RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 HEBP1Q9NRV9 189 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 RPRMQ9NS64 109 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 SPANXCQ9NY87 97 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 YTHDF2Q9Y5A9 579 aaKnown RBP2.51□□□□□ -2.01
CD44-217ENST00000525348 INSIG2Q9Y5U4 225 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 DOCK6Q96HP0 2047 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 ZFC3H1O60293 1989 aaKnown RBP2.5□□□□□ -2.01
CD44-217ENST00000525348 MYLKQ15746 1914 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 NUP210Q8TEM1 1887 aaPredicted RBP2.5□□□□□ -2.01
CD44-217ENST00000525348 PLXNA4Q9HCM2 1894 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 LAMA4Q16363 1823 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 TSPAN11A1L157 253 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 ZNF850A8MQ14 1090 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 FNDC10F2Z333 226 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 ZNF593O00488 134 aaPredicted RBP2.5□□□□□ -2.01
CD44-217ENST00000525348 NPFFO15130 113 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 RAMP1O60894 148 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 REM1O75628 298 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 STK17BO94768 372 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 APOA2P02652 100 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 TTRP02766 147 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 CD99P14209 185 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 RND2P52198 227 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 RPS14P62263 151 aaKnown RBP2.5□□□□□ -2.01
CD44-217ENST00000525348 LCN6P62502 163 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 ATP5G2Q06055 141 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 CCL15Q16663 113 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 DMRTC1Q5HYR2 192 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 ZNF684Q5T5D7 378 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 Q6AWC8 147 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 Q6Q795 121 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 SBSNQ6UWP8 590 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 CXCL17Q6UXB2 119 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 Q6ZN92 141 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 TIFABQ6ZNK6 161 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 Q6ZUT4 128 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 GOLT1AQ6ZVE7 132 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 MOB3BQ86TA1 216 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 LRP11Q86VZ4 500 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 MKXQ8IYA7 352 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 C1orf174Q8IYL3 243 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 LINC01561Q8N1V8 128 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 ZDHHC22Q8N966 263 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 ZIC4Q8N9L1 334 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 OR51T1Q8NGJ9 327 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 MFSD8Q8NHS3 518 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 JOSD2Q8TAC2 188 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 TMEM54Q969K7 222 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 PLEKHB2Q96CS7 222 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 GGTLC1Q9BX51 225 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 MRPL32Q9BYC8 188 aaKnown RBP2.5□□□□□ -2.01
CD44-217ENST00000525348 FBXL15Q9H469 300 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 C1orf123Q9NWV4 160 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 TXNL4BQ9NX01 149 aaKnown RBP2.5□□□□□ -2.01
CD44-217ENST00000525348 TAS2R5Q9NYW4 299 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 TVP23BQ9NYZ1 205 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 TPRKBQ9Y3C4 175 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 LAMB2P55268 1798 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 CD163L1Q9NR16 1453 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 SCN7AQ01118 1682 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 ZNF831Q5JPB2 1677 aa2.5□□□□□ -2.01
CD44-217ENST00000525348 UBR2Q8IWV8 1755 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 TRBV24-1A0A075B6N3 115 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 TRGV10A0A0A0MS01 117 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 TMED7-TICAM2A0A0A6YYA0 188 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 TRAV14DV4A0A0A6YYC5 116 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 ZNF860A6NHJ4 632 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 J3QR89 54 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 RER1O15258 196 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 TRAF3IP2O43734 574 aaPredicted RBP2.49□□□□□ -2.01
CD44-217ENST00000525348 CXCL13O43927 109 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 ATP5LO75964 103 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 IGHMP01871 453 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 GPX1P07203 203 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 SLC25A6P12236 298 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 HIST1H1DP16402 221 aaKnown RBP2.49□□□□□ -2.01
CD44-217ENST00000525348 GABRG2P18507 467 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 RBMXP38159 391 aaKnown RBP2.49□□□□□ -2.01
CD44-217ENST00000525348 RPL13AP40429 203 aaKnown RBP2.49□□□□□ -2.01
CD44-217ENST00000525348 NMUP48645 174 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 NUDT2P50583 147 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 TPPP2P59282 170 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 TGFBR3Q03167 851 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 Q0VG73 95 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 ZNF345Q14585 488 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 IHHQ14623 411 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 PMVKQ15126 192 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 BVES-AS1Q5T3Y7 98 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 TSPO2Q5TGU0 170 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 LCN8Q6JVE9 175 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 ANKRD37Q7Z713 158 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 ATOH7Q8N100 152 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 ZNF615Q8N8J6 731 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 Q8N9L7 120 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 OR11H6Q8NGC7 330 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 OR52R1Q8NGF1 315 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 OR10D3Q8NH80 312 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 OR1L1Q8NH94 360 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 OR51E1Q8TCB6 317 aa2.49□□□□□ -2.01
CD44-217ENST00000525348 C15orf40Q8WUR7 153 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms