RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 MLXQ9UH92 298 aa4.11□□□□□ -1.75
SPTA1-209ENST00000498708 UBQLN2Q9UHD9 624 aa4.11□□□□□ -1.75
SPTA1-209ENST00000498708 IGKV1D-8A0A087WSZ0 117 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 LOC102724200A0A096LPH7 203 aaPredicted RBP4.1□□□□□ -1.75
SPTA1-209ENST00000498708 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.1□□□□□ -1.75
SPTA1-209ENST00000498708 TMEM272A0A1B0GTI8 110 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 FAM223BA6NKX1 122 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 K7EP13 123 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 SLC17A2O00624 439 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 RGS10O43665 173 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 AIREO43918 545 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 GGCTO75223 188 aaKnown RBP4.1□□□□□ -1.75
SPTA1-209ENST00000498708 SNAPC5O75971 98 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 REG1AP05451 166 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 FCGR3AP08637 254 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 UCHL1P09936 223 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 METTL15P1P0C7V9 234 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 SAA1P0DJI8 122 aaPredicted RBP4.1□□□□□ -1.75
SPTA1-209ENST00000498708 RRASP10301 218 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 IL7P13232 177 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 GNB3P16520 340 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 CBLN1P23435 193 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 CRHBPP24387 322 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 UCP1P25874 307 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 DUTP33316 252 aaKnown RBP4.1□□□□□ -1.75
SPTA1-209ENST00000498708 KIR2DS2P43631 304 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 SERPINB10P48595 397 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 PTTG1IPP53801 180 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 UBE2G2P60604 165 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 UBE2KP61086 200 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 ARFRP1Q13795 201 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 C15orf32Q32M92 178 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 BTNL8Q6UX41 500 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 SLC16A13Q7RTY0 426 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 NOXA1Q86UR1 476 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 FAM223AQ8IWN6 122 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 SELENOHQ8IZQ5 122 aaKnown RBP4.1□□□□□ -1.75
SPTA1-209ENST00000498708 TCTE3Q8IZS6 198 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 TMEM61Q8N0U2 210 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 ZNF645Q8N7E2 425 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 TEX45Q8NA69 505 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 UXS1Q8NBZ7 420 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.1□□□□□ -1.75
SPTA1-209ENST00000498708 OR56B1Q8NGI3 324 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 OR4A4PQ8NGN8 299 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 PHLDA1Q8WV24 401 aaPredicted RBP4.1□□□□□ -1.75
SPTA1-209ENST00000498708 SMIM12Q96EX1 92 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 OVOL2Q9BRP0 275 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 GGTLC1Q9BX51 225 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 HSF4Q9ULV5 492 aa4.1□□□□□ -1.75
SPTA1-209ENST00000498708 FLG2Q5D862 2391 aaPredicted RBP4.09□□□□□ -1.75
SPTA1-209ENST00000498708 TRBV6-7A0A0A0MS04 114 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 TRBV9A0A0B4J1U6 114 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 A0A1B0GV72 72 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 SMIM30A4D0T7 59 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 HELTA6NFD8 242 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 E7EUB6 86 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 RGS5O15539 181 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 EIF3GO75821 320 aaKnown RBP eCLIP4.09□□□□□ -1.75
SPTA1-209ENST00000498708 IL6RP08887 468 aaPredicted RBP4.09□□□□□ -1.75
SPTA1-209ENST00000498708 INAFM2P0DMQ5 153 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 AREGP15514 252 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 RPA2P15927 270 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 RPL35AP18077 110 aaKnown RBP4.09□□□□□ -1.75
SPTA1-209ENST00000498708 NFYAP23511 347 aaPredicted RBP4.09□□□□□ -1.75
SPTA1-209ENST00000498708 RPL27AP46776 148 aaKnown RBP4.09□□□□□ -1.75
SPTA1-209ENST00000498708 TMBIM6P55061 237 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 RPL30P62888 115 aaKnown RBP4.09□□□□□ -1.75
SPTA1-209ENST00000498708 SPHARQ15513 63 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 DEFB135Q30KP9 77 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 ZNF585BQ52M93 769 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 ZNF57Q68EA5 555 aaPredicted RBP4.09□□□□□ -1.75
SPTA1-209ENST00000498708 TMEM91Q6ZNR0 172 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 LYG2Q86SG7 212 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 LAX1Q8IWV1 398 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 MMD2Q8IY49 270 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 C12orf45Q8N5I9 185 aaPredicted RBP4.09□□□□□ -1.75
SPTA1-209ENST00000498708 TTC9CQ8N5M4 171 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 CCDC71LQ8N9Z2 235 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 NECAP1Q8NC96 275 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 TCTEX1D2Q8WW35 142 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 FAM3DQ96BQ1 224 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 RAB3CQ96E17 227 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 SPIN2AQ99865 258 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 SPIN2BQ9BPZ2 258 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 CABLES2Q9BTV7 478 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 NXF2Q9GZY0 626 aaKnown RBP4.09□□□□□ -1.75
SPTA1-209ENST00000498708 CSTL1Q9H114 145 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 FAM212BQ9NTI7 297 aaPredicted RBP4.09□□□□□ -1.75
SPTA1-209ENST00000498708 TECRQ9NZ01 308 aaKnown RBP4.09□□□□□ -1.75
SPTA1-209ENST00000498708 SCP2D1Q9UJQ7 156 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 SSR3Q9UNL2 185 aa4.09□□□□□ -1.75
SPTA1-209ENST00000498708 STRAPQ9Y3F4 350 aaKnown RBP4.09□□□□□ -1.75
SPTA1-209ENST00000498708 IGHV3OR16-8A0A075B7F1 116 aa4.08□□□□□ -1.76
SPTA1-209ENST00000498708 IGHV3-21A0A0B4J1V1 117 aa4.08□□□□□ -1.76
SPTA1-209ENST00000498708 TRAV25A0A0B4J276 109 aa4.08□□□□□ -1.76
SPTA1-209ENST00000498708 FAM240BA0A1B0GVZ2 78 aa4.08□□□□□ -1.76
SPTA1-209ENST00000498708 TMEM213A2RRL7 107 aa4.08□□□□□ -1.76
SPTA1-209ENST00000498708 METTL21EPA6NDL7 271 aa4.08□□□□□ -1.76
SPTA1-209ENST00000498708 C5orf52A6NGY3 159 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms