RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 A0A0D9SG52 128 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 OR4C46A6NHA9 309 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 F5H5K5 113 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 F5H768 121 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 PSCAO43653 123 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 ZNF737O75373 536 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 YIF1AO95070 293 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 OR5F1O95221 314 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 HBE1P02100 147 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 CD37P11049 281 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 GFAPP14136 432 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 RAB4AP20338 218 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 HMOX2P30519 316 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 SERPINB8P50452 374 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 DAD1P61803 113 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 CACNG7P62955 275 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 CDK5Q00535 292 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 WFDC2Q14508 124 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 GCSAMLQ5JQS6 135 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 OR10K2Q6IF99 312 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 FAHD1Q6P587 224 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 ZNF880Q6PDB4 577 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 H1FOOQ8IZA3 346 aaPredicted RBP2.12□□□□□ -2.07
VPS13A-210ENST00000471439 OR11H7Q8NGC8 314 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 OR52P1PQ8NH57 321 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 PPCDCQ96CD2 204 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 SPIN2AQ99865 258 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 RNF5Q99942 180 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 SPIN2BQ9BPZ2 258 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 ZNF251Q9BRH9 671 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 ANP32EQ9BTT0 268 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 SAMD10Q9BYL1 202 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 FGF23Q9GZV9 251 aaPredicted RBP2.12□□□□□ -2.07
VPS13A-210ENST00000471439 OR51I1Q9H343 314 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 CLN6Q9NWW5 311 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 ENPP5Q9UJA9 477 aa2.12□□□□□ -2.07
VPS13A-210ENST00000471439 BZW2Q9Y6E2 419 aaKnown RBP2.12□□□□□ -2.07
VPS13A-210ENST00000471439 C7orf66A4D0T2 115 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 TMEM189A5PLL7 270 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 PPP5D1E7EU14 171 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 NME4O00746 187 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 BPY2O14599 106 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 MRPS14O60783 128 aaKnown RBP2.11□□□□□ -2.07
VPS13A-210ENST00000471439 IGLV3-1P01715 115 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 C8orf88P0DMB2 117 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 NFYBP25208 207 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 RPL23P62829 140 aaKnown RBP2.11□□□□□ -2.07
VPS13A-210ENST00000471439 HBA1P69905 142 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 GNA13Q14344 377 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 C5orf64Q2M2E5 130 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 SMIM21Q3B7S5 101 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 GLYATL3Q5SZD4 288 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 SSX9Q7RTT3 188 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 CBR4Q8N4T8 237 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 OR5T1Q8NG75 326 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 SFXN5Q8TD22 340 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 CERS2Q96G23 380 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 OR10C1Q96KK4 312 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 SLIRPQ9GZT3 109 aaKnown RBP2.11□□□□□ -2.07
VPS13A-210ENST00000471439 GAL3ST2Q9H3Q3 398 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 AUNIPQ9H7T9 357 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 FAM206AQ9NX38 181 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 RASL12Q9NYN1 266 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 PCTPQ9UKL6 214 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 SLC22A13Q9Y226 551 aa2.11□□□□□ -2.07
VPS13A-210ENST00000471439 A0A1B0GWA3 101 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 GMNCA6NCL1 334 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 TMEM210A6NLX4 147 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 A8MWP6 167 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 KRBOX1C9JBD0 128 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 NDUFC2-KCTD14E9PQ53 114 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 H3BUA1 57 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 DBIP07108 87 aaKnown RBP2.1□□□□□ -2.07
VPS13A-210ENST00000471439 NEFHP12036 1026 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 MLNP12872 115 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 GNRHRP30968 328 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 OPRK1P41145 380 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 RBM34P42696 430 aaKnown RBP2.1□□□□□ -2.07
VPS13A-210ENST00000471439 MAGEA3P43357 314 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 GNG10P50151 68 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 MPV17L2Q567V2 206 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 FAM162BQ5T6X4 162 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 ZFP1Q6P2D0 407 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 TNFAIP8L2Q6P589 184 aaPredicted RBP2.1□□□□□ -2.07
VPS13A-210ENST00000471439 JAGN1Q8N5M9 183 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 AGR3Q8TD06 166 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 SLC35G5Q96KT7 338 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 RBP7Q96R05 134 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 HSD17B10Q99714 261 aaKnown RBP2.1□□□□□ -2.07
VPS13A-210ENST00000471439 RTL8AQ9BWD3 113 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 C8orf17Q9NRJ1 99 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 SLC7A11Q9UPY5 501 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 ANGPT4Q9Y264 503 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 RHBDD3Q9Y3P4 386 aa2.1□□□□□ -2.07
VPS13A-210ENST00000471439 SYCE1LA8MT33 242 aa2.09□□□□□ -2.07
VPS13A-210ENST00000471439 BET1O15155 118 aa2.09□□□□□ -2.07
VPS13A-210ENST00000471439 BANF1O75531 89 aa2.09□□□□□ -2.07
VPS13A-210ENST00000471439 HLA-DQA1P01909 254 aa2.09□□□□□ -2.07
VPS13A-210ENST00000471439 UBCP0CG48 685 aaKnown RBP2.09□□□□□ -2.07
VPS13A-210ENST00000471439 MAP2K4P45985 399 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms