RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MAST2Q6P0Q8 1798 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 ALPK3Q96L96 1907 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 IGLV3-10A0A075B6K4 115 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 IGHV3OR16-10A0A075B7F0 116 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 INS-IGF2F8WCM5 200 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 ZNF32P17041 273 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 SNRPD3P62318 126 aaKnown RBP3.68□□□□□ -1.82
NIPBL-204ENST00000504430 ZNF329Q86UD4 541 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 Q8N7P7 452 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 NPBQ8NG41 125 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 NAT14Q8WUY8 206 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 FUT9Q9Y231 359 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 LRP4O75096 1905 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 TRAV13-1A0A0B4J241 112 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 OOSP1A8MZH6 123 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 HLA-DMBP28068 263 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 MYL5Q02045 173 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 ZNF101Q8IZC7 436 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 LINC01006Q8NI28 216 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 ITLN2Q8WWU7 325 aaPredicted RBP3.68□□□□□ -1.82
NIPBL-204ENST00000504430 TBL1YQ9BQ87 522 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 HBBP68871 147 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 TMEM183BQ1AE95 376 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 TMEM183AQ8IXX5 376 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 PLPP5Q8NEB5 264 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 SHANK2-AS3Q9BTD1 123 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 TAC3Q9UHF0 121 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 GRIN2AQ12879 1464 aa3.68□□□□□ -1.82
NIPBL-204ENST00000504430 PHOX2AO14813 284 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 HIST1H2BOP23527 126 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 HIST1H2BBP33778 126 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 HIST1H2BDP58876 126 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 HERVK_113P61574 105 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 HIST1H2BCP62807 126 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 HIST2H2BEQ16778 126 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 LGALS9BQ3B8N2 356 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 C2orf83Q53S99 150 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.67□□□□□ -1.82
NIPBL-204ENST00000504430 CASC10Q5T4H9 136 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 LGALS9CQ6DKI2 356 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 C2orf66Q6UXQ4 117 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 SCXQ7RTU7 201 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 HIST1H2BHQ93079 126 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 HIST1H2BNQ99877 126 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 HIST1H2BMQ99879 126 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 BCORL1Q5H9F3 1711 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 CRYGSP22914 178 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 FAM104BQ5XKR9 115 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 Q8N377 158 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 RNF182Q8N6D2 247 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 C15orf40Q8WUR7 153 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 PHLDA3Q9Y5J5 127 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 TOPBP1Q92547 1522 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.67□□□□□ -1.82
NIPBL-204ENST00000504430 TRBV7-6A0A0J9YX20 115 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 PRM2P04554 102 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 LGALS3P17931 250 aaKnown RBP3.67□□□□□ -1.82
NIPBL-204ENST00000504430 IZUMO2Q6UXV1 221 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 OR8A1Q8NGG7 326 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 LAMTOR3Q9UHA4 124 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 ZNF835Q9Y2P0 537 aa3.67□□□□□ -1.82
NIPBL-204ENST00000504430 KLK5Q9Y337 293 aaPredicted RBP3.67□□□□□ -1.82
NIPBL-204ENST00000504430 MYH13Q9UKX3 1938 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 MYOM2P54296 1465 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 ARHGAP35Q9NRY4 1499 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 SRP19P09132 144 aaKnown RBP3.66□□□□□ -1.82
NIPBL-204ENST00000504430 CFC1P0CG37 223 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 TPPP2P59282 170 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 TIFABQ6ZNK6 161 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 MDFICQ9P1T7 246 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 LSM2Q9Y333 95 aaKnown RBP3.66□□□□□ -1.82
NIPBL-204ENST00000504430 ZFYVE16Q7Z3T8 1539 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 TRBV20-1A0A075B6N2 111 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 IGHV1-58A0A0C4DH39 117 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 C11orf94C9JXX5 98 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 CST7O76096 145 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 ZNF93P35789 620 aaPredicted RBP3.66□□□□□ -1.82
NIPBL-204ENST00000504430 CSN1S1P47710 185 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 UBA52P62987 128 aaKnown RBP3.66□□□□□ -1.82
NIPBL-204ENST00000504430 CLLU1Q5K131 121 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 SOSTDC1Q6X4U4 206 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 LSM10Q969L4 123 aaKnown RBP3.66□□□□□ -1.82
NIPBL-204ENST00000504430 V9GYS6 101 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 NEO1Q92859 1461 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 KDM5DQ9BY66 1539 aa3.66□□□□□ -1.82
NIPBL-204ENST00000504430 MYO5AQ9Y4I1 1855 aaKnown RBP3.66□□□□□ -1.82
NIPBL-204ENST00000504430 DPTQ07507 201 aa3.65□□□□□ -1.82
NIPBL-204ENST00000504430 SS18Q15532 418 aa3.65□□□□□ -1.82
NIPBL-204ENST00000504430 C22orf39Q6P5X5 142 aa3.65□□□□□ -1.82
NIPBL-204ENST00000504430 KLHL30-AS1Q8NEE0 82 aa3.65□□□□□ -1.82
NIPBL-204ENST00000504430 ELSPBP1Q96BH3 223 aa3.65□□□□□ -1.82
NIPBL-204ENST00000504430 TUBA4BQ9H853 241 aa3.65□□□□□ -1.82
NIPBL-204ENST00000504430 TNS2Q63HR2 1409 aa3.65□□□□□ -1.82
NIPBL-204ENST00000504430 FMN1Q68DA7 1419 aa3.65□□□□□ -1.82
NIPBL-204ENST00000504430 ZNFX1Q9P2E3 1918 aaKnown RBP3.65□□□□□ -1.82
NIPBL-204ENST00000504430 LEPROTO15243 131 aa3.65□□□□□ -1.83
NIPBL-204ENST00000504430 OR1I1O60431 355 aa3.65□□□□□ -1.83
NIPBL-204ENST00000504430 ZNF432O94892 652 aa3.65□□□□□ -1.83
NIPBL-204ENST00000504430 RPL22P35268 128 aaKnown RBP3.65□□□□□ -1.83
NIPBL-204ENST00000504430 NMUP48645 174 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms