RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 CDC42BPGQ6DT37 1551 aa2.1□□□□□ -2.07
TRAPPC13-208ENST00000505553 ROBO3Q96MS0 1386 aa2.1□□□□□ -2.07
TRAPPC13-208ENST00000505553 CROCC2H7BZ55 1655 aa2.1□□□□□ -2.07
TRAPPC13-208ENST00000505553 UTRNP46939 3433 aa2.1□□□□□ -2.07
TRAPPC13-208ENST00000505553 VPS37CA5D8V6 355 aaPredicted RBP2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 LEPROTO15243 131 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 SULT1A3P0DMM9 295 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 SULT1A4P0DMN0 295 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 GOLT1AQ6ZVE7 132 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 LYPD1Q8N2G4 141 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 OR5C1Q8NGR4 320 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 OR13C6PQ8NH95 151 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 SLC7A6Q92536 515 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 FGF13Q92913 245 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 GPR146Q96CH1 333 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 TVP23CQ96ET8 276 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 HOPXQ9BPY8 73 aaPredicted RBP2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 BOLA2Q9H3K6 86 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 FAM215AQ9Y5M1 114 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 KIF1AQ12756 1690 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 ANKRD30AQ9BXX3 1397 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 NRAPQ86VF7 1730 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 NAIPQ13075 1403 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 MYOM3Q5VTT5 1437 aa2.09□□□□□ -2.07
TRAPPC13-208ENST00000505553 RGPD3A6NKT7 1758 aaPredicted RBP2.09□□□□□ -2.08
TRAPPC13-208ENST00000505553 RGPD4Q7Z3J3 1758 aa2.09□□□□□ -2.08
TRAPPC13-208ENST00000505553 A0A0J9YW62 118 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 A0A1W2PNM2 257 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 IRGMA1A4Y4 181 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 HMGB3O15347 200 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 CREBL2O60519 120 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 RNASE2P10153 161 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 IFI30P13284 250 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 ALDH3A1P30838 453 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 TCTAP57738 103 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 RPL18Q07020 188 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 AADACL3Q5VUY0 350 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 TCF24Q7RTU0 167 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 LHFPL1Q86WI0 220 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 OR4C16Q8NGL9 310 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 ZHX1-C8orf76Q96EF9 292 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 UTP11Q9Y3A2 253 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 MINOS1-NBL1R4GNA1 71 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 TOPAZ1Q8N9V7 1692 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 NRXN3Q9Y4C0 1643 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 ABCA3Q99758 1704 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 TRGV5A0A0B4J1U4 118 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 A0A0J9YX75 114 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 TRAPPC13A5PLN9 417 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 C11orf86A6NJI1 115 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 J3QRK9 145 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 GNRH2O43555 120 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 CTSGP08311 255 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 ZNF728P0DKX0 622 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 PSMB8P28062 276 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 EMP1P54849 157 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 C3orf33Q6P1S2 294 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 ZNF705AQ6ZN79 300 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 SMIM15Q7Z3B0 74 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 C12orf45Q8N5I9 185 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 C2orf50Q96LR7 162 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 GINS3Q9BRX5 216 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 DERL1Q9BUN8 251 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 BIN3Q9NQY0 253 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 TVP23BQ9NYZ1 205 aa2.08□□□□□ -2.08
TRAPPC13-208ENST00000505553 IQGAP3Q86VI3 1631 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 IGKV1D-17A0A075B6S4 117 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 A0A1B0GV72 72 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 MDFIC2A0A1B0GVS7 189 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 GGT3PA6NGU5 568 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 FABP5P3A8MUU1 101 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 G3V2T6 193 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 IGKV1-17P01599 117 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 IGKV1-5P01602 117 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 GZMHP20718 246 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 MSNP26038 577 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 TAS2R41P59536 307 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 GNG3P63215 75 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 MEF2BQ02080 365 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 TSNQ15631 228 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 MOGQ16653 247 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 SPANXN3Q5MJ09 141 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 Q6Q795 121 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 Q6ZS52 159 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 H1FXQ92522 213 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 ZNF471Q9BX82 626 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 PCBD2Q9H0N5 130 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 PSORS1C2Q9UIG4 136 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 COL1A2P08123 1366 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 ATP7BP35670 1465 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 NRXN1Q9ULB1 1477 aa2.07□□□□□ -2.08
TRAPPC13-208ENST00000505553 ARHGEF28Q8N1W1 1705 aaKnown RBP2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 NLRC5Q86WI3 1866 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 PDE4DIPQ5VU43 2346 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 IGLV10-54A0A075B6I4 117 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 A0A1W2PNN7 141 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 S1PR2O95136 353 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 IGHV3-7P01780 117 aa2.06□□□□□ -2.08
TRAPPC13-208ENST00000505553 C1QBP02746 253 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms