RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 K7EQG2 157 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 RGS10O43665 173 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 SCGNO76038 276 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 MT-CO2P00403 227 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 KRASP01116 189 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 RLN1P04808 185 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 CLEC2LP0C7M8 214 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 ZNF688P0C7X2 276 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 MYL9P24844 172 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 F2RP25116 425 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 G6PCP35575 357 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 FXYD4P59646 89 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 RCN1Q15293 331 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 OGFRL1Q5TC84 451 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 C1orf134Q5TEV5 83 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 TMEM17Q86X19 198 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 UBE2DNLQ8IWF7 75 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 ZNF114Q8NC26 417 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 DUSP18Q8NEJ0 188 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 BEST4Q8NFU0 473 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 DCANP1Q8TF63 244 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 FCAMRQ8WWV6 532 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 TMEM56Q96MV1 263 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 CCDC90BQ9GZT6 254 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 NDUFB11Q9NX14 153 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 RABAC1Q9UI14 185 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 PRNDQ9UKY0 176 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 PUS1Q9Y606 427 aaKnown RBP eCLIP3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 NACAE9PAV3 2078 aa3.66□□□□□ -1.82
SNRNP40-204ENST00000474025 HMCN2Q8NDA2 5059 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 A0A1B0GU03 582 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 TRDV1A0A1B0GX56 115 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 NOTOA8MTQ0 251 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 CASQ2O14958 399 aaPredicted RBP3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 GNG7O60262 68 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 SNAPC5O75971 98 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 IFNA21P01568 189 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 IFNA17P01571 189 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 NPY1RP25929 384 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 GNRHRP30968 328 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 RNF212Q495C1 297 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 ACTL10Q5JWF8 245 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 C22orf42Q6IC83 251 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 ZNF600Q6ZNG1 722 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 ZNF367Q7RTV3 350 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 PRSS48Q7RTY5 328 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 HOGA1Q86XE5 327 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 STXBP6Q8NFX7 210 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 LGALS14Q8TCE9 139 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 PINX1Q96BK5 328 aaKnown RBP3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 FAM210BQ96KR6 192 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 TMEM231Q9H6L2 316 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 SCRT2Q9NQ03 307 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 RHBDL2Q9NX52 303 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 FKBP11Q9NYL4 201 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 TPRKBQ9Y3C4 175 aa3.65□□□□□ -1.83
SNRNP40-204ENST00000474025 UBR4Q5T4S7 5183 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 A0A1W2PS18 150 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 HELTA6NFD8 242 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 PGLYRP1O75594 196 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 FCER2P06734 321 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 SPART-AS1P0CW21 52 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 NPPCP23582 126 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 CRYBB3P26998 211 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 FGF9P31371 208 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 LPAR6P43657 344 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 P2RY1P47900 373 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 NPBWR1P48145 328 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 HERV-K104P61576 105 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 PRCDQ00LT1 54 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 TBCEQ15813 527 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 KCTD21Q4G0X4 260 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 PSMG4Q5JS54 123 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 SFXN4Q6P4A7 337 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 ZNF705AQ6ZN79 300 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 TPRA1Q86W33 373 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 LYSMD2Q8IV50 215 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 OR5AP2Q8NGF4 316 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 BORCS5Q969J3 196 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 MOB3AQ96BX8 217 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 SLC25A38Q96DW6 304 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 METTL26Q96S19 204 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 RAB40CQ96S21 281 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 NEU1Q99519 415 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 TSC22D3Q99576 134 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 C1QTNF4Q9BXJ3 329 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 FXYD6Q9H0Q3 95 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 XCL2Q9UBD3 114 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 DKK2Q9UBU2 259 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 DAPK2Q9UIK4 370 aa3.64□□□□□ -1.83
SNRNP40-204ENST00000474025 TRAV18A0A075B6X5 111 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 TMEM189A5PLL7 270 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 MEIS3P1A6NDR6 274 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 ZNF705FA8MVS1 300 aaPredicted RBP3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 EPM2AB3EWF7 344 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 NPIPB6E9PJ23 425 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 H3BMM0 161 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 TMEM50AO95807 157 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 IGKV1-39P01597 117 aa3.63□□□□□ -1.83
SNRNP40-204ENST00000474025 IGKV1D-39P04432 117 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms