RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 TDRD6O60522 2096 aaKnown RBP2.57□□□□□ -2
CSDE1-216ENST00000534389 ATG2BQ96BY7 2078 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 GTF3C1Q12789 2109 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 DOCK11Q5JSL3 2073 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 IGHV4OR15-8A0A075B7B6 117 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 A0A087WX48 190 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 TRAV38-1A0A0B4J264 116 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 CXorf51AA0A1B0GTR3 108 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 hCG_38984A0A1B0GV85 526 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 A0A1B0GW15 77 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 SMIM27A0A1W2PRY6 76 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 LRP5LA4QPB2 252 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 LRRC30A6NM36 301 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 H0YGG7 62 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 RER1O15258 196 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 ZNHIT1O43257 154 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 SPRY1O43609 319 aaPredicted RBP2.56□□□□□ -2
CSDE1-216ENST00000534389 PDE6DO43924 150 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 PDCD6O75340 191 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 RHBDL1O75783 438 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 OR2J3O76001 311 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 EML2O95834 649 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 NUDT14O95848 222 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 IGHV3-7P01780 117 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 HBZP02008 142 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 MT-ND6P03923 174 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 SCTP09683 121 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 LINC00271P0C7V0 271 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 P0C879 139 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 HIST1H1EP10412 219 aaKnown RBP2.56□□□□□ -2
CSDE1-216ENST00000534389 PSG2P11465 335 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 PVRP15151 417 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 USF1P22415 310 aaPredicted RBP2.56□□□□□ -2
CSDE1-216ENST00000534389 PRTN3P24158 256 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 CD24P25063 80 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 RPS12P25398 132 aaKnown RBP2.56□□□□□ -2
CSDE1-216ENST00000534389 FASLGP48023 281 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 DAP3P51398 398 aaKnown RBP2.56□□□□□ -2
CSDE1-216ENST00000534389 RPS18P62269 152 aaKnown RBP2.56□□□□□ -2
CSDE1-216ENST00000534389 RPL32P62910 135 aaKnown RBP2.56□□□□□ -2
CSDE1-216ENST00000534389 FUT7Q11130 342 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 FXYD3Q14802 87 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 ZNF146Q15072 292 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 OR8B8Q15620 311 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 PIGYQ3MUY2 71 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 SPANXN5Q5MJ07 72 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 LINC01545Q5VT33 79 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 RNASEKQ6P5S7 137 aaKnown RBP2.56□□□□□ -2
CSDE1-216ENST00000534389 PET117Q6UWS5 81 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 CXCL17Q6UXB2 119 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 FA2HQ7L5A8 372 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 DOLPP1Q86YN1 238 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 SMIM20Q8N5G0 67 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 TMEM251Q8N6I4 163 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 MRPL43Q8N983 215 aaKnown RBP2.56□□□□□ -2
CSDE1-216ENST00000534389 Q8N9P0 234 aaPredicted RBP2.56□□□□□ -2
CSDE1-216ENST00000534389 SMRP1Q8NCR6 262 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 OR13A1Q8NGR1 328 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 OR10X1Q8NGY0 326 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 OR10D3Q8NH80 312 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 OR10G6Q8NH81 332 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 OR2T6Q8NHC8 308 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 H1FXQ92522 213 aaKnown RBP2.56□□□□□ -2
CSDE1-216ENST00000534389 FGF14Q92915 247 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 PMCHL2Q9BQD1 86 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 TMEM70Q9BUB7 260 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 TMEM147Q9BVK8 224 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 HINT2Q9BX68 163 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 RNASE7Q9H1E1 156 aaKnown RBP2.56□□□□□ -2
CSDE1-216ENST00000534389 OR2D2Q9H210 308 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 MS4A6AQ9H2W1 248 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 METTL7AQ9H8H3 244 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 DEPPQ9NTK1 212 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 MRPL16Q9NX20 251 aaKnown RBP2.56□□□□□ -2
CSDE1-216ENST00000534389 MED29Q9NX70 200 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 MTCH1Q9NZJ7 389 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 COPS7AQ9UBW8 275 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 RABAC1Q9UI14 185 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 VPREB3Q9UKI3 123 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 ZNF257Q9Y2Q1 563 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 INSIG2Q9Y5U4 225 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 LY96Q9Y6Y9 160 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 R4GN57 208 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 SPACA6W5XKT8 324 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 OBSL1O75147 1896 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 MYOFQ9NZM1 2061 aa2.56□□□□□ -2
CSDE1-216ENST00000534389 TRGV10A0A0A0MS01 117 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 TMED7-TICAM2A0A0A6YYA0 188 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 IGHV1-24A0A0C4DH33 117 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 A0A1B0GXF2 115 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 A0A1W2PRD5 423 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 A0A1W2PRF3 423 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 A0A1W2PRM7 423 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 IZUMO1RA6ND01 250 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 A6NDN8 102 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 HELTA6NFD8 242 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 CD300LBA8K4G0 201 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 C9JCJ5 164 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 E9PLD3 99 aa2.55□□□□□ -2
CSDE1-216ENST00000534389 H3BMH7 237 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms