RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 A0A0D9SG52 128 aa9.21□□□□□ -0.94
CAPN1-223ENST00000533079 SRRM4A7MD48 611 aaKnown RBP9.21□□□□□ -0.94
CAPN1-223ENST00000533079 OR2C1O95371 312 aa9.21□□□□□ -0.94
CAPN1-223ENST00000533079 MPC2O95563 127 aa9.21□□□□□ -0.94
CAPN1-223ENST00000533079 IGLV2-14P01704 120 aa9.21□□□□□ -0.94
CAPN1-223ENST00000533079 IFNA4P05014 189 aa9.21□□□□□ -0.94
CAPN1-223ENST00000533079 ARL3P36405 182 aa9.21□□□□□ -0.94
CAPN1-223ENST00000533079 OR2F1Q13607 317 aa9.21□□□□□ -0.94
CAPN1-223ENST00000533079 ZNF345Q14585 488 aa9.21□□□□□ -0.94
CAPN1-223ENST00000533079 BTNL8Q6UX41 500 aa9.21□□□□□ -0.94
CAPN1-223ENST00000533079 C2CD4CQ8TF44 421 aa9.21□□□□□ -0.94
CAPN1-223ENST00000533079 SEC22AQ96IW7 307 aa9.21□□□□□ -0.94
CAPN1-223ENST00000533079 ADTRPQ96IZ2 230 aa9.21□□□□□ -0.94
CAPN1-223ENST00000533079 C11orf68Q9H3H3 251 aaKnown RBP9.21□□□□□ -0.94
CAPN1-223ENST00000533079 SDHAF2Q9NX18 166 aa9.21□□□□□ -0.94
CAPN1-223ENST00000533079 BOLA1Q9Y3E2 137 aa9.21□□□□□ -0.94
CAPN1-223ENST00000533079 DNAH6Q9C0G6 4158 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 FAT2Q9NYQ8 4349 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 NPIPB5A8MRT5 1133 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 CCSO14618 274 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 ADAP1O75689 374 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 OR2J3O76001 311 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 PET100P0DJ07 73 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 SLC25A6P12236 298 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 ELLP55199 621 aaPredicted RBP9.2□□□□□ -0.94
CAPN1-223ENST00000533079 PRR20EP86478 221 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 PRR20CP86479 221 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 PRR20DP86480 221 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 PRR20BP86481 221 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 PRR20AP86496 221 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 EIF4EBP1Q13541 118 aaPredicted RBP9.2□□□□□ -0.94
CAPN1-223ENST00000533079 GGNBP1Q5YKI7 109 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 ZNF767PQ75MW2 155 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 ZNF546Q86UE3 836 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 MMD2Q8IY49 270 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 ZNF645Q8N7E2 425 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 THAP6Q8TBB0 222 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 OR10C1Q96KK4 312 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 CCDC140Q96MF4 163 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 TP53RKQ96S44 253 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 RNF126Q9BV68 326 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 MRPL27Q9P0M9 148 aaKnown RBP9.2□□□□□ -0.94
CAPN1-223ENST00000533079 FBXL7Q9UJT9 491 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 TNFSF18Q9UNG2 199 aa9.2□□□□□ -0.94
CAPN1-223ENST00000533079 ZNF320A2RRD8 509 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 FAM25EA8MYX2 175 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 L7N2F9 121 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 HOXB5P09067 269 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 C8orf88P0DMB2 117 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 MYOD1P15172 320 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 CXCL2P19875 107 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 S100A11P31949 105 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 SP6Q3SY56 376 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 PRSS54Q6PEW0 395 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 ZNF66Q6ZN08 573 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 ACOT7LQ6ZUV0 252 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 LYZL2Q7Z4W2 148 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 SELENOHQ8IZQ5 122 aaKnown RBP9.19□□□□□ -0.94
CAPN1-223ENST00000533079 C11orf45Q8TAV5 145 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 LSM10Q969L4 123 aaKnown RBP9.19□□□□□ -0.94
CAPN1-223ENST00000533079 EEF1AKMT3Q96AZ1 226 aa9.19□□□□□ -0.94
CAPN1-223ENST00000533079 ZNF430Q9H8G1 570 aaPredicted RBP9.19□□□□□ -0.94
CAPN1-223ENST00000533079 A0A1B0GVY2 172 aa9.18□□□□□ -0.94
CAPN1-223ENST00000533079 TSPAN4O14817 238 aa9.18□□□□□ -0.94
CAPN1-223ENST00000533079 CRYZL1O95825 349 aa9.18□□□□□ -0.94
CAPN1-223ENST00000533079 SAA1P0DJI8 122 aaPredicted RBP9.18□□□□□ -0.94
CAPN1-223ENST00000533079 HIST1H1BP16401 226 aaKnown RBP9.18□□□□□ -0.94
CAPN1-223ENST00000533079 OPCMLQ14982 345 aa9.18□□□□□ -0.94
CAPN1-223ENST00000533079 NDUFA5Q16718 116 aa9.18□□□□□ -0.94
CAPN1-223ENST00000533079 IAH1Q2TAA2 248 aaPredicted RBP9.18□□□□□ -0.94
CAPN1-223ENST00000533079 KLK9Q2XQG4 91 aa9.18□□□□□ -0.94
CAPN1-223ENST00000533079 CLEC19AQ6UXS0 136 aa9.18□□□□□ -0.94
CAPN1-223ENST00000533079 TMUB2Q71RG4 321 aa9.18□□□□□ -0.94
CAPN1-223ENST00000533079 KCNRGQ8N5I3 272 aa9.18□□□□□ -0.94
CAPN1-223ENST00000533079 RBPMSQ93062 196 aaKnown RBP9.18□□□□□ -0.94
CAPN1-223ENST00000533079 MAP6D1Q9H9H5 199 aa9.18□□□□□ -0.94
CAPN1-223ENST00000533079 KLK9Q9UKQ9 250 aa9.18□□□□□ -0.94
CAPN1-223ENST00000533079 UFC1Q9Y3C8 167 aa9.18□□□□□ -0.94
CAPN1-223ENST00000533079 RBM7Q9Y580 266 aaKnown RBP9.18□□□□□ -0.94
CAPN1-223ENST00000533079 DNAH2Q9P225 4427 aa9.18□□□□□ -0.94
CAPN1-223ENST00000533079 ABCA13Q86UQ4 5058 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 FXYD6-FXYD2A0A087WZ82 144 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 TRBV7-1A0A0A6YYK4 115 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 MPTX1A8MV57 137 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 H0YIZ8 118 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 ARPC5O15511 151 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 RLN2P04090 185 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 SERPINE2P07093 398 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 CTRB1P17538 263 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 DUTP33316 252 aaKnown RBP9.17□□□□□ -0.94
CAPN1-223ENST00000533079 NMSQ5H8A3 153 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 TMEM268Q5VZI3 342 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 CTRB2Q6GPI1 263 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 INO80EQ8NBZ0 244 aaPredicted RBP9.17□□□□□ -0.94
CAPN1-223ENST00000533079 LHFPL5Q8TAF8 219 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 VSTM2AQ8TAG5 236 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 CD300LFQ8TDQ1 290 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 CXorf58Q96LI9 332 aa9.17□□□□□ -0.94
CAPN1-223ENST00000533079 HSD17B10Q99714 261 aaKnown RBP9.17□□□□□ -0.94
CAPN1-223ENST00000533079 PRR13Q9NZ81 148 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms