RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 CA2P00918 260 aa13.37□□□□□ -0.27
EXOSC3-203ENST00000465229 PPT1P50897 306 aa13.37□□□□□ -0.27
EXOSC3-203ENST00000465229 RPL8P62917 257 aaKnown RBP13.37□□□□□ -0.27
EXOSC3-203ENST00000465229 SSBP2P81877 361 aaPredicted RBP13.37□□□□□ -0.27
EXOSC3-203ENST00000465229 ZNF506Q5JVG8 444 aa13.37□□□□□ -0.27
EXOSC3-203ENST00000465229 Q6ZS46 218 aa13.37□□□□□ -0.27
EXOSC3-203ENST00000465229 SLC24A4Q8NFF2 622 aa13.37□□□□□ -0.27
EXOSC3-203ENST00000465229 TMEM170AQ8WVE7 144 aa13.37□□□□□ -0.27
EXOSC3-203ENST00000465229 RCC1LQ96I51 464 aaKnown RBP13.37□□□□□ -0.27
EXOSC3-203ENST00000465229 ATRQ13535 2644 aa13.37□□□□□ -0.27
EXOSC3-203ENST00000465229 DNASE2O00115 360 aaPredicted RBP13.36□□□□□ -0.27
EXOSC3-203ENST00000465229 MYOD1P15172 320 aa13.36□□□□□ -0.27
EXOSC3-203ENST00000465229 NPY1RP25929 384 aa13.36□□□□□ -0.27
EXOSC3-203ENST00000465229 CX3CL1P78423 397 aa13.36□□□□□ -0.27
EXOSC3-203ENST00000465229 ZNF726P1Q15940 193 aa13.36□□□□□ -0.27
EXOSC3-203ENST00000465229 KHDC3LQ587J8 217 aa13.36□□□□□ -0.27
EXOSC3-203ENST00000465229 ZNF562Q6V9R5 426 aa13.36□□□□□ -0.27
EXOSC3-203ENST00000465229 MMD2Q8IY49 270 aa13.36□□□□□ -0.27
EXOSC3-203ENST00000465229 HSPB9Q9BQS6 159 aa13.36□□□□□ -0.27
EXOSC3-203ENST00000465229 VSIRQ9H7M9 311 aa13.36□□□□□ -0.27
EXOSC3-203ENST00000465229 PLEKHA3Q9HB20 300 aa13.36□□□□□ -0.27
EXOSC3-203ENST00000465229 IGHV7-81A0A0B4J1V7 117 aa13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 TEX50A0A1B0GTY4 177 aa13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 HSPB1P04792 205 aaKnown RBP13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 OR10G4Q8NGN3 311 aa13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 NPFFR1Q9GZQ6 430 aa13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 LINC01548A6NM66 108 aa13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 IFNA4P05014 189 aa13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 MAS1LP35410 378 aa13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 GNB1P62873 340 aa13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 SRSF2Q01130 221 aaKnown RBP13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 BSXQ3C1V8 233 aa13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 C10orf55Q5SWW7 151 aa13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 ACSM6Q6P461 480 aa13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 RPP25LQ8N5L8 163 aaKnown RBP13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 TMA7Q9Y2S6 64 aaKnown RBP13.35□□□□□ -0.27
EXOSC3-203ENST00000465229 CTXND1A0A1B0GTU2 59 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 A0A1B0GV50 99 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 E7EUB6 86 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 NDUFS6O75380 124 aaKnown RBP13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 ACTL6BO94805 426 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 CNIH1O95406 144 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 OPN1MWP04001 364 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 OPN1MW2P0DN77 364 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 OPN1MW3P0DN78 364 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 COMPP49747 757 aaPredicted RBP13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 NDPQ00604 133 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 ICAM4Q14773 271 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 FXYD3Q14802 87 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 TNXAQ16473 311 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 C2orf83Q53S99 150 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 C9orf152Q5JTZ5 239 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 FFAR4Q5NUL3 377 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 TREML4Q6UXN2 200 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 CLRN3Q8NCR9 226 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 OR1L8Q8NGR8 309 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 RARRES2Q99969 163 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 NPVFQ9HCQ7 196 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 NDUFA4L2Q9NRX3 87 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 KCNIP2Q9NS61 270 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 SLC39A9Q9NUM3 307 aa13.34□□□□□ -0.27
EXOSC3-203ENST00000465229 LOC102723971A0A1B0GUV8 181 aa13.33□□□□□ -0.28
EXOSC3-203ENST00000465229 MAP1LC3B2A6NCE7 125 aa13.33□□□□□ -0.28
EXOSC3-203ENST00000465229 IGHG2P01859 326 aa13.33□□□□□ -0.28
EXOSC3-203ENST00000465229 OPRK1P41145 380 aa13.33□□□□□ -0.28
EXOSC3-203ENST00000465229 ELLP55199 621 aaPredicted RBP13.33□□□□□ -0.28
EXOSC3-203ENST00000465229 RPL15P61313 204 aaKnown RBP13.33□□□□□ -0.28
EXOSC3-203ENST00000465229 ACOT6Q3I5F7 207 aaPredicted RBP13.33□□□□□ -0.28
EXOSC3-203ENST00000465229 ACTR3CQ9C0K3 210 aaPredicted RBP13.33□□□□□ -0.28
EXOSC3-203ENST00000465229 PRSS22Q9GZN4 317 aa13.33□□□□□ -0.28
EXOSC3-203ENST00000465229 COMMD5Q9GZQ3 224 aa13.33□□□□□ -0.28
EXOSC3-203ENST00000465229 MAP1LC3BQ9GZQ8 125 aa13.33□□□□□ -0.28
EXOSC3-203ENST00000465229 ZNF702PQ9H963 129 aa13.33□□□□□ -0.28
EXOSC3-203ENST00000465229 LSM4Q9Y4Z0 139 aaKnown RBP13.33□□□□□ -0.28
EXOSC3-203ENST00000465229 A0A1W2PN81 502 aa13.32□□□□□ -0.28
EXOSC3-203ENST00000465229 CGB1A6NKQ9 187 aa13.32□□□□□ -0.28
EXOSC3-203ENST00000465229 SRP19P09132 144 aaKnown RBP13.32□□□□□ -0.28
EXOSC3-203ENST00000465229 EGR2P11161 476 aaPredicted RBP13.32□□□□□ -0.28
EXOSC3-203ENST00000465229 CHRNA7P36544 502 aa13.32□□□□□ -0.28
EXOSC3-203ENST00000465229 TAGLN2P37802 199 aaKnown RBP13.32□□□□□ -0.28
EXOSC3-203ENST00000465229 NPBWR1P48145 328 aa13.32□□□□□ -0.28
EXOSC3-203ENST00000465229 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.32□□□□□ -0.28
EXOSC3-203ENST00000465229 OR10G9Q8NGN4 311 aa13.32□□□□□ -0.28
EXOSC3-203ENST00000465229 OR10G7Q8NGN6 311 aa13.32□□□□□ -0.28
EXOSC3-203ENST00000465229 FAM74A7A6NL05 159 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 SEC14L6B5MCN3 397 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 CYB5BO43169 146 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 IFNA1P01562 189 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 CRYBA1P05813 215 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 BCL2P10415 239 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 HAGHQ16775 308 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 FAM74A3Q4VXF1 159 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 SOHLH1Q5JUK2 328 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 LCN15Q6UWW0 184 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 Q6ZSV7 163 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 SSX7Q7RTT5 188 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 Q8N2B8 174 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 SRSF12Q8WXF0 261 aaKnown RBP13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 ARPC1AQ92747 370 aa13.31□□□□□ -0.28
EXOSC3-203ENST00000465229 FAM103A1Q9BTL3 118 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms