RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 NPVFQ9HCQ7 196 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 KLK9Q9UKQ9 250 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 ANK3Q12955 4377 aaKnown RBP8.33□□□□□ -1.08
DDB1-221ENST00000543162 TMEM89A2RUT3 159 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 FAM223BA6NKX1 122 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 NDUFA7O95182 113 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 IGLV1-40P01703 118 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 FGF7P21781 194 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 RND2P52198 227 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 TPPP2P59282 170 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 DEFA5Q01523 94 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 ATP5G2Q06055 141 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 C15orf32Q32M92 178 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 ACSM6Q6P461 480 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 BTNL8Q6UX41 500 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 TREML4Q6UXN2 200 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 TMEM144Q7Z5S9 345 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 FAM223AQ8IWN6 122 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 BAP18Q8IXM2 172 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 HSD17B11Q8NBQ5 300 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 STOML3Q8TAV4 291 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 VN1R17PQ8TDU5 208 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 SCARB1Q8WTV0 552 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 NPIPB3Q92617 1050 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 CXorf58Q96LI9 332 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 TEP1Q99973 2627 aaKnown RBP8.33□□□□□ -1.08
DDB1-221ENST00000543162 PARD6GQ9BYG4 376 aaPredicted RBP8.33□□□□□ -1.08
DDB1-221ENST00000543162 WDR61Q9GZS3 305 aaKnown RBP8.33□□□□□ -1.08
DDB1-221ENST00000543162 C16orf95Q9H693 158 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 SLA2Q9H6Q3 261 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 WDR83OSQ9Y284 106 aa8.33□□□□□ -1.08
DDB1-221ENST00000543162 MFSD2BA6NFX1 497 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 MPDU1O75352 247 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 MDKP21741 143 aaPredicted RBP8.32□□□□□ -1.08
DDB1-221ENST00000543162 MFAP4P55083 255 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 SRSF2Q01130 221 aaKnown RBP8.32□□□□□ -1.08
DDB1-221ENST00000543162 FOXE3Q13461 319 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 RAB31Q13636 194 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 TEX38Q6PEX7 206 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 TEPPQ6URK8 271 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 COMMD1Q8N668 190 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 ZNF709Q8N972 641 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 TMEM116Q8NCL8 245 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 OR4F5Q8NH21 305 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 ST8SIA2Q92186 375 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 GNPNAT1Q96EK6 184 aaPredicted RBP8.32□□□□□ -1.08
DDB1-221ENST00000543162 GINS3Q9BRX5 216 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 ARV1Q9H2C2 271 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 KLK15Q9H2R5 256 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 C21orf62Q9NYP8 219 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 MRPL36Q9P0J6 103 aaKnown RBP8.32□□□□□ -1.08
DDB1-221ENST00000543162 S4R3C0 116 aa8.32□□□□□ -1.08
DDB1-221ENST00000543162 A0A0G2JLM5 398 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 ELANEP08246 267 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 PSMB8P28062 276 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 NPBWR1P48145 328 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 RAB9AP51151 201 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 RUNX1Q01196 453 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 Q56UQ5 140 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 EIF5AL1Q6IS14 154 aaKnown RBP8.31□□□□□ -1.08
DDB1-221ENST00000543162 C10orf99Q6UWK7 81 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 LCNL1Q6ZST4 164 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 KLHDC1Q8N7A1 406 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 OR4X1Q8NH49 305 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 LINC01006Q8NI28 216 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 EEF1AKMT3Q96AZ1 226 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 USMG5Q96IX5 58 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 RSG1Q9BU20 258 aa8.31□□□□□ -1.08
DDB1-221ENST00000543162 LSM4Q9Y4Z0 139 aaKnown RBP8.31□□□□□ -1.08
DDB1-221ENST00000543162 IGKV1OR2-108A0A075B7D4 117 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 TRBV7-1A0A0A6YYK4 115 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 ZFP92A6NM28 416 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 C17orf112F2Z3M2 114 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 AGPAT2O15120 278 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 GNG7O60262 68 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 CLN5O75503 358 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 SCGB2A1O75556 95 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 IGHV3-23P01764 117 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 ATP6V0CP27449 155 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 OR10J1P30954 320 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 CAMLGP49069 296 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 THAP8Q8NA92 274 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 OR5AU1Q8NGC0 362 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 ZNF502Q8TBZ5 544 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 PHYHIPLQ96FC7 376 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 MGST2Q99735 147 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 TXN2Q99757 166 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 NPCDR1Q9BY65 106 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 SH3BGRL3Q9H299 93 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 SLC25A32Q9H2D1 315 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 KCNIP2Q9NS61 270 aa8.3□□□□□ -1.08
DDB1-221ENST00000543162 GAR1Q9NY12 217 aaKnown RBP8.3□□□□□ -1.08
DDB1-221ENST00000543162 TRAV30A0A087WSZ9 112 aa8.29□□□□□ -1.08
DDB1-221ENST00000543162 CFDP00746 253 aaPredicted RBP8.29□□□□□ -1.08
DDB1-221ENST00000543162 RPLP1P05386 114 aaKnown RBP8.29□□□□□ -1.08
DDB1-221ENST00000543162 SEC11BP0C7V7 166 aa8.29□□□□□ -1.08
DDB1-221ENST00000543162 IGLC1P0CG04 106 aa8.29□□□□□ -1.08
DDB1-221ENST00000543162 SPP1P10451 314 aa8.29□□□□□ -1.08
DDB1-221ENST00000543162 FCGR2BP31994 310 aaPredicted RBP8.29□□□□□ -1.08
DDB1-221ENST00000543162 TEX261Q6UWH6 196 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms