RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ZNF57Q68EA5 555 aaPredicted RBP1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 UNQ5815/PRO19632Q6UWF5 114 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 TIFABQ6ZNK6 161 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 Q6ZRU5 148 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 PRSS41Q7RTY9 318 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF550Q7Z398 422 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 HSD11B1LQ7Z5J1 315 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 MRPL55Q7Z7F7 128 aaKnown RBP1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 ATOH7Q8N100 152 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 C10orf111Q8N326 155 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 TOMM5Q8N4H5 51 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 SIGLECL1Q8N7X8 197 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 KLHL30-AS1Q8NEE0 82 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR4F17Q8NGA8 305 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR10P1Q8NGE3 313 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR51G1Q8NGK1 321 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR10D3Q8NH80 312 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR4A5Q8NH83 315 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 VSTM2AQ8TAG5 236 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 SCGB1C1Q8TD33 95 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 RPS4Y2Q8TD47 263 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 CLDN23Q96B33 292 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 ELSPBP1Q96BH3 223 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 GNPNAT1Q96EK6 184 aaPredicted RBP1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 LINC00526Q96FQ7 95 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 SEC22AQ96IW7 307 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR4F4Q96R69 305 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 LINC01587Q99440 93 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 OVOL2Q9BRP0 275 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF670Q9BS34 389 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 SFXN3Q9BWM7 321 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 TMEM222Q9H0R3 208 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 LIME1Q9H400 295 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 NAA60Q9H7X0 242 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 Q9H8V8 135 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 REEP1Q9H902 201 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 JPT2Q9H910 190 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 TNFRSF19Q9NS68 423 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 CA10Q9NS85 328 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 CLCF1Q9UBD9 225 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 KLK11Q9UBX7 282 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 Q9UF83 564 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 AK3Q9UIJ7 227 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 LSM7Q9UK45 103 aaKnown RBP1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 PILRAQ9UKJ1 303 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 COQ4Q9Y3A0 265 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 KLF12Q9Y4X4 402 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 KIF25-AS1Q9Y6Z4 181 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 UBR1Q8IWV7 1749 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 C3P01024 1663 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 TECPR2O15040 1411 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 A0A087X0T9 212 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRAV19A0A0A6YYK7 116 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 CCL15-CCL14A0A0B4J2E2 113 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRBV7-6A0A0J9YX20 115 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 FAM240AA0A1B0GVK7 77 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 LOC285095A0A1B0GVY8 99 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 A0A1W2PPM0 123 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 IRGMA1A4Y4 181 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 ODAMA1E959 279 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF850A8MQ14 1090 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 UMAD1C9J7I0 102 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 LY6LH3BQJ8 138 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 CCDC179H3BU77 68 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 GABARAPH6UMI1 98 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 APOC4-APOC2K7ER74 178 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 CCL21O00585 134 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 SLC17A2O00624 439 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 CDX4O14627 284 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 SH2D1BO14796 132 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 CXCL13O43927 109 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF253O75346 499 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 ARL6IP5O75915 188 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 NDUFB2O95178 105 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 HRASP01112 189 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 EIF4EP06730 217 aaKnown RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 IGLC6P0CF74 106 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 LINC00694P0DN24 101 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 PTHLHP12272 177 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 FAUP35544 74 aaKnown RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 PPP1CCP36873 323 aaKnown RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 CRISP3P54108 245 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 CLDN17P56750 224 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 LSM3P62310 102 aaKnown RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 SP4Q02446 784 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 SLC25A11Q02978 314 aaKnown RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF90Q03938 601 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 SSBP1Q04837 148 aaKnown RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 PRDX1Q06830 199 aaKnown RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 IL15RAQ13261 267 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 EIF3IQ13347 325 aaKnown RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 PNOCQ13519 176 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 C1DQ13901 141 aaKnown RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 C12orf74Q32Q52 190 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 TDRG1Q3Y452 100 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 SPATA45Q537H7 98 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 Q56UQ5 140 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 SPRNQ5BIV9 151 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 FAM201AQ5SY85 155 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 BVES-AS1Q5T3Y7 98 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms