RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 RND2P52198 227 aa22.65■■□□□ 1.22
VEGFA-211ENST00000476772 CRIP2P52943 208 aaPredicted RBP22.65■■□□□ 1.22
VEGFA-211ENST00000476772 Q6ZRG5 221 aa22.65■■□□□ 1.22
VEGFA-211ENST00000476772 LINC00527Q9UJ94 153 aa22.65■■□□□ 1.22
VEGFA-211ENST00000476772 TRIM77I1YAP6 450 aa22.64■■□□□ 1.21
VEGFA-211ENST00000476772 K7EIM0 57 aa22.64■■□□□ 1.21
VEGFA-211ENST00000476772 LY6G6DO95868 133 aa22.64■■□□□ 1.21
VEGFA-211ENST00000476772 FAM213BQ8TBF2 198 aa22.64■■□□□ 1.21
VEGFA-211ENST00000476772 SONP18583 2426 aaKnown RBP22.64■■□□□ 1.21
VEGFA-211ENST00000476772 TRAV41A0A0B4J266 112 aa22.63■■□□□ 1.21
VEGFA-211ENST00000476772 LINC00862A6NCI5 91 aa22.63■■□□□ 1.21
VEGFA-211ENST00000476772 RAB31Q13636 194 aa22.63■■□□□ 1.21
VEGFA-211ENST00000476772 C19orf54Q5BKX5 351 aa22.63■■□□□ 1.21
VEGFA-211ENST00000476772 FFAR4Q5NUL3 377 aa22.63■■□□□ 1.21
VEGFA-211ENST00000476772 TMEM160Q9NX00 188 aa22.63■■□□□ 1.21
VEGFA-211ENST00000476772 CYB5BO43169 146 aa22.62■■□□□ 1.21
VEGFA-211ENST00000476772 IGF1P05019 195 aa22.62■■□□□ 1.21
VEGFA-211ENST00000476772 PXDC1Q5TGL8 231 aa22.62■■□□□ 1.21
VEGFA-211ENST00000476772 MIC13Q5XKP0 118 aa22.62■■□□□ 1.21
VEGFA-211ENST00000476772 RPRMQ9NS64 109 aa22.62■■□□□ 1.21
VEGFA-211ENST00000476772 MXRA5Q9NR99 2828 aa22.62■■□□□ 1.21
VEGFA-211ENST00000476772 TEX46H3BTG2 121 aa22.62■■□□□ 1.21
VEGFA-211ENST00000476772 OR10J1P30954 320 aa22.62■■□□□ 1.21
VEGFA-211ENST00000476772 BLOC1S1P78537 153 aa22.62■■□□□ 1.21
VEGFA-211ENST00000476772 DUX5Q96PT3 197 aa22.62■■□□□ 1.21
VEGFA-211ENST00000476772 PXMP4Q9Y6I8 212 aa22.62■■□□□ 1.21
VEGFA-211ENST00000476772 TSPAN9O75954 239 aa22.61■■□□□ 1.21
VEGFA-211ENST00000476772 ZNF616Q08AN1 781 aa22.61■■□□□ 1.21
VEGFA-211ENST00000476772 TMEM41BQ5BJD5 291 aa22.61■■□□□ 1.21
VEGFA-211ENST00000476772 THAP8Q8NA92 274 aa22.61■■□□□ 1.21
VEGFA-211ENST00000476772 TMEM116Q8NCL8 245 aa22.61■■□□□ 1.21
VEGFA-211ENST00000476772 OR2J3O76001 311 aa22.6■■□□□ 1.21
VEGFA-211ENST00000476772 RAB2AP61019 212 aa22.6■■□□□ 1.21
VEGFA-211ENST00000476772 DEFA5Q01523 94 aa22.6■■□□□ 1.21
VEGFA-211ENST00000476772 SLC45A2Q9UMX9 530 aa22.6■■□□□ 1.21
VEGFA-211ENST00000476772 IGKV1D-37A0A075B6S9 117 aa22.59■■□□□ 1.21
VEGFA-211ENST00000476772 SOX15O60248 233 aa22.59■■□□□ 1.21
VEGFA-211ENST00000476772 STPG3Q8N7X2 389 aa22.59■■□□□ 1.21
VEGFA-211ENST00000476772 NOL4LQ96MY1 436 aaPredicted RBP22.59■■□□□ 1.21
VEGFA-211ENST00000476772 KCNIP2Q9NS61 270 aa22.59■■□□□ 1.21
VEGFA-211ENST00000476772 ZNF355PQ9NSJ1 428 aa22.59■■□□□ 1.21
VEGFA-211ENST00000476772 NDUFB8O95169 186 aa22.58■■□□□ 1.21
VEGFA-211ENST00000476772 RPL29P47914 159 aaKnown RBP22.58■■□□□ 1.21
VEGFA-211ENST00000476772 DPPA3Q6W0C5 159 aa22.58■■□□□ 1.21
VEGFA-211ENST00000476772 THYN1Q9P016 225 aa22.58■■□□□ 1.21
VEGFA-211ENST00000476772 ZFP92A6NM28 416 aa22.58■■□□□ 1.2
VEGFA-211ENST00000476772 YIF1AO95070 293 aa22.58■■□□□ 1.2
VEGFA-211ENST00000476772 TSPAN15O95858 294 aa22.58■■□□□ 1.2
VEGFA-211ENST00000476772 HIST1H1BP16401 226 aaKnown RBP22.58■■□□□ 1.2
VEGFA-211ENST00000476772 B2MP61769 119 aa22.58■■□□□ 1.2
VEGFA-211ENST00000476772 KLK9Q2XQG4 91 aa22.58■■□□□ 1.2
VEGFA-211ENST00000476772 RBMS3Q6XE24 437 aaKnown RBP22.58■■□□□ 1.2
VEGFA-211ENST00000476772 TMEM86BQ8N661 226 aa22.58■■□□□ 1.2
VEGFA-211ENST00000476772 BPIFCQ8NFQ6 507 aa22.58■■□□□ 1.2
VEGFA-211ENST00000476772 HRH4Q9H3N8 390 aa22.58■■□□□ 1.2
VEGFA-211ENST00000476772 KLK9Q9UKQ9 250 aa22.58■■□□□ 1.2
VEGFA-211ENST00000476772 S4R3C0 116 aa22.58■■□□□ 1.2
VEGFA-211ENST00000476772 AP4M1O00189 453 aa22.57■■□□□ 1.2
VEGFA-211ENST00000476772 GATA2P23769 480 aaPredicted RBP22.57■■□□□ 1.2
VEGFA-211ENST00000476772 PRR20EP86478 221 aa22.57■■□□□ 1.2
VEGFA-211ENST00000476772 PRR20CP86479 221 aa22.57■■□□□ 1.2
VEGFA-211ENST00000476772 PRR20DP86480 221 aa22.57■■□□□ 1.2
VEGFA-211ENST00000476772 PRR20BP86481 221 aa22.57■■□□□ 1.2
VEGFA-211ENST00000476772 PRR20AP86496 221 aa22.57■■□□□ 1.2
VEGFA-211ENST00000476772 CYP2G1PQ6ZSU1 146 aa22.57■■□□□ 1.2
VEGFA-211ENST00000476772 COMMD7Q86VX2 200 aa22.57■■□□□ 1.2
VEGFA-211ENST00000476772 OR4X1Q8NH49 305 aa22.57■■□□□ 1.2
VEGFA-211ENST00000476772 FBXL7Q9UJT9 491 aa22.57■■□□□ 1.2
VEGFA-211ENST00000476772 MFSD2BA6NFX1 497 aa22.56■■□□□ 1.2
VEGFA-211ENST00000476772 MBP02144 154 aa22.56■■□□□ 1.2
VEGFA-211ENST00000476772 CD99P14209 185 aa22.56■■□□□ 1.2
VEGFA-211ENST00000476772 GCSAMLQ5JQS6 135 aa22.56■■□□□ 1.2
VEGFA-211ENST00000476772 GSX1Q9H4S2 264 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-211ENST00000476772 SLC39A9Q9NUM3 307 aa22.56■■□□□ 1.2
VEGFA-211ENST00000476772 PFDN2Q9UHV9 154 aa22.56■■□□□ 1.2
VEGFA-211ENST00000476772 TCRBV4S1A1TA0A5B7 111 aa22.55■■□□□ 1.2
VEGFA-211ENST00000476772 LINC00869P0C866 280 aa22.55■■□□□ 1.2
VEGFA-211ENST00000476772 M6PRP20645 277 aa22.55■■□□□ 1.2
VEGFA-211ENST00000476772 ZNF90Q03938 601 aa22.55■■□□□ 1.2
VEGFA-211ENST00000476772 ACOT6Q3I5F7 207 aaPredicted RBP22.55■■□□□ 1.2
VEGFA-211ENST00000476772 TMEM95Q3KNT9 176 aa22.55■■□□□ 1.2
VEGFA-211ENST00000476772 RPP25LQ8N5L8 163 aaKnown RBP22.55■■□□□ 1.2
VEGFA-211ENST00000476772 OR10G4Q8NGN3 311 aa22.55■■□□□ 1.2
VEGFA-211ENST00000476772 OR10G9Q8NGN4 311 aa22.55■■□□□ 1.2
VEGFA-211ENST00000476772 OR10G7Q8NGN6 311 aa22.55■■□□□ 1.2
VEGFA-211ENST00000476772 MED9Q9NWA0 146 aa22.55■■□□□ 1.2
VEGFA-211ENST00000476772 TRBV9A0A0B4J1U6 114 aa22.55■■□□□ 1.2
VEGFA-211ENST00000476772 ZNF726P1Q15940 193 aa22.55■■□□□ 1.2
VEGFA-211ENST00000476772 RHOGP84095 191 aa22.54■■□□□ 1.2
VEGFA-211ENST00000476772 SSX7Q7RTT5 188 aa22.54■■□□□ 1.2
VEGFA-211ENST00000476772 LYPD6BQ8NI32 183 aa22.54■■□□□ 1.2
VEGFA-211ENST00000476772 RCC1LQ96I51 464 aaKnown RBP22.54■■□□□ 1.2
VEGFA-211ENST00000476772 MS4A10Q96PG2 267 aa22.54■■□□□ 1.2
VEGFA-211ENST00000476772 NPFFR1Q9GZQ6 430 aa22.54■■□□□ 1.2
VEGFA-211ENST00000476772 DNAJC9-AS1A6NH13 148 aa22.53■■□□□ 1.2
VEGFA-211ENST00000476772 ATP6V1G1O75348 118 aa22.53■■□□□ 1.2
VEGFA-211ENST00000476772 H2AFB1P0C5Y9 115 aa22.53■■□□□ 1.2
VEGFA-211ENST00000476772 PPIFP30405 207 aaKnown RBP22.53■■□□□ 1.2
VEGFA-211ENST00000476772 TRGV9Q99603 122 aa22.53■■□□□ 1.2
VEGFA-211ENST00000476772 PRSS22Q9GZN4 317 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms