RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 CDK2AP2O75956 126 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 CRYZL1O95825 349 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 HRASP01112 189 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 IGKV1-39P01597 117 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 RLN2P04090 185 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 IGKV1D-39P04432 117 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 PSMB6P28072 239 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 SMCPP49901 116 aaPredicted RBP10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 APOC4P55056 127 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 S100A10P60903 97 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 LRRC37A5PQ49AS3 106 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 ZNF562Q6V9R5 426 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 H2BFWTQ7Z2G1 175 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 DMBX1Q8NFW5 382 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 OR5AN1Q8NGI8 311 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 OR1S1Q8NH92 325 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 OSR1Q8TAX0 266 aaPredicted RBP10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 CACFD1Q9UGQ2 172 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 APLNQ9ULZ1 77 aa10.92□□□□□ -0.66
HMGXB4-206ENST00000466438 FXYD6-FXYD2A0A087WZ82 144 aa10.91□□□□□ -0.66
HMGXB4-206ENST00000466438 H0YJW9 148 aa10.91□□□□□ -0.66
HMGXB4-206ENST00000466438 UBE2CO00762 179 aa10.91□□□□□ -0.66
HMGXB4-206ENST00000466438 MPC2O95563 127 aa10.91□□□□□ -0.66
HMGXB4-206ENST00000466438 SCGB1D2O95969 90 aa10.91□□□□□ -0.66
HMGXB4-206ENST00000466438 KRASP01116 189 aa10.91□□□□□ -0.66
HMGXB4-206ENST00000466438 G6PCP35575 357 aa10.91□□□□□ -0.66
HMGXB4-206ENST00000466438 COA4Q9NYJ1 87 aa10.91□□□□□ -0.66
HMGXB4-206ENST00000466438 TECRQ9NZ01 308 aaKnown RBP10.91□□□□□ -0.66
HMGXB4-206ENST00000466438 FBXL17Q9UF56 701 aa10.91□□□□□ -0.66
HMGXB4-206ENST00000466438 FBXL7Q9UJT9 491 aa10.91□□□□□ -0.66
HMGXB4-206ENST00000466438 DMBT1Q9UGM3 2413 aaPredicted RBP10.91□□□□□ -0.66
HMGXB4-206ENST00000466438 WRBO00258 174 aa10.9□□□□□ -0.66
HMGXB4-206ENST00000466438 ST8SIA3O43173 380 aa10.9□□□□□ -0.66
HMGXB4-206ENST00000466438 IGKV1-5P01602 117 aa10.9□□□□□ -0.66
HMGXB4-206ENST00000466438 SLC25A4P12235 298 aa10.9□□□□□ -0.66
HMGXB4-206ENST00000466438 PVALBP20472 110 aaPredicted RBP10.9□□□□□ -0.66
HMGXB4-206ENST00000466438 C4BPBP20851 252 aa10.9□□□□□ -0.66
HMGXB4-206ENST00000466438 NKX2-1P43699 371 aaPredicted RBP10.9□□□□□ -0.66
HMGXB4-206ENST00000466438 BRWD1-AS2P59051 145 aa10.9□□□□□ -0.66
HMGXB4-206ENST00000466438 NANOS2P60321 138 aaKnown RBP10.9□□□□□ -0.66
HMGXB4-206ENST00000466438 OR4D5Q8NGN0 318 aa10.9□□□□□ -0.66
HMGXB4-206ENST00000466438 GPR146Q96CH1 333 aa10.9□□□□□ -0.66
HMGXB4-206ENST00000466438 HARBI1Q96MB7 349 aa10.9□□□□□ -0.66
HMGXB4-206ENST00000466438 CACNG5Q9UF02 275 aa10.9□□□□□ -0.66
HMGXB4-206ENST00000466438 HMSDA8MTL9 139 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 FAM90A26D6RGX4 464 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 SHOXO15266 292 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 CA2P00918 260 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 NUP62P37198 522 aaPredicted RBP10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 LINC00205P59089 165 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 DEFA5Q01523 94 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 IL15RAQ13261 267 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 RAB32Q13637 225 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 POU2AF1Q16633 256 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 TMEM177Q53S58 311 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 PRSS54Q6PEW0 395 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 Q8N1X5 172 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 OR5T1Q8NG75 326 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 VSTM2AQ8TAG5 236 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 C11orf45Q8TAV5 145 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 CLCC1Q96S66 551 aa10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 LSM5Q9Y4Y9 91 aaKnown RBP10.89□□□□□ -0.67
HMGXB4-206ENST00000466438 TRAV14DV4A0A0A6YYC5 116 aa10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 A0A0G2JRQ6 117 aa10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 G3V3Q6 166 aa10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 RBMXL2O75526 392 aaKnown RBP10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 MED6O75586 246 aa10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 FOLR2P14207 255 aa10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 CTRB1P17538 263 aa10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 NKX2-5P52952 324 aaPredicted RBP10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 CTRB2Q6GPI1 263 aa10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 INO80EQ8NBZ0 244 aaPredicted RBP10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 OR4A16Q8NH70 328 aa10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 GRPEL2Q8TAA5 225 aa10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 USMG5Q96IX5 58 aa10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 TMEM140Q9NV12 185 aa10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 MBD2Q9UBB5 411 aa10.88□□□□□ -0.67
HMGXB4-206ENST00000466438 C2orf70A6NJV1 201 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 IGLL5B9A064 214 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 E5RGE8 158 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 K7EPK0 472 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 BMPR1BO00238 502 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 ARPC5O15511 151 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 PITX3O75364 302 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 MBPP02686 304 aaPredicted RBP10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 IGKV1-16P04430 117 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 P0C879 139 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 LGALS7P47929 136 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 RPS16P62249 146 aaKnown RBP10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 VMA21Q3ZAQ7 101 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 Q5BKY6 102 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 SSX9Q7RTT3 188 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 ZNF546Q86UE3 836 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 TMEM61Q8N0U2 210 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 OR4A5Q8NH83 315 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 RNF5Q99942 180 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 METTL1Q9UBP6 276 aaKnown RBP10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 NSG2Q9Y328 171 aa10.87□□□□□ -0.67
HMGXB4-206ENST00000466438 KIR2DL5BA0A0G2JN68 375 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms