RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 ZNF32P17041 273 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 IL1RNP18510 177 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 ELK1P19419 428 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 RPS4Y1P22090 263 aaKnown RBP3.05□□□□□ -1.92
SCFD1-205ENST00000469043 OPRK1P41145 380 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 RPS10P46783 165 aaKnown RBP3.05□□□□□ -1.92
SCFD1-205ENST00000469043 TAS2R45P59539 299 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 RPL13AP3Q6NVV1 102 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 WDR86Q86TI4 376 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 GPHB5Q86YW7 130 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 OR11G2Q8NGC1 345 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 OR9A2Q8NGT5 310 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 DNAJC9Q8WXX5 260 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 SLC25A46Q96AG3 418 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 SPIN2AQ99865 258 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 SPIN2BQ9BPZ2 258 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 SEC22CQ9BRL7 303 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 FAM60AQ9NP50 221 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 ZNF355PQ9NSJ1 428 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 CELA1Q9UNI1 258 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 FANCMQ8IYD8 2048 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 AKAP11Q9UKA4 1901 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 ECM29Q5VYK3 1845 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 ARAP2Q8WZ64 1704 aa3.05□□□□□ -1.92
SCFD1-205ENST00000469043 TNS1Q9HBL0 1735 aaKnown RBP3.05□□□□□ -1.92
SCFD1-205ENST00000469043 PTPRJQ12913 1337 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 IGLV3-10A0A075B6K4 115 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 A0A087WX48 190 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 J3KT08 172 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 J3QRK9 145 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 PLA2G10O15496 165 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 BCL2L11O43521 198 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 NRASP01111 189 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 HRASP01112 189 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 KRASP01116 189 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 IGLV1-47P01700 117 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 ATP6V0CP27449 155 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 BLVRBP30043 206 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-205ENST00000469043 PIGPP57054 158 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 TBPL1P62380 186 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 ZNF616Q08AN1 781 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 DHRS2Q13268 280 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 ENDOGQ14249 297 aaKnown RBP3.04□□□□□ -1.92
SCFD1-205ENST00000469043 OR8B8Q15620 311 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 NDUFA5Q16718 116 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 FAM104BQ5XKR9 115 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 ANGPTL5Q86XS5 388 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 H1FOOQ8IZA3 346 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-205ENST00000469043 ZNF101Q8IZC7 436 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 PACRGLQ8N7B6 248 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 TOMM6Q96B49 74 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 DOHHQ9BU89 302 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 NKX6-2Q9C056 277 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-205ENST00000469043 TMEM126AQ9H061 195 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 TPT1P8Q9HAU6 139 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 ZNF586Q9NXT0 402 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 COPZ2Q9P299 210 aa3.04□□□□□ -1.92
SCFD1-205ENST00000469043 AMMECR1Q9Y4X0 333 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-205ENST00000469043 MYO5AQ9Y4I1 1855 aaKnown RBP3.03□□□□□ -1.92
SCFD1-205ENST00000469043 EP400Q96L91 3159 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 TMEM269A0A1B0GVZ9 245 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 LEUTXA8MZ59 168 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 C9JCJ5 164 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 FAM107AO95990 144 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 SRP19P09132 144 aaKnown RBP3.03□□□□□ -1.92
SCFD1-205ENST00000469043 CGB3P0DN86 165 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 CGB7P0DN87 165 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 RPL7P18124 248 aaKnown RBP3.03□□□□□ -1.92
SCFD1-205ENST00000469043 NPY1RP25929 384 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 RAB13P51153 203 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 RPS28P62857 69 aaKnown RBP3.03□□□□□ -1.92
SCFD1-205ENST00000469043 PSG7Q13046 419 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 HTR4Q13639 388 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 AGTRAPQ6RW13 159 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 Q6ZR54 194 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 TMEM86AQ8N2M4 240 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 DAND5Q8N907 189 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 NUP35Q8NFH5 326 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 RNASE6Q93091 150 aaKnown RBP3.03□□□□□ -1.92
SCFD1-205ENST00000469043 ZNF799Q96GE5 643 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 VPS25Q9BRG1 176 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 C1QTNF6Q9BXI9 259 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 GABARAPL1Q9H0R8 117 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 OR2D2Q9H210 308 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 PHLDA3Q9Y5J5 127 aa3.03□□□□□ -1.92
SCFD1-205ENST00000469043 CDK5RAP2Q96SN8 1893 aa3.03□□□□□ -1.93
SCFD1-205ENST00000469043 DOCK2Q92608 1830 aa3.03□□□□□ -1.93
SCFD1-205ENST00000469043 KIAA1551Q9HCM1 1747 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 LRP5O75197 1615 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 TRAV36DV7A0A075B6V5 113 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 BORCS7-ASMTA0A0B4J1R7 106 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 A0A1B0GX51 115 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 DUXBA0A1W2PPF3 345 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 TMEM189A5PLL7 270 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 LINC00587B1AMM8 73 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 IGLL5B9A064 214 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 I3L521 148 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 SULT1C4O75897 302 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 IGHV1-46P01743 117 aa3.02□□□□□ -1.93
SCFD1-205ENST00000469043 APOC1P02654 83 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms