RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 GATAD1Q8WUU5 269 aa13.1□□□□□ -0.31
PCF11-206ENST00000533018 PHLDA1Q8WV24 401 aaPredicted RBP13.1□□□□□ -0.31
PCF11-206ENST00000533018 TMEM231Q9H6L2 316 aa13.1□□□□□ -0.31
PCF11-206ENST00000533018 A0A1B0GU03 582 aa13.09□□□□□ -0.31
PCF11-206ENST00000533018 INS-IGF2F8WCM5 200 aa13.09□□□□□ -0.31
PCF11-206ENST00000533018 RGS5O15539 181 aa13.09□□□□□ -0.31
PCF11-206ENST00000533018 CA1P00915 261 aaPredicted RBP13.09□□□□□ -0.31
PCF11-206ENST00000533018 P0C879 139 aa13.09□□□□□ -0.31
PCF11-206ENST00000533018 RNASE2P10153 161 aaKnown RBP13.09□□□□□ -0.31
PCF11-206ENST00000533018 NPPCP23582 126 aa13.09□□□□□ -0.31
PCF11-206ENST00000533018 DEFB131AP59861 70 aa13.09□□□□□ -0.31
PCF11-206ENST00000533018 STEAP1BQ6NZ63 245 aa13.09□□□□□ -0.31
PCF11-206ENST00000533018 TMEM229BQ8NBD8 167 aa13.09□□□□□ -0.31
PCF11-206ENST00000533018 TMEM230Q96A57 120 aa13.09□□□□□ -0.31
PCF11-206ENST00000533018 VSIRQ9H7M9 311 aa13.09□□□□□ -0.31
PCF11-206ENST00000533018 ZFAND3Q9H8U3 227 aa13.09□□□□□ -0.31
PCF11-206ENST00000533018 TEX13DA0A0J9YY54 714 aaPredicted RBP13.08□□□□□ -0.32
PCF11-206ENST00000533018 A0A1W2PS18 150 aa13.08□□□□□ -0.32
PCF11-206ENST00000533018 CLN5O75503 358 aa13.08□□□□□ -0.32
PCF11-206ENST00000533018 GABARAPO95166 117 aa13.08□□□□□ -0.32
PCF11-206ENST00000533018 MLANAQ16655 118 aa13.08□□□□□ -0.32
PCF11-206ENST00000533018 METTL26Q96S19 204 aa13.08□□□□□ -0.32
PCF11-206ENST00000533018 FBXL17Q9UF56 701 aa13.08□□□□□ -0.32
PCF11-206ENST00000533018 C14orf166Q9Y224 244 aaKnown RBP13.08□□□□□ -0.32
PCF11-206ENST00000533018 KMT2AQ03164 3969 aa13.07□□□□□ -0.32
PCF11-206ENST00000533018 A0A0G2JRQ6 117 aa13.07□□□□□ -0.32
PCF11-206ENST00000533018 CD74P04233 296 aa13.07□□□□□ -0.32
PCF11-206ENST00000533018 UCP1P25874 307 aa13.07□□□□□ -0.32
PCF11-206ENST00000533018 STHQ8IWL8 128 aa13.07□□□□□ -0.32
PCF11-206ENST00000533018 STXBP6Q8NFX7 210 aa13.07□□□□□ -0.32
PCF11-206ENST00000533018 C11orf45Q8TAV5 145 aa13.07□□□□□ -0.32
PCF11-206ENST00000533018 NARS2Q96I59 477 aaKnown RBP13.07□□□□□ -0.32
PCF11-206ENST00000533018 MRPL36Q9P0J6 103 aaKnown RBP13.07□□□□□ -0.32
PCF11-206ENST00000533018 AGRNO00468 2067 aa13.07□□□□□ -0.32
PCF11-206ENST00000533018 FRAS1Q86XX4 4008 aa13.07□□□□□ -0.32
PCF11-206ENST00000533018 GABARAPH6UMI1 98 aa13.06□□□□□ -0.32
PCF11-206ENST00000533018 DEFB4AO15263 64 aa13.06□□□□□ -0.32
PCF11-206ENST00000533018 B3GALNT1O75752 331 aa13.06□□□□□ -0.32
PCF11-206ENST00000533018 OR5AC1P0C628 307 aa13.06□□□□□ -0.32
PCF11-206ENST00000533018 NANOS2P60321 138 aaKnown RBP13.06□□□□□ -0.32
PCF11-206ENST00000533018 TMEM187Q14656 261 aa13.06□□□□□ -0.32
PCF11-206ENST00000533018 FAAP20Q6NZ36 180 aa13.06□□□□□ -0.32
PCF11-206ENST00000533018 FAM24BQ8N5W8 94 aa13.06□□□□□ -0.32
PCF11-206ENST00000533018 OR4X1Q8NH49 305 aa13.06□□□□□ -0.32
PCF11-206ENST00000533018 FNDC4Q9H6D8 234 aaPredicted RBP13.06□□□□□ -0.32
PCF11-206ENST00000533018 HEYLQ9NQ87 328 aaPredicted RBP13.06□□□□□ -0.32
PCF11-206ENST00000533018 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.06□□□□□ -0.32
PCF11-206ENST00000533018 DISC1C4P0D8 188 aa13.05□□□□□ -0.32
PCF11-206ENST00000533018 IFNA4P05014 189 aa13.05□□□□□ -0.32
PCF11-206ENST00000533018 HTR2BP41595 481 aa13.05□□□□□ -0.32
PCF11-206ENST00000533018 RPL5P46777 297 aaKnown RBP13.05□□□□□ -0.32
PCF11-206ENST00000533018 SPCS3P61009 180 aa13.05□□□□□ -0.32
PCF11-206ENST00000533018 MEF2DQ14814 521 aa13.05□□□□□ -0.32
PCF11-206ENST00000533018 RBMS2Q15434 407 aaKnown RBP13.05□□□□□ -0.32
PCF11-206ENST00000533018 TIGITQ495A1 244 aa13.05□□□□□ -0.32
PCF11-206ENST00000533018 PVRIGQ6DKI7 326 aa13.05□□□□□ -0.32
PCF11-206ENST00000533018 Q6ZRM9 215 aa13.05□□□□□ -0.32
PCF11-206ENST00000533018 FAM219AQ8IW50 185 aa13.05□□□□□ -0.32
PCF11-206ENST00000533018 MFFQ9GZY8 342 aa13.05□□□□□ -0.32
PCF11-206ENST00000533018 TMEM222Q9H0R3 208 aa13.05□□□□□ -0.32
PCF11-206ENST00000533018 TRAV30A0A087WSZ9 112 aa13.04□□□□□ -0.32
PCF11-206ENST00000533018 TRAV2A0A0B4J234 112 aa13.04□□□□□ -0.32
PCF11-206ENST00000533018 RPS10-NUDT3A0A1W2PQS6 291 aa13.04□□□□□ -0.32
PCF11-206ENST00000533018 CDS2O95674 445 aa13.04□□□□□ -0.32
PCF11-206ENST00000533018 SMIM18P0DKX4 95 aa13.04□□□□□ -0.32
PCF11-206ENST00000533018 P2RY1P47900 373 aa13.04□□□□□ -0.32
PCF11-206ENST00000533018 GPR141Q7Z602 305 aa13.04□□□□□ -0.32
PCF11-206ENST00000533018 GRAMD2BQ96HH9 432 aa13.04□□□□□ -0.32
PCF11-206ENST00000533018 MIXL1Q9H2W2 232 aa13.04□□□□□ -0.32
PCF11-206ENST00000533018 NAA60Q9H7X0 242 aa13.04□□□□□ -0.32
PCF11-206ENST00000533018 CEBPZOSA8MTT3 80 aa13.03□□□□□ -0.32
PCF11-206ENST00000533018 CTDSP2O14595 271 aa13.03□□□□□ -0.32
PCF11-206ENST00000533018 MRPS10P82664 201 aaKnown RBP13.03□□□□□ -0.32
PCF11-206ENST00000533018 DHODHQ02127 395 aa13.03□□□□□ -0.32
PCF11-206ENST00000533018 SSBP1Q04837 148 aaKnown RBP13.03□□□□□ -0.32
PCF11-206ENST00000533018 TMEM268Q5VZI3 342 aa13.03□□□□□ -0.32
PCF11-206ENST00000533018 SELENOHQ8IZQ5 122 aaKnown RBP13.03□□□□□ -0.32
PCF11-206ENST00000533018 LHFPL5Q8TAF8 219 aa13.03□□□□□ -0.32
PCF11-206ENST00000533018 GLYATL2Q8WU03 294 aa13.03□□□□□ -0.32
PCF11-206ENST00000533018 RBPMSQ93062 196 aaKnown RBP13.03□□□□□ -0.32
PCF11-206ENST00000533018 RTBDNQ9BSG5 229 aaPredicted RBP13.03□□□□□ -0.32
PCF11-206ENST00000533018 C11orf68Q9H3H3 251 aaKnown RBP13.03□□□□□ -0.32
PCF11-206ENST00000533018 CACNG5Q9UF02 275 aa13.03□□□□□ -0.32
PCF11-206ENST00000533018 NXPH3O95157 252 aa13.02□□□□□ -0.33
PCF11-206ENST00000533018 ZNF688P0C7X2 276 aa13.02□□□□□ -0.33
PCF11-206ENST00000533018 CRYBB3P26998 211 aa13.02□□□□□ -0.33
PCF11-206ENST00000533018 IL18Q14116 193 aa13.02□□□□□ -0.33
PCF11-206ENST00000533018 BSXQ3C1V8 233 aa13.02□□□□□ -0.33
PCF11-206ENST00000533018 RPP25LQ8N5L8 163 aaKnown RBP13.02□□□□□ -0.33
PCF11-206ENST00000533018 OR52E5Q8NH55 327 aa13.02□□□□□ -0.33
PCF11-206ENST00000533018 Q8WTZ3 238 aa13.02□□□□□ -0.33
PCF11-206ENST00000533018 GPR146Q96CH1 333 aa13.02□□□□□ -0.33
PCF11-206ENST00000533018 K7EQG2 157 aa13.01□□□□□ -0.33
PCF11-206ENST00000533018 IGKV1-17P01599 117 aa13.01□□□□□ -0.33
PCF11-206ENST00000533018 AKAIN1P0CW23 69 aa13.01□□□□□ -0.33
PCF11-206ENST00000533018 EIF2B2P49770 351 aaKnown RBP13.01□□□□□ -0.33
PCF11-206ENST00000533018 RND2P52198 227 aa13.01□□□□□ -0.33
PCF11-206ENST00000533018 SURF2Q15527 256 aaPredicted RBP13.01□□□□□ -0.33
PCF11-206ENST00000533018 SLC24A4Q8NFF2 622 aa13.01□□□□□ -0.33
PCF11-206ENST00000533018 DIRAS2Q96HU8 199 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms