RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 LAMA3Q16787 3333 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 CD5LO43866 347 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 OR2C1O95371 312 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 ADIRFQ15847 76 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 C10orf55Q5SWW7 151 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 PVRIGQ6DKI7 326 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 SPSB3Q6PJ21 355 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 CYP2G1PQ6ZSU1 146 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 RXFP4Q8TDU9 374 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 RPUSD4Q96CM3 377 aaKnown RBP6.29□□□□□ -1.4
LRP6-206ENST00000543091 MANBALQ9NQG1 85 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 ZNF292O60281 2723 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 GGCTO75223 188 aaKnown RBP6.29□□□□□ -1.4
LRP6-206ENST00000543091 IGHV3-23P01764 117 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 ZFP36P26651 326 aaKnown RBP6.29□□□□□ -1.4
LRP6-206ENST00000543091 RPS10P46783 165 aaKnown RBP6.29□□□□□ -1.4
LRP6-206ENST00000543091 ZNF137PP52743 207 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 DLX1P56177 255 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 RANP62826 216 aaKnown RBP6.29□□□□□ -1.4
LRP6-206ENST00000543091 MIC13Q5XKP0 118 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 TVP23CQ96ET8 276 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 TPPP3Q9BW30 176 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 ZNRD1Q9P1U0 126 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 PRRC2AP48634 2157 aaKnown RBP6.29□□□□□ -1.4
LRP6-206ENST00000543091 FAM223BA6NKX1 122 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 CLN5O75503 358 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 IGKV1-16P04430 117 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 ID3Q02535 119 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 OR5I1Q13606 314 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 TMEM144Q7Z5S9 345 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 FAM223AQ8IWN6 122 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 TBX15Q96SF7 602 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 SMIM7Q9BQ49 75 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 MRPL32Q9BYC8 188 aaKnown RBP6.29□□□□□ -1.4
LRP6-206ENST00000543091 S4R3C0 116 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 IGHV4-38-2P0DP08 117 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 CD69Q07108 199 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 C15orf32Q32M92 178 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 OR10J6PQ8NGY7 276 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 TMPRSS5Q9H3S3 457 aa6.29□□□□□ -1.4
LRP6-206ENST00000543091 B4DEV8 164 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 C8orf88P0DMB2 117 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 IGFBP2P18065 325 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 FOXL1Q12952 345 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 KLHL30-AS1Q8NEE0 82 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 OR5AU1Q8NGC0 362 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 CHD3Q12873 2000 aaKnown RBP6.28□□□□□ -1.4
LRP6-206ENST00000543091 TRBV7-1A0A0A6YYK4 115 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 IGHV4-59P01825 116 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 IGHV4-31P0DP07 118 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 RELBQ01201 579 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 PAX8Q06710 450 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 PNRC1Q12796 327 aaPredicted RBP6.28□□□□□ -1.4
LRP6-206ENST00000543091 C2orf83Q53S99 150 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 ZNF329Q86UD4 541 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 LYPD6Q86Y78 171 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 PIP4P2Q8N4L2 257 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 TUBA4BQ9H853 241 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 KIAA1549Q9HCM3 1950 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 OR2T8A6NH00 312 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 ZNF738Q8NE65 137 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 RAX2Q96IS3 184 aa6.28□□□□□ -1.4
LRP6-206ENST00000543091 F11RQ9Y624 299 aaKnown RBP6.28□□□□□ -1.4
LRP6-206ENST00000543091 FOXI3A8MTJ6 420 aaPredicted RBP6.27□□□□□ -1.4
LRP6-206ENST00000543091 PSG9Q00887 426 aa6.27□□□□□ -1.4
LRP6-206ENST00000543091 GAMTQ14353 236 aa6.27□□□□□ -1.4
LRP6-206ENST00000543091 FAM110DQ8TAY7 271 aaPredicted RBP6.27□□□□□ -1.4
LRP6-206ENST00000543091 SIRPDQ9H106 197 aa6.27□□□□□ -1.4
LRP6-206ENST00000543091 TRAV14DV4A0A0A6YYC5 116 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 IGKV1-5P01602 117 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 HLA-DRB1P01911 266 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 CD5P06127 495 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 RUNX1Q01196 453 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 TMEM78Q5T7P6 136 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 TMEM86BQ8N661 226 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 RSG1Q9BU20 258 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 WDR61Q9GZS3 305 aaKnown RBP6.27□□□□□ -1.41
LRP6-206ENST00000543091 CARHSP1Q9Y2V2 147 aaKnown RBP6.27□□□□□ -1.41
LRP6-206ENST00000543091 USP9YO00507 2555 aaPredicted RBP6.27□□□□□ -1.41
LRP6-206ENST00000543091 OR10W1Q8NGF6 305 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 PSMG3Q9BT73 122 aaPredicted RBP6.27□□□□□ -1.41
LRP6-206ENST00000543091 NCKAP5O14513 1909 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 ATP6V0E1O15342 81 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 ELANEP08246 267 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 TSPOP30536 169 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 ZNF134P52741 427 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 CMC4P56277 68 aaPredicted RBP6.27□□□□□ -1.41
LRP6-206ENST00000543091 NUTF2P61970 127 aaKnown RBP6.27□□□□□ -1.41
LRP6-206ENST00000543091 NMSQ5H8A3 153 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 PRR27Q6MZM9 219 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 GPR82Q96P67 336 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 NIT2Q9NQR4 276 aa6.27□□□□□ -1.41
LRP6-206ENST00000543091 FAM181BA6NEQ2 426 aa6.26□□□□□ -1.41
LRP6-206ENST00000543091 SUPT4H1P63272 117 aaKnown RBP6.26□□□□□ -1.41
LRP6-206ENST00000543091 DOCK11Q5JSL3 2073 aa6.26□□□□□ -1.41
LRP6-206ENST00000543091 SSX7Q7RTT5 188 aa6.26□□□□□ -1.41
LRP6-206ENST00000543091 ZNF295-AS1Q8N0V1 137 aa6.26□□□□□ -1.41
LRP6-206ENST00000543091 TXNDC17Q9BRA2 123 aa6.26□□□□□ -1.41
LRP6-206ENST00000543091 IGSF23A1L1A6 192 aa6.26□□□□□ -1.41
LRP6-206ENST00000543091 PPP1R2P9O14990 202 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms