68□□□□□ -1.02
GABPB1-206ENST00000543881 OR4X1Q8NH49 305 aa8.68□□□□□ -1.02
GABPB1-206ENST00000543881 RNASE11Q8TAA1 199 aaKnown RBP8.68□□□□□ -1.02
GABPB1-206ENST00000543881 GPR146Q96CH1 333 aa8.68□□□□□ -1.02
GABPB1-206ENST00000543881 C6orf62Q9GZU0 229 aaPredicted RBP8.68□□□□□ -1.02
GABPB1-206ENST00000543881 RBM38Q9H0Z9 239 aaKnown RBP8.68□□□□□ -1.02
GABPB1-206ENST00000543881 NAA60Q9H7X0 242 aa8.68□□□□□ -1.02
GABPB1-206ENST00000543881 PRELID1Q9Y255 219 aa8.68□□□□□ -1.02
GABPB1-206ENST00000543881 MPTX1A8MV57 137 aa8.67□□□□□ -1.02
GABPB1-206ENST00000543881 B3GALNT1O75752 331 aa8.67□□□□□ -1.02
GABPB1-206ENST00000543881 OPRK1P41145 380 aa8.67□□□□□ -1.02
GABPB1-206ENST00000543881 DEFB131AP59861 70 aa8.67□□□□□ -1.02
GABPB1-206ENST00000543881 SPCS3P61009 180 aa8.67□□□□□ -1.02
GABPB1-206ENST00000543881 PAFAH1B2P68402 229 aa8.67□□□□□ -1.02
GABPB1-206ENST00000543881 MRPS10P82664 201 aaKnown RBP8.67□□□□□ -1.02
GABPB1-206ENST00000543881 MEF2DQ14814 521 aa8.67□□□□□ -1.02
GABPB1-206ENST00000543881 LEMD1Q68G75 181 aa8.67□□□□□ -1.02
GABPB1-206ENST00000543881 FAM219AQ8IW50 185 aa8.67□□□□□ -1.02
GABPB1-206ENST00000543881 DYNC2LI1Q8TCX1 351 aa8.67□□□□□ -1.02
GABPB1-206ENST00000543881 ENY2Q9NPA8 101 aa8.67□□□□□ -1.02
GABPB1-206ENST00000543881 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.67□□□□□ -1.02
GABPB1-206ENST00000543881 CACNG5Q9UF02 275 aa8.67□□□□□ -1.02
GABPB1-206ENST00000543881 GPR132Q9UNW8 380 aa8.67□□□□□ -1.02
GABPB1-206ENST00000543881 C14orf166Q9Y224 244 aaKnown RBP8.67□□□□□ -1.02
GABPB1-206ENST00000543881 VPS13DQ5THJ4 4388 aa8.66□□□□□ -1.02
GABPB1-206ENST00000543881 CRYM-AS1A6NIL9 109 aa8.66□□□□□ -1.02
GABPB1-206ENST00000543881 DISC1C4P0D8 188 aa8.66□□□□□ -1.02
GABPB1-206ENST00000543881 CTDSPLO15194 276 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms