RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 CD74P04233 296 aa10.54□□□□□ -0.72
CSTF3-204ENST00000524556 IGKV1D-39P04432 117 aa10.54□□□□□ -0.72
CSTF3-204ENST00000524556 PHLDA2Q53GA4 152 aa10.54□□□□□ -0.72
CSTF3-204ENST00000524556 OR5H2Q8NGV7 314 aa10.54□□□□□ -0.72
CSTF3-204ENST00000524556 OR6F1Q8NGZ6 308 aa10.54□□□□□ -0.72
CSTF3-204ENST00000524556 RAB40CQ96S21 281 aa10.54□□□□□ -0.72
CSTF3-204ENST00000524556 IGLV2-18A0A075B6J9 118 aa10.53□□□□□ -0.72
CSTF3-204ENST00000524556 NAT1P18440 290 aa10.53□□□□□ -0.72
CSTF3-204ENST00000524556 PPP5CP53041 499 aa10.53□□□□□ -0.72
CSTF3-204ENST00000524556 TAS2R46P59540 309 aa10.53□□□□□ -0.72
CSTF3-204ENST00000524556 GABARAPL2P60520 117 aa10.53□□□□□ -0.72
CSTF3-204ENST00000524556 KCTD21Q4G0X4 260 aa10.53□□□□□ -0.72
CSTF3-204ENST00000524556 SOHLH1Q5JUK2 328 aa10.53□□□□□ -0.72
CSTF3-204ENST00000524556 RNF167Q9H6Y7 350 aa10.53□□□□□ -0.72
CSTF3-204ENST00000524556 PLA2G2EQ9NZK7 142 aa10.53□□□□□ -0.72
CSTF3-204ENST00000524556 SNCAP37840 140 aa10.52□□□□□ -0.73
CSTF3-204ENST00000524556 DHRS2Q13268 280 aa10.52□□□□□ -0.73
CSTF3-204ENST00000524556 SPINK9Q5DT21 86 aa10.52□□□□□ -0.73
CSTF3-204ENST00000524556 PSMG4Q5JS54 123 aa10.52□□□□□ -0.73
CSTF3-204ENST00000524556 LPCAT3Q6P1A2 487 aa10.52□□□□□ -0.73
CSTF3-204ENST00000524556 Q6ZRM9 215 aa10.52□□□□□ -0.73
CSTF3-204ENST00000524556 TBC1D26Q86UD7 250 aa10.52□□□□□ -0.73
CSTF3-204ENST00000524556 UBE2DNLQ8IWF7 75 aa10.52□□□□□ -0.73
CSTF3-204ENST00000524556 SPARTQ8N0X7 666 aa10.52□□□□□ -0.73
CSTF3-204ENST00000524556 TMEM230Q96A57 120 aa10.52□□□□□ -0.73
CSTF3-204ENST00000524556 MRGPRFQ96AM1 343 aa10.52□□□□□ -0.73
CSTF3-204ENST00000524556 NARS2Q96I59 477 aaKnown RBP10.52□□□□□ -0.73
CSTF3-204ENST00000524556 C1QTNF4Q9BXJ3 329 aa10.52□□□□□ -0.73
CSTF3-204ENST00000524556 MRPL36Q9P0J6 103 aaKnown RBP10.52□□□□□ -0.73
CSTF3-204ENST00000524556 XCL2Q9UBD3 114 aa10.52□□□□□ -0.73
CSTF3-204ENST00000524556 NACAE9PAV3 2078 aa10.52□□□□□ -0.73
CSTF3-204ENST00000524556 APOBP04114 4563 aaKnown RBP10.51□□□□□ -0.73
CSTF3-204ENST00000524556 HELTA6NFD8 242 aa10.51□□□□□ -0.73
CSTF3-204ENST00000524556 INS-IGF2F8WCM5 200 aa10.51□□□□□ -0.73
CSTF3-204ENST00000524556 CORTO00230 105 aa10.51□□□□□ -0.73
CSTF3-204ENST00000524556 CLN5O75503 358 aa10.51□□□□□ -0.73
CSTF3-204ENST00000524556 S100GP29377 79 aa10.51□□□□□ -0.73
CSTF3-204ENST00000524556 NUTF2P61970 127 aaKnown RBP10.51□□□□□ -0.73
CSTF3-204ENST00000524556 LYSMD2Q8IV50 215 aa10.51□□□□□ -0.73
CSTF3-204ENST00000524556 FCGR1BQ92637 280 aa10.51□□□□□ -0.73
CSTF3-204ENST00000524556 S100A16Q96FQ6 103 aaKnown RBP10.51□□□□□ -0.73
CSTF3-204ENST00000524556 FAM210BQ96KR6 192 aa10.51□□□□□ -0.73
CSTF3-204ENST00000524556 U3KQE9 123 aa10.51□□□□□ -0.73
CSTF3-204ENST00000524556 ANKRD65E5RJM6 399 aa10.5□□□□□ -0.73
CSTF3-204ENST00000524556 SPART-AS1P0CW21 52 aa10.5□□□□□ -0.73
CSTF3-204ENST00000524556 HRH1P35367 487 aa10.5□□□□□ -0.73
CSTF3-204ENST00000524556 HSPA13P48723 471 aa10.5□□□□□ -0.73
CSTF3-204ENST00000524556 EIF2B2P49770 351 aaKnown RBP10.5□□□□□ -0.73
CSTF3-204ENST00000524556 SUB1P53999 127 aaKnown RBP eCLIP10.5□□□□□ -0.73
CSTF3-204ENST00000524556 MLANAQ16655 118 aa10.5□□□□□ -0.73
CSTF3-204ENST00000524556 IZUMO4Q1ZYL8 232 aa10.5□□□□□ -0.73
CSTF3-204ENST00000524556 C1orf134Q5TEV5 83 aa10.5□□□□□ -0.73
CSTF3-204ENST00000524556 SLC35G3Q8N808 338 aa10.5□□□□□ -0.73
CSTF3-204ENST00000524556 OR4X1Q8NH49 305 aa10.5□□□□□ -0.73
CSTF3-204ENST00000524556 NEU1Q99519 415 aa10.5□□□□□ -0.73
CSTF3-204ENST00000524556 FNDC4Q9H6D8 234 aaPredicted RBP10.5□□□□□ -0.73
CSTF3-204ENST00000524556 LOC100506127A0A0U1RQW1 187 aa10.49□□□□□ -0.73
CSTF3-204ENST00000524556 H3BMM0 161 aa10.49□□□□□ -0.73
CSTF3-204ENST00000524556 TMEM127O75204 238 aa10.49□□□□□ -0.73
CSTF3-204ENST00000524556 IGKV1-17P01599 117 aa10.49□□□□□ -0.73
CSTF3-204ENST00000524556 RNASE2P10153 161 aaKnown RBP10.49□□□□□ -0.73
CSTF3-204ENST00000524556 AP2S1P53680 142 aaPredicted RBP10.49□□□□□ -0.73
CSTF3-204ENST00000524556 TAS2R20P59543 309 aa10.49□□□□□ -0.73
CSTF3-204ENST00000524556 RNF212Q495C1 297 aa10.49□□□□□ -0.73
CSTF3-204ENST00000524556 C16orf54Q6UWD8 224 aa10.49□□□□□ -0.73
CSTF3-204ENST00000524556 IZUMO2Q6UXV1 221 aa10.49□□□□□ -0.73
CSTF3-204ENST00000524556 ZNF705AQ6ZN79 300 aaPredicted RBP10.49□□□□□ -0.73
CSTF3-204ENST00000524556 VCX3BQ9H321 246 aa10.49□□□□□ -0.73
CSTF3-204ENST00000524556 HERC1Q15751 4861 aa10.48□□□□□ -0.73
CSTF3-204ENST00000524556 A0A0B4J293 547 aa10.48□□□□□ -0.73
CSTF3-204ENST00000524556 TMEM189A5PLL7 270 aa10.48□□□□□ -0.73
CSTF3-204ENST00000524556 SCGB2A1O75556 95 aa10.48□□□□□ -0.73
CSTF3-204ENST00000524556 HLA-DMAP28067 261 aa10.48□□□□□ -0.73
CSTF3-204ENST00000524556 RPL5P46777 297 aaKnown RBP10.48□□□□□ -0.73
CSTF3-204ENST00000524556 EMP1P54849 157 aa10.48□□□□□ -0.73
CSTF3-204ENST00000524556 TSPAN5P62079 268 aa10.48□□□□□ -0.73
CSTF3-204ENST00000524556 SNRPD3P62318 126 aaKnown RBP10.48□□□□□ -0.73
CSTF3-204ENST00000524556 TIGITQ495A1 244 aa10.48□□□□□ -0.73
CSTF3-204ENST00000524556 TMEM69Q5SWH9 247 aa10.48□□□□□ -0.73
CSTF3-204ENST00000524556 GLMPQ8WWB7 406 aa10.48□□□□□ -0.73
CSTF3-204ENST00000524556 SEPSECSQ9HD40 501 aaKnown RBP10.48□□□□□ -0.73
CSTF3-204ENST00000524556 TRAV30A0A087WSZ9 112 aa10.47□□□□□ -0.73
CSTF3-204ENST00000524556 SMIM9A6NGZ8 99 aa10.47□□□□□ -0.73
CSTF3-204ENST00000524556 ZNF705FA8MVS1 300 aaPredicted RBP10.47□□□□□ -0.73
CSTF3-204ENST00000524556 FAM90A26D6RGX4 464 aa10.47□□□□□ -0.73
CSTF3-204ENST00000524556 CDK2AP2O75956 126 aa10.47□□□□□ -0.73
CSTF3-204ENST00000524556 IGKV1-5P01602 117 aa10.47□□□□□ -0.73
CSTF3-204ENST00000524556 P0C879 139 aa10.47□□□□□ -0.73
CSTF3-204ENST00000524556 ZNF705DP0CH99 300 aaPredicted RBP10.47□□□□□ -0.73
CSTF3-204ENST00000524556 ZNF705BP0CI00 300 aaPredicted RBP10.47□□□□□ -0.73
CSTF3-204ENST00000524556 PRSS3P35030 304 aa10.47□□□□□ -0.73
CSTF3-204ENST00000524556 OPRK1P41145 380 aa10.47□□□□□ -0.73
CSTF3-204ENST00000524556 UCP3P55916 312 aa10.47□□□□□ -0.73
CSTF3-204ENST00000524556 UBE2NLQ5JXB2 153 aa10.47□□□□□ -0.73
CSTF3-204ENST00000524556 DNAH5Q8TE73 4624 aa10.46□□□□□ -0.73
CSTF3-204ENST00000524556 C16orf90A8MZG2 172 aa10.46□□□□□ -0.73
CSTF3-204ENST00000524556 HNRNPCP07910 306 aaKnown RBP eCLIP10.46□□□□□ -0.73
CSTF3-204ENST00000524556 ETV6P41212 452 aa10.46□□□□□ -0.73
CSTF3-204ENST00000524556 DKK2Q9UBU2 259 aa10.46□□□□□ -0.73
CSTF3-204ENST00000524556 RAB26Q9ULW5 256 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms