RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 CLEC3BP05452 202 aa7.89□□□□□ -1.15
NEDD9-214ENST00000513989 METTL15P1P0C7V9 234 aa7.89□□□□□ -1.15
NEDD9-214ENST00000513989 LYL1P12980 280 aa7.89□□□□□ -1.15
NEDD9-214ENST00000513989 RPL12P30050 165 aaKnown RBP7.89□□□□□ -1.15
NEDD9-214ENST00000513989 Q56UQ5 140 aa7.89□□□□□ -1.15
NEDD9-214ENST00000513989 ACSM6Q6P461 480 aa7.89□□□□□ -1.15
NEDD9-214ENST00000513989 C10orf99Q6UWK7 81 aa7.89□□□□□ -1.15
NEDD9-214ENST00000513989 TMEM14EPQ6UXP3 125 aa7.89□□□□□ -1.15
NEDD9-214ENST00000513989 TCTE3Q8IZS6 198 aa7.89□□□□□ -1.15
NEDD9-214ENST00000513989 TMEM252Q8N6L7 170 aa7.89□□□□□ -1.15
NEDD9-214ENST00000513989 C11orf44Q8N8P7 122 aa7.89□□□□□ -1.15
NEDD9-214ENST00000513989 SCARB1Q8WTV0 552 aa7.89□□□□□ -1.15
NEDD9-214ENST00000513989 DPF1Q92782 380 aa7.89□□□□□ -1.15
NEDD9-214ENST00000513989 SLC35E1Q96K37 410 aa7.89□□□□□ -1.15
NEDD9-214ENST00000513989 OR4C12Q96R67 309 aa7.89□□□□□ -1.15
NEDD9-214ENST00000513989 CITED2Q99967 270 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-214ENST00000513989 TRAV30A0A087WSZ9 112 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.88□□□□□ -1.15
NEDD9-214ENST00000513989 H0YIZ8 118 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 NUPL2O15504 423 aaKnown RBP7.88□□□□□ -1.15
NEDD9-214ENST00000513989 CST7O76096 145 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 FABP1P07148 127 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 MFAP2P55001 183 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 CD69Q07108 199 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 RAB31Q13636 194 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 TCTEX1D4Q5JR98 221 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 ZNF343Q6P1L6 599 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 SPSB3Q6PJ21 355 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 C19orf35Q6ZS72 473 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 LCNL1Q6ZST4 164 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 LILRB2Q8N423 598 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 TMEM217Q8N7C4 229 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 UBAC2Q8NBM4 344 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 OR1S2Q8NGQ3 325 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 MYOZ3Q8TDC0 251 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 ST6GAL2Q96JF0 529 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 C11orf1Q9H5F2 150 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 NPVFQ9HCQ7 196 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 PEF1Q9UBV8 284 aaKnown RBP7.88□□□□□ -1.15
NEDD9-214ENST00000513989 DMRT1Q9Y5R6 373 aa7.88□□□□□ -1.15
NEDD9-214ENST00000513989 TRAV14DV4A0A0A6YYC5 116 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 IGHV3-21A0A0B4J1V1 117 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 SMCO3A2RU48 225 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 HMSDA8MTL9 139 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 FNDC10F2Z333 226 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 K7EIM0 57 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 GNG7O60262 68 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 DFFBO76075 338 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 IGHV3-11P01762 117 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 HSPB1P04792 205 aaKnown RBP7.87□□□□□ -1.15
NEDD9-214ENST00000513989 LGALS1P09382 135 aaKnown RBP7.87□□□□□ -1.15
NEDD9-214ENST00000513989 FCGR2BP31994 310 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-214ENST00000513989 AP2S1P53680 142 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-214ENST00000513989 RUNX1Q01196 453 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 EWSR1Q01844 656 aaKnown RBP eCLIP7.87□□□□□ -1.15
NEDD9-214ENST00000513989 KIAA0141Q14154 515 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-214ENST00000513989 NSUN5P1Q3KNT7 163 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 Q5BKY6 102 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 TREML4Q6UXN2 200 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 CLEC19AQ6UXS0 136 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 ACOT7LQ6ZUV0 252 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 SLC16A13Q7RTY0 426 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 TMEM116Q8NCL8 245 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 KLHL30-AS1Q8NEE0 82 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 OR4F17Q8NGA8 305 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 OR4X1Q8NH49 305 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 ZNF502Q8TBZ5 544 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 TMEM170AQ8WVE7 144 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 C4orf3Q8WVX3 66 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 BSCL2Q96G97 398 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-214ENST00000513989 HYLS1Q96M11 299 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 OR4F4Q96R69 305 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 CITED1Q99966 193 aa7.87□□□□□ -1.15
NEDD9-214ENST00000513989 A0A1W2PRX2 142 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 IGSF23A1L1A6 192 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 ANKRD34BA5PLL1 514 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 MFSD2BA6NFX1 497 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 GGCTO75223 188 aaKnown RBP7.86□□□□□ -1.15
NEDD9-214ENST00000513989 CLN5O75503 358 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 IFNA5P01569 189 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 ZP3P21754 424 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 KRTAP10-3P60369 221 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 DLK1P80370 383 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 AKR1C1Q04828 323 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 RELQ04864 619 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-214ENST00000513989 SLC38A11Q08AI6 406 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 GAMTQ14353 236 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 MLANAQ16655 118 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 FAM106AQ4KMX7 169 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 OR1N2Q8NGR9 330 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 NPIPB3Q92617 1050 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 ACY3Q96HD9 319 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 AQP10Q96PS8 301 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 OR5B12Q96R08 314 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 MFFQ9GZY8 342 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 GNB4Q9HAV0 340 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 UQCC1Q9NVA1 299 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 HSPB11Q9Y547 144 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 TNCP24821 2201 aa7.86□□□□□ -1.15
NEDD9-214ENST00000513989 NOTCH3Q9UM47 2321 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms