RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 VWC2Q2TAL6 325 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 CYP2G1PQ6ZSU1 146 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 TMEM37Q8WXS4 190 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 RITA1Q96K30 269 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 P2RX4Q99571 388 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 PLXNB1O43157 2135 aa9.78□□□□□ -0.84
HDAC6-230ENST00000488543 H7BYZ3 331 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 RRHO14718 337 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 OPN1MWP04001 364 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 OPN1MW2P0DN77 364 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 OPN1MW3P0DN78 364 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 GPX4P36969 197 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-230ENST00000488543 PAX2Q02962 417 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 ATP6V1FQ16864 119 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 ZNF114Q8NC26 417 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 MAPK1IP1LQ8NDC0 245 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 OR4C13Q8NGP0 309 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 HEYLQ9NQ87 328 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-230ENST00000488543 ZNF257Q9Y2Q1 563 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 PRRC2AP48634 2157 aaKnown RBP9.77□□□□□ -0.85
HDAC6-230ENST00000488543 NAV3Q8IVL0 2385 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 TRBV24-1A0A075B6N3 115 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 TEX50A0A1B0GTY4 177 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 PRSS46E5RG02 174 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 PAX1P15863 534 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 KLRD1Q13241 179 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 CST9LP1Q5W188 147 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 OR11H6Q8NGC7 330 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 TMEM167AQ8TBQ9 72 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 FUT9Q9Y231 359 aa9.77□□□□□ -0.85
HDAC6-230ENST00000488543 IGHV3-72A0A0B4J1Y9 119 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 IGHV1-3A0A0C4DH29 117 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 A0A1W2PRD5 423 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 A0A1W2PRF3 423 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 A0A1W2PRM7 423 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 MC5RP33032 325 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 PRCDQ00LT1 54 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 MRGPRG-AS1Q2M3A8 158 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 A0A0U1RQK1 487 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 XKRY2A2RUG3 117 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 ODF3BA8MYP8 253 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 C11orf94C9JXX5 98 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 NDUFS8O00217 210 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 IFNA10P01566 189 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 AMBPP02760 352 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 PRTN3P24158 256 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 DEFB113Q30KQ7 82 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 KIR3DL3Q8N743 410 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 ZNF709Q8N972 641 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 ACTR3CQ9C0K3 210 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-230ENST00000488543 TMEM242Q9NWH2 141 aa9.76□□□□□ -0.85
HDAC6-230ENST00000488543 AMMECR1Q9Y4X0 333 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-230ENST00000488543 HIST1H1BP16401 226 aaKnown RBP9.75□□□□□ -0.85
HDAC6-230ENST00000488543 CDC34P49427 236 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-230ENST00000488543 CENPVQ7Z7K6 275 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-230ENST00000488543 OR4A5Q8NH83 315 aa9.75□□□□□ -0.85
HDAC6-230ENST00000488543 TIMM9Q9Y5J7 89 aa9.75□□□□□ -0.85
HDAC6-230ENST00000488543 ELOA3CA0A087WX78 387 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-230ENST00000488543 A0A1W2PPI3 338 aa9.75□□□□□ -0.85
HDAC6-230ENST00000488543 GNB1P62873 340 aa9.75□□□□□ -0.85
HDAC6-230ENST00000488543 RPP30P78346 268 aaKnown RBP9.75□□□□□ -0.85
HDAC6-230ENST00000488543 DEFA6Q01524 100 aa9.75□□□□□ -0.85
HDAC6-230ENST00000488543 TPTE2P1Q5T6R2 138 aa9.75□□□□□ -0.85
HDAC6-230ENST00000488543 SSMEM1Q8WWF3 244 aa9.75□□□□□ -0.85
HDAC6-230ENST00000488543 C14orf144Q96I85 54 aa9.75□□□□□ -0.85
HDAC6-230ENST00000488543 TPSG1Q9NRR2 321 aa9.75□□□□□ -0.85
HDAC6-230ENST00000488543 NOTCH2Q04721 2471 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 IGHV2-70DA0A0C4DH43 119 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 CGB1A6NKQ9 187 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 ENSAO43768 121 aaKnown RBP9.74□□□□□ -0.85
HDAC6-230ENST00000488543 NDUFB4O95168 129 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 CRYGBP07316 175 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 USF1P22415 310 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-230ENST00000488543 FAM78BQ5VT40 261 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 MIC13Q5XKP0 118 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 VMO1Q7Z5L0 202 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 MOB3BQ86TA1 216 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 SLC24A4Q8NFF2 622 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 OR1P1Q8NH06 330 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 OR5B3Q8NH48 314 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 HINT2Q9BX68 163 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 SIRPDQ9H106 197 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 SRD5A3Q9H8P0 318 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 NDUFA4L2Q9NRX3 87 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 FKBP11Q9NYL4 201 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 INSIG2Q9Y5U4 225 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 E7EUB6 86 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 SLC25A17O43808 307 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 CA2P00918 260 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 PF4P02776 101 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 NPY1RP25929 384 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 CNTFRP26992 372 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 RPL8P62917 257 aaKnown RBP9.74□□□□□ -0.85
HDAC6-230ENST00000488543 SPATA31B1PQ5VZV4 182 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 VSTM2AQ8TAG5 236 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 RPEQ96AT9 228 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 OR5B12Q96R08 314 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 CTDSP1Q9GZU7 261 aa9.74□□□□□ -0.85
HDAC6-230ENST00000488543 ZNF430Q9H8G1 570 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-230ENST00000488543 PLEKHA3Q9HB20 300 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms