RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 GABRA3P34903 492 aa2.54□□□□□ -2
SKP1-208ENST00000521216 MPV17P39210 176 aa2.54□□□□□ -2
SKP1-208ENST00000521216 GPR1P46091 355 aa2.54□□□□□ -2
SKP1-208ENST00000521216 ZNF140P52738 457 aaPredicted RBP2.54□□□□□ -2
SKP1-208ENST00000521216 RHOAP61586 193 aa2.54□□□□□ -2
SKP1-208ENST00000521216 LSM3P62310 102 aaKnown RBP2.54□□□□□ -2
SKP1-208ENST00000521216 HIST1H1AQ02539 215 aaPredicted RBP2.54□□□□□ -2
SKP1-208ENST00000521216 ST3GAL4Q11206 333 aa2.54□□□□□ -2
SKP1-208ENST00000521216 MAD2L1BPQ15013 274 aaPredicted RBP2.54□□□□□ -2
SKP1-208ENST00000521216 ATP6AP1LQ52LC2 224 aa2.54□□□□□ -2
SKP1-208ENST00000521216 SPANXN3Q5MJ09 141 aa2.54□□□□□ -2
SKP1-208ENST00000521216 MRPL54Q6P161 138 aaKnown RBP2.54□□□□□ -2
SKP1-208ENST00000521216 EPGNQ6UW88 154 aa2.54□□□□□ -2
SKP1-208ENST00000521216 FOXI2Q6ZQN5 318 aa2.54□□□□□ -2
SKP1-208ENST00000521216 SGPP2Q8IWX5 399 aa2.54□□□□□ -2
SKP1-208ENST00000521216 KCNRGQ8N5I3 272 aa2.54□□□□□ -2
SKP1-208ENST00000521216 C5orf17Q8NAS9 161 aa2.54□□□□□ -2
SKP1-208ENST00000521216 OR5D16Q8NGK9 328 aa2.54□□□□□ -2
SKP1-208ENST00000521216 PSMF1Q92530 271 aa2.54□□□□□ -2
SKP1-208ENST00000521216 EFCAB11Q9BUY7 163 aa2.54□□□□□ -2
SKP1-208ENST00000521216 TAPBPLQ9BX59 468 aa2.54□□□□□ -2
SKP1-208ENST00000521216 ZNF471Q9BX82 626 aaPredicted RBP2.54□□□□□ -2
SKP1-208ENST00000521216 PECRQ9BY49 303 aa2.54□□□□□ -2
SKP1-208ENST00000521216 MAP1LC3BQ9GZQ8 125 aa2.54□□□□□ -2
SKP1-208ENST00000521216 CHRNA10Q9GZZ6 450 aa2.54□□□□□ -2
SKP1-208ENST00000521216 TMEM242Q9NWH2 141 aa2.54□□□□□ -2
SKP1-208ENST00000521216 FKBP11Q9NYL4 201 aa2.54□□□□□ -2
SKP1-208ENST00000521216 DNAJC27Q9NZQ0 273 aa2.54□□□□□ -2
SKP1-208ENST00000521216 TNFSF18Q9UNG2 199 aa2.54□□□□□ -2
SKP1-208ENST00000521216 CYSLTR1Q9Y271 337 aa2.54□□□□□ -2
SKP1-208ENST00000521216 BTRCQ9Y297 605 aa2.54□□□□□ -2
SKP1-208ENST00000521216 DIP2BQ9P265 1576 aa2.53□□□□□ -2
SKP1-208ENST00000521216 A0A0A6YYD5 115 aa2.53□□□□□ -2
SKP1-208ENST00000521216 LOC100130705A0A1B0GUX0 176 aa2.53□□□□□ -2
SKP1-208ENST00000521216 MEIS3P1A6NDR6 274 aa2.53□□□□□ -2
SKP1-208ENST00000521216 GGT3PA6NGU5 568 aa2.53□□□□□ -2
SKP1-208ENST00000521216 FABP5P3A8MUU1 101 aa2.53□□□□□ -2
SKP1-208ENST00000521216 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.53□□□□□ -2
SKP1-208ENST00000521216 H7BYZ3 331 aa2.53□□□□□ -2
SKP1-208ENST00000521216 HMGB3O15347 200 aaKnown RBP2.53□□□□□ -2
SKP1-208ENST00000521216 MPDU1O75352 247 aa2.53□□□□□ -2
SKP1-208ENST00000521216 TRAPPC6AO75865 159 aa2.53□□□□□ -2
SKP1-208ENST00000521216 OR7C1O76099 320 aaPredicted RBP2.53□□□□□ -2
SKP1-208ENST00000521216 TRBV12-3P01733 135 aa2.53□□□□□ -2
SKP1-208ENST00000521216 HLA-DQB2P05538 268 aa2.53□□□□□ -2
SKP1-208ENST00000521216 KLK1P06870 262 aa2.53□□□□□ -2
SKP1-208ENST00000521216 CRYGDP07320 174 aa2.53□□□□□ -2
SKP1-208ENST00000521216 CTSDP07339 412 aaPredicted RBP2.53□□□□□ -2
SKP1-208ENST00000521216 SFTA3P0C7M3 94 aa2.53□□□□□ -2
SKP1-208ENST00000521216 SLC35G6P0C7Q6 338 aa2.53□□□□□ -2
SKP1-208ENST00000521216 IGLC1P0CG04 106 aa2.53□□□□□ -2
SKP1-208ENST00000521216 SLC25A4P12235 298 aa2.53□□□□□ -2
SKP1-208ENST00000521216 CTSEP14091 401 aa2.53□□□□□ -2
SKP1-208ENST00000521216 ATF1P18846 271 aa2.53□□□□□ -2
SKP1-208ENST00000521216 RPS12P25398 132 aaKnown RBP2.53□□□□□ -2
SKP1-208ENST00000521216 CD34P28906 385 aa2.53□□□□□ -2
SKP1-208ENST00000521216 STC1P52823 247 aa2.53□□□□□ -2
SKP1-208ENST00000521216 TCL1AP56279 114 aa2.53□□□□□ -2
SKP1-208ENST00000521216 RPS25P62851 125 aaKnown RBP2.53□□□□□ -2
SKP1-208ENST00000521216 MEF2BQ02080 365 aaPredicted RBP2.53□□□□□ -2
SKP1-208ENST00000521216 SMAGPQ0VAQ4 97 aa2.53□□□□□ -2
SKP1-208ENST00000521216 TMEM267Q0VDI3 215 aaPredicted RBP2.53□□□□□ -2
SKP1-208ENST00000521216 PDGFRLQ15198 375 aa2.53□□□□□ -2
SKP1-208ENST00000521216 CCSMST1Q4G0I0 132 aa2.53□□□□□ -2
SKP1-208ENST00000521216 C6orf99Q4VX62 202 aa2.53□□□□□ -2
SKP1-208ENST00000521216 BCL2L15Q5TBC7 163 aa2.53□□□□□ -2
SKP1-208ENST00000521216 GLT8D1Q68CQ7 371 aa2.53□□□□□ -2
SKP1-208ENST00000521216 OR2T2Q6IF00 324 aa2.53□□□□□ -2
SKP1-208ENST00000521216 LRP11Q86VZ4 500 aa2.53□□□□□ -2
SKP1-208ENST00000521216 GKN2Q86XP6 184 aa2.53□□□□□ -2
SKP1-208ENST00000521216 FAM24BQ8N5W8 94 aa2.53□□□□□ -2
SKP1-208ENST00000521216 KRTCAP2Q8N6L1 136 aa2.53□□□□□ -2
SKP1-208ENST00000521216 GPR32P1Q8NGA4 272 aa2.53□□□□□ -2
SKP1-208ENST00000521216 OR4X1Q8NH49 305 aa2.53□□□□□ -2
SKP1-208ENST00000521216 PP6455Q8WZ26 134 aa2.53□□□□□ -2
SKP1-208ENST00000521216 TSLPQ969D9 159 aa2.53□□□□□ -2
SKP1-208ENST00000521216 SLAMF6Q96DU3 332 aa2.53□□□□□ -2
SKP1-208ENST00000521216 DIRAS2Q96HU8 199 aa2.53□□□□□ -2
SKP1-208ENST00000521216 DERL1Q9BUN8 251 aa2.53□□□□□ -2
SKP1-208ENST00000521216 EMC6Q9BV81 110 aa2.53□□□□□ -2
SKP1-208ENST00000521216 EBPLQ9BY08 206 aa2.53□□□□□ -2
SKP1-208ENST00000521216 LPAR5Q9H1C0 372 aa2.53□□□□□ -2
SKP1-208ENST00000521216 TMEM133Q9H2Q1 129 aa2.53□□□□□ -2
SKP1-208ENST00000521216 ENY2Q9NPA8 101 aa2.53□□□□□ -2
SKP1-208ENST00000521216 RBM22Q9NW64 420 aaKnown RBP eCLIP2.53□□□□□ -28e-8■■■■□ 22.7
SKP1-208ENST00000521216 PRO0628Q9UI54 55 aa2.53□□□□□ -2
SKP1-208ENST00000521216 HDGFL3Q9Y3E1 203 aa2.53□□□□□ -2
SKP1-208ENST00000521216 ENPP4Q9Y6X5 453 aa2.53□□□□□ -2
SKP1-208ENST00000521216 PHLPP1O60346 1717 aa2.53□□□□□ -2
SKP1-208ENST00000521216 TOPAZ1Q8N9V7 1692 aa2.53□□□□□ -2
SKP1-208ENST00000521216 MED1Q15648 1581 aaPredicted RBP2.53□□□□□ -2.01
SKP1-208ENST00000521216 DIP2CQ9Y2E4 1556 aa2.53□□□□□ -2.01
SKP1-208ENST00000521216 SLIT1O75093 1534 aa2.52□□□□□ -2.01
SKP1-208ENST00000521216 NUP153P49790 1475 aaKnown RBP2.52□□□□□ -2.01
SKP1-208ENST00000521216 PLXND1Q9Y4D7 1925 aa2.52□□□□□ -2.01
SKP1-208ENST00000521216 DDX60Q8IY21 1712 aaKnown RBP2.52□□□□□ -2.01
SKP1-208ENST00000521216 TRBV24-1A0A075B6N3 115 aa2.52□□□□□ -2.01
SKP1-208ENST00000521216 TRAV36DV7A0A075B6V5 113 aa2.52□□□□□ -2.01
SKP1-208ENST00000521216 A0A0D9SFI3 127 aa2.52□□□□□ -2.01
SKP1-208ENST00000521216 A0A1B0GW64 132 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms