RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 MSMO1Q15800 293 aa9.4□□□□□ -0.9
EXOSC3-207ENST00000490516 ESRGQ1W209 222 aa9.4□□□□□ -0.9
EXOSC3-207ENST00000490516 RNASE12Q5GAN4 147 aaKnown RBP9.4□□□□□ -0.9
EXOSC3-207ENST00000490516 C16orf54Q6UWD8 224 aa9.4□□□□□ -0.9
EXOSC3-207ENST00000490516 NANOGP1Q8N7R0 232 aa9.4□□□□□ -0.9
EXOSC3-207ENST00000490516 OR4B1Q8NGF8 309 aa9.4□□□□□ -0.9
EXOSC3-207ENST00000490516 OR13F1Q8NGS4 319 aa9.4□□□□□ -0.9
EXOSC3-207ENST00000490516 FNDC4Q9H6D8 234 aaPredicted RBP9.4□□□□□ -0.9
EXOSC3-207ENST00000490516 TNFRSF18Q9Y5U5 241 aa9.4□□□□□ -0.9
EXOSC3-207ENST00000490516 A0A087WTM6 91 aa9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 SNAPC5O75971 98 aa9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 KRASP01116 189 aa9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 PLA2G1BP04054 148 aaKnown RBP9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 G6PCP35575 357 aa9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 NKX2-1P43699 371 aaPredicted RBP9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 HOXA1P49639 335 aaPredicted RBP9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 AADACL3Q5VUY0 350 aa9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 TPRA1Q86W33 373 aa9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 ZNF114Q8NC26 417 aa9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 ZBTB34Q8NCN2 500 aa9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 NUDCD2Q8WVJ2 157 aa9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 TMEM203Q969S6 136 aa9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 TMEM230Q96A57 120 aa9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 SLC5A7Q9GZV3 580 aa9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 MAGT1Q9H0U3 335 aa9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 U3KQE9 123 aa9.39□□□□□ -0.91
EXOSC3-207ENST00000490516 ZNF705GA8MUZ8 300 aaPredicted RBP9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 ATP8B1O43520 1251 aa9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 FCGR2CP31995 323 aa9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 AP2S1P53680 142 aaPredicted RBP9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 CDNFQ49AH0 187 aa9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 TMEM91Q6ZNR0 172 aa9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 ZNF818PQ6ZRF7 136 aa9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 SAV1Q9H4B6 383 aaPredicted RBP9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 SEPSECSQ9HD40 501 aaKnown RBP9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 NRN1Q9NPD7 142 aa9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 MRPL36Q9P0J6 103 aaKnown RBP9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 ANXA10Q9UJ72 324 aa9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 PRNDQ9UKY0 176 aa9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 MRPS16Q9Y3D3 137 aaKnown RBP9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 V9GY05 133 aa9.38□□□□□ -0.91
EXOSC3-207ENST00000490516 M0QYG6 137 aa9.37□□□□□ -0.91
EXOSC3-207ENST00000490516 FXYD4P59646 89 aa9.37□□□□□ -0.91
EXOSC3-207ENST00000490516 AHSA2Q719I0 299 aa9.37□□□□□ -0.91
EXOSC3-207ENST00000490516 ZNF555Q8NEP9 628 aa9.37□□□□□ -0.91
EXOSC3-207ENST00000490516 FCGR1BQ92637 280 aa9.37□□□□□ -0.91
EXOSC3-207ENST00000490516 TMEM208Q9BTX3 173 aa9.37□□□□□ -0.91
EXOSC3-207ENST00000490516 TMEM70Q9BUB7 260 aa9.37□□□□□ -0.91
EXOSC3-207ENST00000490516 CBY3A6NI87 242 aa9.36□□□□□ -0.91
EXOSC3-207ENST00000490516 PPYP01298 95 aa9.36□□□□□ -0.91
EXOSC3-207ENST00000490516 LPAR6P43657 344 aa9.36□□□□□ -0.91
EXOSC3-207ENST00000490516 PSG9Q00887 426 aa9.36□□□□□ -0.91
EXOSC3-207ENST00000490516 HACD4Q5VWC8 232 aa9.36□□□□□ -0.91
EXOSC3-207ENST00000490516 OR4C16Q8NGL9 310 aa9.36□□□□□ -0.91
EXOSC3-207ENST00000490516 FCAMRQ8WWV6 532 aa9.36□□□□□ -0.91
EXOSC3-207ENST00000490516 GNPNAT1Q96EK6 184 aaPredicted RBP9.36□□□□□ -0.91
EXOSC3-207ENST00000490516 CLUHP3Q96NS8 147 aa9.36□□□□□ -0.91
EXOSC3-207ENST00000490516 C9orf16Q9BUW7 83 aa9.36□□□□□ -0.91
EXOSC3-207ENST00000490516 FKBP11Q9NYL4 201 aa9.36□□□□□ -0.91
EXOSC3-207ENST00000490516 TRAV26-1A0A087WT03 109 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 PLAC8L1A1L4L8 177 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 ERICH4A6NGS2 130 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 HNRNPCP07910 306 aaKnown RBP eCLIP9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 P0C879 139 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 RAB6AP20340 208 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 RORCP51449 518 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 ZNF79Q15937 498 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 TIGITQ495A1 244 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 FOXI2Q6ZQN5 318 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 PQLC1Q8N2U9 271 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 BPIFB6Q8NFQ5 453 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 LGALS14Q8TCE9 139 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 LINC00052Q96N35 136 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 ATG5Q9H1Y0 275 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 FAM30AQ9NZY2 134 aa9.35□□□□□ -0.91
EXOSC3-207ENST00000490516 A0A0J9YY99 117 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 METTL21EPA6NDL7 271 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 TMEM235A6NFC5 223 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 F6UB75 175 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 EBAG9O00559 213 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 SSX5O60225 188 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 CLN5O75503 358 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 OXTP01178 125 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 IGKV1-17P01599 117 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 CALRP27797 417 aaKnown RBP9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 OR5I1Q13606 314 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 MLANAQ16655 118 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 SPINK9Q5DT21 86 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 FAM78BQ5VT40 261 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 SIGLEC15Q6ZMC9 328 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 TMEM17Q86X19 198 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 LINC00528Q8N1L1 170 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 PSORS1C1Q9UIG5 152 aa9.34□□□□□ -0.91
EXOSC3-207ENST00000490516 FAT3Q8TDW7 4589 aa9.33□□□□□ -0.92
EXOSC3-207ENST00000490516 RLN1P04808 185 aa9.33□□□□□ -0.92
EXOSC3-207ENST00000490516 AZU1P20160 251 aa9.33□□□□□ -0.92
EXOSC3-207ENST00000490516 F2RP25116 425 aa9.33□□□□□ -0.92
EXOSC3-207ENST00000490516 RASSF2P50749 326 aa9.33□□□□□ -0.92
EXOSC3-207ENST00000490516 OR10A3P58181 314 aa9.33□□□□□ -0.92
EXOSC3-207ENST00000490516 ARPC4P59998 168 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms