RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 TMEM244Q5VVB8 128 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 Q6ZTC4 211 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 DEFB128Q7Z7B8 93 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 C10orf126Q8N4M7 172 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 CNEP1R1Q8N9A8 125 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 Q8N9P0 234 aaPredicted RBP2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 OR8D4Q8NGM9 314 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 WFDC5Q8TCV5 224 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 TMEM106AQ96A25 262 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 UBE2WQ96B02 151 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 UPK3BQ9BT76 320 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 TCEAL2Q9H3H9 227 aaPredicted RBP2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 CBLN4Q9NTU7 201 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 MRPL16Q9NX20 251 aaKnown RBP2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 ZNF835Q9Y2P0 537 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 RNF11Q9Y3C5 154 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 HEY1Q9Y5J3 304 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 RPRD2Q5VT52 1461 aaKnown RBP2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 TCF20Q9UGU0 1960 aaKnown RBP2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 SYNJ1O43426 1573 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 PTPRTO14522 1441 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 PRG4Q92954 1404 aaPredicted RBP2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 A0A0D9SEW6 157 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 PINLYPA6NC86 204 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 TMEM212A6NML5 194 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 LY6LH3BQJ8 138 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 K7ERJ3 54 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 TP53I11O14683 189 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 METTL15P1P0C7V9 234 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 IGHV3-30-3P0DP02 117 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 AZU1P20160 251 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 ARPP19P56211 112 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 MRPS10P82664 201 aaKnown RBP2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 RPL18Q07020 188 aaKnown RBP2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 OCIAD2Q56VL3 154 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 SCIMPQ6UWF3 145 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 ZNF705AQ6ZN79 300 aaPredicted RBP2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 C3orf62Q6ZUJ4 267 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 LINC00305Q7Z4B0 112 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 CTAGE3PQ8IX95 158 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 CYB561D1Q8N8Q1 229 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 OR4E2Q8NGC2 313 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 ADAT1Q9BUB4 502 aaKnown RBP2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 TMEM133Q9H2Q1 129 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 OR5V1Q9UGF6 321 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 HS3ST2Q9Y278 367 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 U3KQK5 164 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 ZNF646O15015 1829 aaPredicted RBP2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 TOPBP1Q92547 1522 aa2.62□□□□□ -1.99
RNU4-60P-201ENST00000517239 MED1Q15648 1581 aaPredicted RBP2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 FANCMQ8IYD8 2048 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 SCN4AP35499 1836 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 NUP98P52948 1817 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 DISP2A7MBM2 1401 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 CUL7Q14999 1698 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 CEP164Q9UPV0 1460 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 IGKV1OR2-108A0A075B7D4 117 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 IGKV3D-15A0A087WSY6 115 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 MEIS3P1A6NDR6 274 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 CYSRT1A8MQ03 144 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 LY6HO94772 140 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 IGHV1-69P01742 117 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 S100A8P05109 93 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 ZNF883P0CG24 379 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 ZNF286BP0CG31 522 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 LINC00694P0DN24 101 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 NOVP48745 357 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 DYNLT3P51808 116 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 HES1Q14469 280 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 HAGHLQ6PII5 290 aaPredicted RBP2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 ZNF322Q6U7Q0 402 aaPredicted RBP2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 TMEM14EPQ6UXP3 125 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 ZFP2Q6ZN57 461 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 C16orf47Q6ZP98 133 aaPredicted RBP2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 SDIM1Q6ZPB5 146 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 PDZD9Q8IXQ8 264 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 SAXO1Q8IYX7 474 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 HIST3H2BBQ8N257 126 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 TERB2Q8NHR7 220 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 RNF5Q99942 180 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 MRPL32Q9BYC8 188 aaKnown RBP2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 BANF2Q9H503 90 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 XAGE1AQ9HD64 81 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 OSTCQ9NRP0 149 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 DSPPQ9NZW4 1301 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 AGRNO00468 2067 aa2.61□□□□□ -1.99
RNU4-60P-201ENST00000517239 MYOM3Q5VTT5 1437 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 EML6Q6ZMW3 1958 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 AKAP12Q02952 1782 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 IGLV3-10A0A075B6K4 115 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 IGHV1-58A0A0C4DH39 117 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 TRBV7-6A0A0J9YX20 115 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 C20orf202A1L168 122 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 C19orf71A6NCJ1 209 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 SLC22A1O15245 554 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 LHBP01229 141 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 IGKV3-20P01619 116 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 IGHV3-7P01780 117 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 C1QAP02745 245 aa2.6□□□□□ -1.99
RNU4-60P-201ENST00000517239 GPX1P07203 203 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms