RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 RBMS3Q6XE24 437 aaKnown RBP4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SLC35E3Q7Z769 313 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TTC9CQ8N5M4 171 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PIFOQ8TCI5 191 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SSMEM1Q8WWF3 244 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 NPIPB3Q92617 1050 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 MBD6Q96DN6 1003 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SLC35E1Q96K37 410 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SLC25A33Q9BSK2 321 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 C19orf24Q9BVV8 132 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SLC25A22Q9H936 323 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 C1RLQ9NZP8 487 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 MRPL36Q9P0J6 103 aaKnown RBP4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 KLK9Q9UKQ9 250 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ITPR2Q14571 2701 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FASNP49327 2511 aaKnown RBP4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 IGHV7-81A0A0B4J1V7 117 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 A0A1W2PPV4 95 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TCRBV4S1A1TA0A5B7 111 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 NCBP2LA6PVI3 153 aaKnown RBP4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 NPIPB5A8MRT5 1133 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 I3L2K1 104 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 HMGB3O15347 200 aaKnown RBP4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 EIF3GO75821 320 aaKnown RBP eCLIP4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TSPAN9O75954 239 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SNAPINO95295 136 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 AVPP01185 164 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 HLA-DRB1P01911 266 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 OR5G3P0C626 314 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 APELAP0DMC3 54 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 IGHV4-38-2P0DP08 117 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 DEFA4P12838 97 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 OR10J1P30954 320 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PSMB3P49720 205 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PPT1P50897 306 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SELENOTP62341 195 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 RHOBP62745 196 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 NDPQ00604 133 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SOHLH1Q5JUK2 328 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ASPHD1Q5U4P2 390 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PRSS57Q6UWY2 283 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 C19orf35Q6ZS72 473 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CYP2G1PQ6ZSU1 146 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 LINC01356Q8N9X3 169 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CLRN3Q8NCR9 226 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 OR1L6Q8NGR2 347 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 OR4X1Q8NH49 305 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 RXFP4Q8TDU9 374 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ABHD5Q8WTS1 349 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ACY3Q96HD9 319 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FANCD2OSQ96PS1 177 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TRGV9Q99603 122 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 NKX6-2Q9C056 277 aaPredicted RBP4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 WNT10AQ9GZT5 417 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TMPRSS5Q9H3S3 457 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 C7orf69Q9H7B7 122 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SEPSECSQ9HD40 501 aaKnown RBP4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 DNAJC4Q9NNZ3 241 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 MANBALQ9NQG1 85 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 HIF1ANQ9NWT6 349 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 GNG13Q9P2W3 67 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 VAX2Q9UIW0 290 aa4.29□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ITPR3Q14573 2671 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TRAV40A0A0B4J280 105 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 A0A0U1RQK1 487 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ZFP92A6NM28 416 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 J3QLI3 93 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 K7EIM0 57 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 DNASE2O00115 360 aaPredicted RBP4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CXorf1O96002 111 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 MT-CO2P00403 227 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 IFNA1P01562 189 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 IGHV3-48P01763 117 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 AMY1AP04745 511 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FBP1P09467 338 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ARL14EPLP0DKL9 152 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 GATA2P23769 480 aaPredicted RBP4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 GCHFRP30047 84 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 NPBWR1P48145 328 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 RND2P52198 227 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 BPIFB3P59826 476 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CD81P60033 236 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PLP1P60201 277 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ZNF90Q03938 601 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 BTN1A1Q13410 526 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 KLF17Q5JT82 389 aaPredicted RBP4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SPATA31B1PQ5VZV4 182 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FAM90A2PQ658T7 463 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PATE2Q6UY27 113 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SPNS3Q6ZMD2 512 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 KRTAP1-3Q8IUG1 177 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 C5orf56Q8N8D9 126 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CYB561D1Q8N8Q1 229 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SGMS2Q8NHU3 365 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 NANPQ8TBE9 248 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SUN5Q8TC36 379 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 GATAD1Q8WUU5 269 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TMEM37Q8WXS4 190 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ARPC1AQ92747 370 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 MISP3Q96FF7 219 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms