RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 NACAE9PAV3 2078 aa14.45□□□□□ -0.1
SQSTM1-215ENST00000514093 HELTA6NFD8 242 aa14.45□□□□□ -0.1
SQSTM1-215ENST00000514093 EBAG9O00559 213 aa14.45□□□□□ -0.1
SQSTM1-215ENST00000514093 PMP2P02689 132 aa14.45□□□□□ -0.1
SQSTM1-215ENST00000514093 CLEC2LP0C7M8 214 aa14.45□□□□□ -0.1
SQSTM1-215ENST00000514093 HSPE1P61604 102 aaKnown RBP14.45□□□□□ -0.1
SQSTM1-215ENST00000514093 PHLDA2Q53GA4 152 aa14.45□□□□□ -0.1
SQSTM1-215ENST00000514093 H2BFWTQ7Z2G1 175 aa14.45□□□□□ -0.1
SQSTM1-215ENST00000514093 SEC22AQ96IW7 307 aa14.45□□□□□ -0.1
SQSTM1-215ENST00000514093 C1QTNF4Q9BXJ3 329 aa14.45□□□□□ -0.1
SQSTM1-215ENST00000514093 FXYD6Q9H0Q3 95 aa14.45□□□□□ -0.1
SQSTM1-215ENST00000514093 SCRT2Q9NQ03 307 aa14.45□□□□□ -0.1
SQSTM1-215ENST00000514093 IGHV3OR16-12A0A075B7B8 117 aa14.44□□□□□ -0.1
SQSTM1-215ENST00000514093 GPR31O00270 319 aa14.44□□□□□ -0.1
SQSTM1-215ENST00000514093 IGKV1-39P01597 117 aa14.44□□□□□ -0.1
SQSTM1-215ENST00000514093 IGKV1D-39P04432 117 aa14.44□□□□□ -0.1
SQSTM1-215ENST00000514093 MXD1Q05195 221 aa14.44□□□□□ -0.1
SQSTM1-215ENST00000514093 MLANAQ16655 118 aa14.44□□□□□ -0.1
SQSTM1-215ENST00000514093 TMEM230Q96A57 120 aa14.44□□□□□ -0.1
SQSTM1-215ENST00000514093 FAM210BQ96KR6 192 aa14.44□□□□□ -0.1
SQSTM1-215ENST00000514093 IFT46Q9NQC8 304 aa14.44□□□□□ -0.1
SQSTM1-215ENST00000514093 FGF9P31371 208 aaPredicted RBP14.43□□□□□ -0.1
SQSTM1-215ENST00000514093 CBX5P45973 191 aa14.43□□□□□ -0.1
SQSTM1-215ENST00000514093 NUTF2P61970 127 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-215ENST00000514093 IZUMO4Q1ZYL8 232 aa14.43□□□□□ -0.1
SQSTM1-215ENST00000514093 H3BMM0 161 aa14.42□□□□□ -0.1
SQSTM1-215ENST00000514093 SDC2P34741 201 aa14.42□□□□□ -0.1
SQSTM1-215ENST00000514093 SNCAP37840 140 aa14.42□□□□□ -0.1
SQSTM1-215ENST00000514093 FXYD7P58549 80 aa14.42□□□□□ -0.1
SQSTM1-215ENST00000514093 IDNKQ5T6J7 187 aa14.42□□□□□ -0.1
SQSTM1-215ENST00000514093 FAM222AQ5U5X8 452 aa14.42□□□□□ -0.1
SQSTM1-215ENST00000514093 ZNF705AQ6ZN79 300 aaPredicted RBP14.42□□□□□ -0.1
SQSTM1-215ENST00000514093 MRGPRFQ96AM1 343 aa14.42□□□□□ -0.1
SQSTM1-215ENST00000514093 NARS2Q96I59 477 aaKnown RBP14.42□□□□□ -0.1
SQSTM1-215ENST00000514093 DIABLOQ9NR28 239 aa14.42□□□□□ -0.1
SQSTM1-215ENST00000514093 DKK2Q9UBU2 259 aa14.42□□□□□ -0.1
SQSTM1-215ENST00000514093 CLN5O75503 358 aa14.41□□□□□ -0.1
SQSTM1-215ENST00000514093 TIGITQ495A1 244 aa14.41□□□□□ -0.1
SQSTM1-215ENST00000514093 TMEM88Q6PEY1 159 aa14.41□□□□□ -0.1
SQSTM1-215ENST00000514093 NRG4Q8WWG1 115 aa14.41□□□□□ -0.1
SQSTM1-215ENST00000514093 NEU1Q99519 415 aa14.41□□□□□ -0.1
SQSTM1-215ENST00000514093 NIPSNAP3BQ9BS92 247 aa14.41□□□□□ -0.1
SQSTM1-215ENST00000514093 FNDC4Q9H6D8 234 aaPredicted RBP14.41□□□□□ -0.1
SQSTM1-215ENST00000514093 A0A0A6YYH2 397 aa14.4□□□□□ -0.1
SQSTM1-215ENST00000514093 A6NJ64 397 aa14.4□□□□□ -0.1
SQSTM1-215ENST00000514093 ZNF705FA8MVS1 300 aaPredicted RBP14.4□□□□□ -0.1
SQSTM1-215ENST00000514093 IGKV3-20P01619 116 aa14.4□□□□□ -0.1
SQSTM1-215ENST00000514093 ZNF705DP0CH99 300 aaPredicted RBP14.4□□□□□ -0.1
SQSTM1-215ENST00000514093 ZNF705BP0CI00 300 aaPredicted RBP14.4□□□□□ -0.1
SQSTM1-215ENST00000514093 TBC1D26Q86UD7 250 aa14.4□□□□□ -0.1
SQSTM1-215ENST00000514093 RNF167Q9H6Y7 350 aa14.4□□□□□ -0.1
SQSTM1-215ENST00000514093 TMEM189A5PLL7 270 aa14.39□□□□□ -0.11
SQSTM1-215ENST00000514093 FAM90A26D6RGX4 464 aa14.39□□□□□ -0.11
SQSTM1-215ENST00000514093 DEFB1P60022 68 aa14.39□□□□□ -0.11
SQSTM1-215ENST00000514093 KCTD21Q4G0X4 260 aa14.39□□□□□ -0.11
SQSTM1-215ENST00000514093 C16orf54Q6UWD8 224 aa14.39□□□□□ -0.11
SQSTM1-215ENST00000514093 OR5H2Q8NGV7 314 aa14.39□□□□□ -0.11
SQSTM1-215ENST00000514093 OR6F1Q8NGZ6 308 aa14.39□□□□□ -0.11
SQSTM1-215ENST00000514093 GLMPQ8WWB7 406 aa14.39□□□□□ -0.11
SQSTM1-215ENST00000514093 TMED3Q9Y3Q3 217 aa14.39□□□□□ -0.11
SQSTM1-215ENST00000514093 U3KQE9 123 aa14.39□□□□□ -0.11
SQSTM1-215ENST00000514093 IGKV1-17P01599 117 aa14.38□□□□□ -0.11
SQSTM1-215ENST00000514093 RNASE2P10153 161 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-215ENST00000514093 PSMB9P28065 219 aa14.38□□□□□ -0.11
SQSTM1-215ENST00000514093 OPRK1P41145 380 aa14.38□□□□□ -0.11
SQSTM1-215ENST00000514093 EIF2B2P49770 351 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-215ENST00000514093 SNRPD3P62318 126 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-215ENST00000514093 GDF5OSQ5U4N7 250 aa14.38□□□□□ -0.11
SQSTM1-215ENST00000514093 SSR3Q9UNL2 185 aa14.38□□□□□ -0.11
SQSTM1-215ENST00000514093 RFNGQ9Y644 331 aa14.38□□□□□ -0.11
SQSTM1-215ENST00000514093 SMIM9A6NGZ8 99 aa14.37□□□□□ -0.11
SQSTM1-215ENST00000514093 SCAND1P57086 179 aa14.37□□□□□ -0.11
SQSTM1-215ENST00000514093 SLC35G3Q8N808 338 aa14.37□□□□□ -0.11
SQSTM1-215ENST00000514093 OR4X1Q8NH49 305 aa14.37□□□□□ -0.11
SQSTM1-215ENST00000514093 CNBD2Q96M20 576 aa14.37□□□□□ -0.11
SQSTM1-215ENST00000514093 YTHDF1Q9BYJ9 559 aaKnown RBP14.37□□□□□ -0.11
SQSTM1-215ENST00000514093 HLA-DRB4P13762 266 aa14.36□□□□□ -0.11
SQSTM1-215ENST00000514093 ETV6P41212 452 aa14.36□□□□□ -0.11
SQSTM1-215ENST00000514093 AP2S1P53680 142 aaPredicted RBP14.36□□□□□ -0.11
SQSTM1-215ENST00000514093 C6orf223Q8N319 242 aa14.36□□□□□ -0.11
SQSTM1-215ENST00000514093 FAM212BQ9NTI7 297 aaPredicted RBP14.36□□□□□ -0.11
SQSTM1-215ENST00000514093 ANAPC10Q9UM13 185 aa14.36□□□□□ -0.11
SQSTM1-215ENST00000514093 HLA-DRB4X5D2U9 266 aa14.36□□□□□ -0.11
SQSTM1-215ENST00000514093 NBDYA0A0U1RRE5 68 aa14.35□□□□□ -0.11
SQSTM1-215ENST00000514093 CORTO00230 105 aa14.35□□□□□ -0.11
SQSTM1-215ENST00000514093 HNRNPCP07910 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
SQSTM1-215ENST00000514093 HLA-DMAP28067 261 aa14.35□□□□□ -0.11
SQSTM1-215ENST00000514093 SUB1P53999 127 aaKnown RBP eCLIP14.35□□□□□ -0.11
SQSTM1-215ENST00000514093 TAS2R46P59540 309 aa14.35□□□□□ -0.11
SQSTM1-215ENST00000514093 ATG101Q9BSB4 218 aa14.35□□□□□ -0.11
SQSTM1-215ENST00000514093 BLOC1S6Q9UL45 172 aa14.35□□□□□ -0.11
SQSTM1-215ENST00000514093 A0A0B4J293 547 aa14.34□□□□□ -0.11
SQSTM1-215ENST00000514093 S100GP29377 79 aa14.34□□□□□ -0.11
SQSTM1-215ENST00000514093 HRH1P35367 487 aa14.34□□□□□ -0.11
SQSTM1-215ENST00000514093 HOXA1P49639 335 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-215ENST00000514093 SPATA12Q7Z6I5 190 aa14.34□□□□□ -0.11
SQSTM1-215ENST00000514093 LYSMD2Q8IV50 215 aa14.34□□□□□ -0.11
SQSTM1-215ENST00000514093 NRN1Q9NPD7 142 aa14.34□□□□□ -0.11
SQSTM1-215ENST00000514093 YTHDF2Q9Y5A9 579 aaKnown RBP14.34□□□□□ -0.11
SQSTM1-215ENST00000514093 TEX48A0A1B0GUV7 120 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms