RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 WFDC8Q8IUA0 241 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 C21orf140B9A014 251 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 FOLR3P41439 243 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 GABRA6Q16445 453 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 MLANAQ16655 118 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 SPINT2O43291 252 aa11.25□□□□□ -0.61
NPHP4-207ENST00000470763 C12orf54Q6X4T0 127 aa11.25□□□□□ -0.61
NPHP4-207ENST00000470763 SLC25A40Q8TBP6 338 aa11.25□□□□□ -0.61
NPHP4-207ENST00000470763 WIPF2Q8TF74 440 aaPredicted RBP11.25□□□□□ -0.61
NPHP4-207ENST00000470763 LEAP2Q969E1 77 aa11.25□□□□□ -0.61
NPHP4-207ENST00000470763 S1PR3Q99500 378 aa11.25□□□□□ -0.61
NPHP4-207ENST00000470763 COMMD5Q9GZQ3 224 aa11.25□□□□□ -0.61
NPHP4-207ENST00000470763 ENY2Q9NPA8 101 aa11.25□□□□□ -0.61
NPHP4-207ENST00000470763 MAP1BP46821 2468 aaKnown RBP11.25□□□□□ -0.61
NPHP4-207ENST00000470763 IGHV1-24A0A0C4DH33 117 aa11.25□□□□□ -0.61
NPHP4-207ENST00000470763 CYB561P49447 251 aa11.25□□□□□ -0.61
NPHP4-207ENST00000470763 RPS20P60866 119 aaKnown RBP11.25□□□□□ -0.61
NPHP4-207ENST00000470763 UTF1Q5T230 341 aa11.25□□□□□ -0.61
NPHP4-207ENST00000470763 SSX8Q7RTT4 187 aa11.25□□□□□ -0.61
NPHP4-207ENST00000470763 OR2V2Q96R30 315 aa11.25□□□□□ -0.61
NPHP4-207ENST00000470763 USP24Q9UPU5 2620 aa11.25□□□□□ -0.61
NPHP4-207ENST00000470763 HSBP1L1C9JCN9 74 aa11.24□□□□□ -0.61
NPHP4-207ENST00000470763 LEPROTL1O95214 131 aa11.24□□□□□ -0.61
NPHP4-207ENST00000470763 MBD6Q96DN6 1003 aa11.24□□□□□ -0.61
NPHP4-207ENST00000470763 SMPD2O60906 423 aa11.24□□□□□ -0.61
NPHP4-207ENST00000470763 ZNF134P52741 427 aa11.24□□□□□ -0.61
NPHP4-207ENST00000470763 UBE2L3P68036 154 aaKnown RBP11.24□□□□□ -0.61
NPHP4-207ENST00000470763 C1orf229Q6ZS94 237 aaPredicted RBP11.24□□□□□ -0.61
NPHP4-207ENST00000470763 TCF24Q7RTU0 167 aa11.24□□□□□ -0.61
NPHP4-207ENST00000470763 PIP4P1Q86T03 277 aa11.24□□□□□ -0.61
NPHP4-207ENST00000470763 DEFB124Q8NES8 71 aa11.24□□□□□ -0.61
NPHP4-207ENST00000470763 KMT2BQ9UMN6 2715 aaPredicted RBP11.24□□□□□ -0.61
NPHP4-207ENST00000470763 C15orf61A6NNL5 157 aa11.24□□□□□ -0.61
NPHP4-207ENST00000470763 CYC1P08574 325 aa11.24□□□□□ -0.61
NPHP4-207ENST00000470763 CD59P13987 128 aa11.24□□□□□ -0.61
NPHP4-207ENST00000470763 ZNF138P52744 262 aa11.24□□□□□ -0.61
NPHP4-207ENST00000470763 TBC1D28Q2M2D7 210 aa11.24□□□□□ -0.61
NPHP4-207ENST00000470763 OR9G1Q8NH87 305 aa11.24□□□□□ -0.61
NPHP4-207ENST00000470763 NAA38Q9BRA0 125 aaKnown RBP11.24□□□□□ -0.61
NPHP4-207ENST00000470763 PPIAL4DF5H284 164 aa11.23□□□□□ -0.61
NPHP4-207ENST00000470763 PYYP10082 97 aa11.23□□□□□ -0.61
NPHP4-207ENST00000470763 MPV17P39210 176 aa11.23□□□□□ -0.61
NPHP4-207ENST00000470763 MAGEA5P43359 124 aa11.23□□□□□ -0.61
NPHP4-207ENST00000470763 FAM71F2Q6NXP2 309 aa11.23□□□□□ -0.61
NPHP4-207ENST00000470763 ACP7Q6ZNF0 438 aa11.23□□□□□ -0.61
NPHP4-207ENST00000470763 SMIM12Q96EX1 92 aa11.23□□□□□ -0.61
NPHP4-207ENST00000470763 HEATR1Q9H583 2144 aaKnown RBP11.23□□□□□ -0.61
NPHP4-207ENST00000470763 TRGV8A0A0C4DH27 118 aa11.23□□□□□ -0.61
NPHP4-207ENST00000470763 FAM90A9PA6NNJ1 464 aa11.23□□□□□ -0.61
NPHP4-207ENST00000470763 C15orf65H3BRN8 121 aa11.23□□□□□ -0.61
NPHP4-207ENST00000470763 UQCRFS1P47985 274 aa11.23□□□□□ -0.61
NPHP4-207ENST00000470763 PLGLB1Q02325 96 aa11.23□□□□□ -0.61
NPHP4-207ENST00000470763 GRAMD2BQ96HH9 432 aa11.23□□□□□ -0.61
NPHP4-207ENST00000470763 SCRT2Q9NQ03 307 aa11.23□□□□□ -0.61
NPHP4-207ENST00000470763 AMMECR1Q9Y4X0 333 aaPredicted RBP11.23□□□□□ -0.61
NPHP4-207ENST00000470763 IGF2RP11717 2491 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 C7orf71A4D174 169 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 CD5LO43866 347 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 OR2J3O76001 311 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 ZNF137PP52743 207 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 TAS2R45P59539 299 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 RASL11AQ6T310 242 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 C11orf53Q8IXP5 236 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 TMEM191AQ9H0A3 160 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 FNDC4Q9H6D8 234 aaPredicted RBP11.22□□□□□ -0.61
NPHP4-207ENST00000470763 FZR1Q9UM11 496 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 CRXO43186 299 aaPredicted RBP11.22□□□□□ -0.61
NPHP4-207ENST00000470763 HES3Q5TGS1 186 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 PEF1Q9UBV8 284 aaKnown RBP11.22□□□□□ -0.61
NPHP4-207ENST00000470763 APOA2P02652 100 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 IGLC1P0CG04 106 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 C8orf88P0DMB2 117 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 HSPE1P61604 102 aaKnown RBP11.22□□□□□ -0.61
NPHP4-207ENST00000470763 GNG5P63218 68 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 IL11RAQ14626 422 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 SLC25A33Q9BSK2 321 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 BOKQ9UMX3 212 aaPredicted RBP11.22□□□□□ -0.61
NPHP4-207ENST00000470763 ZNF835Q9Y2P0 537 aa11.22□□□□□ -0.61
NPHP4-207ENST00000470763 GAGE10A6NGK3 116 aa11.21□□□□□ -0.61
NPHP4-207ENST00000470763 ADH4P08319 380 aa11.21□□□□□ -0.61
NPHP4-207ENST00000470763 PPP1R32Q7Z5V6 425 aa11.21□□□□□ -0.61
NPHP4-207ENST00000470763 CHRDL1Q9BU40 450 aa11.21□□□□□ -0.61
NPHP4-207ENST00000470763 KLF13Q9Y2Y9 288 aaPredicted RBP11.21□□□□□ -0.61
NPHP4-207ENST00000470763 FAM231BA6NCW3 169 aa11.21□□□□□ -0.62
NPHP4-207ENST00000470763 C1orf185Q5T7R7 199 aa11.21□□□□□ -0.62
NPHP4-207ENST00000470763 SVILO95425 2214 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 GPR183P32249 361 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 HIST1H1AQ02539 215 aaPredicted RBP11.2□□□□□ -0.62
NPHP4-207ENST00000470763 WDR82Q6UXN9 313 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 IDI2-AS1Q9NZ38 188 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 SPAARA0A1B0GVQ0 90 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 TCTAP57738 103 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 LINC00696Q6ZRV3 163 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 CD177Q8N6Q3 437 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 FER1L6-AS1Q8NA97 138 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 OR1B1Q8NGR6 318 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 DUSP23Q9BVJ7 150 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 SLC25A2Q9BXI2 301 aa11.2□□□□□ -0.62
NPHP4-207ENST00000470763 IFI27L2Q9H2X8 130 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms