RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 MRGPRFQ96AM1 343 aa12.47□□□□□ -0.41
HMGN1-209ENST00000463631 DYNC1H1Q14204 4646 aaKnown RBP12.47□□□□□ -0.41
HMGN1-209ENST00000463631 CORTO00230 105 aa12.46□□□□□ -0.41
HMGN1-209ENST00000463631 RTL8CO15255 209 aa12.46□□□□□ -0.41
HMGN1-209ENST00000463631 P2RY1P47900 373 aa12.46□□□□□ -0.41
HMGN1-209ENST00000463631 TAS2R20P59543 309 aa12.46□□□□□ -0.41
HMGN1-209ENST00000463631 LYSMD2Q8IV50 215 aa12.46□□□□□ -0.41
HMGN1-209ENST00000463631 METTL26Q96S19 204 aa12.46□□□□□ -0.41
HMGN1-209ENST00000463631 YTHDF1Q9BYJ9 559 aaKnown RBP12.46□□□□□ -0.41
HMGN1-209ENST00000463631 CELA1Q9UNI1 258 aa12.46□□□□□ -0.41
HMGN1-209ENST00000463631 PRSS29PA6NIE9 313 aa12.45□□□□□ -0.42
HMGN1-209ENST00000463631 ZNF688P0C7X2 276 aa12.45□□□□□ -0.42
HMGN1-209ENST00000463631 PRSS3P35030 304 aa12.45□□□□□ -0.42
HMGN1-209ENST00000463631 SNCAP37840 140 aa12.45□□□□□ -0.42
HMGN1-209ENST00000463631 UCP3P55916 312 aa12.45□□□□□ -0.42
HMGN1-209ENST00000463631 DEFB131BA0A096LNP1 70 aa12.44□□□□□ -0.42
HMGN1-209ENST00000463631 KNCNA6PVL3 124 aa12.44□□□□□ -0.42
HMGN1-209ENST00000463631 CLN5O75503 358 aa12.44□□□□□ -0.42
HMGN1-209ENST00000463631 P0C879 139 aa12.44□□□□□ -0.42
HMGN1-209ENST00000463631 C12orf74Q32Q52 190 aa12.44□□□□□ -0.42
HMGN1-209ENST00000463631 SAMD12Q8N8I0 201 aa12.44□□□□□ -0.42
HMGN1-209ENST00000463631 NDUFAF3Q9BU61 184 aa12.44□□□□□ -0.42
HMGN1-209ENST00000463631 SCGB2A1O75556 95 aa12.43□□□□□ -0.42
HMGN1-209ENST00000463631 RNASE2P10153 161 aaKnown RBP12.43□□□□□ -0.42
HMGN1-209ENST00000463631 HLA-DMAP28067 261 aa12.43□□□□□ -0.42
HMGN1-209ENST00000463631 TSPAN5P62079 268 aa12.43□□□□□ -0.42
HMGN1-209ENST00000463631 LGALS9BQ3B8N2 356 aa12.43□□□□□ -0.42
HMGN1-209ENST00000463631 SPINK9Q5DT21 86 aa12.43□□□□□ -0.42
HMGN1-209ENST00000463631 ACTL10Q5JWF8 245 aa12.43□□□□□ -0.42
HMGN1-209ENST00000463631 SLC35G3Q8N808 338 aa12.43□□□□□ -0.42
HMGN1-209ENST00000463631 OR4X1Q8NH49 305 aa12.43□□□□□ -0.42
HMGN1-209ENST00000463631 GPX8Q8TED1 209 aa12.43□□□□□ -0.42
HMGN1-209ENST00000463631 NARS2Q96I59 477 aaKnown RBP12.43□□□□□ -0.42
HMGN1-209ENST00000463631 CLEC5AQ9NY25 188 aa12.43□□□□□ -0.42
HMGN1-209ENST00000463631 ABCA13Q86UQ4 5058 aa12.43□□□□□ -0.42
HMGN1-209ENST00000463631 HELTA6NFD8 242 aa12.42□□□□□ -0.42
HMGN1-209ENST00000463631 IGKV1-17P01599 117 aa12.42□□□□□ -0.42
HMGN1-209ENST00000463631 IGKV1-5P01602 117 aa12.42□□□□□ -0.42
HMGN1-209ENST00000463631 RPL5P46777 297 aaKnown RBP12.42□□□□□ -0.42
HMGN1-209ENST00000463631 EIF2B2P49770 351 aaKnown RBP12.42□□□□□ -0.42
HMGN1-209ENST00000463631 SUB1P53999 127 aaKnown RBP eCLIP12.42□□□□□ -0.42
HMGN1-209ENST00000463631 C1QTNF4Q9BXJ3 329 aa12.42□□□□□ -0.42
HMGN1-209ENST00000463631 FNDC4Q9H6D8 234 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-209ENST00000463631 MRPL36Q9P0J6 103 aaKnown RBP12.42□□□□□ -0.42
HMGN1-209ENST00000463631 U3KQE9 123 aa12.42□□□□□ -0.42
HMGN1-209ENST00000463631 A0A0B4J293 547 aa12.41□□□□□ -0.42
HMGN1-209ENST00000463631 PPP5CP53041 499 aa12.41□□□□□ -0.42
HMGN1-209ENST00000463631 IZUMO4Q1ZYL8 232 aa12.41□□□□□ -0.42
HMGN1-209ENST00000463631 BSXQ3C1V8 233 aa12.41□□□□□ -0.42
HMGN1-209ENST00000463631 SCPEP1Q9HB40 452 aa12.41□□□□□ -0.42
HMGN1-209ENST00000463631 CD74P04233 296 aa12.4□□□□□ -0.42
HMGN1-209ENST00000463631 OPRK1P41145 380 aa12.4□□□□□ -0.42
HMGN1-209ENST00000463631 RND3P61587 244 aa12.4□□□□□ -0.42
HMGN1-209ENST00000463631 NUTF2P61970 127 aaKnown RBP12.4□□□□□ -0.42
HMGN1-209ENST00000463631 GLMPQ8WWB7 406 aa12.4□□□□□ -0.42
HMGN1-209ENST00000463631 ZNF486Q96H40 463 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-209ENST00000463631 RAB40CQ96S21 281 aa12.4□□□□□ -0.42
HMGN1-209ENST00000463631 SCRT1Q9BWW7 348 aa12.4□□□□□ -0.42
HMGN1-209ENST00000463631 SEPSECSQ9HD40 501 aaKnown RBP12.4□□□□□ -0.42
HMGN1-209ENST00000463631 TRAV30A0A087WSZ9 112 aa12.39□□□□□ -0.43
HMGN1-209ENST00000463631 IFNA17P01571 189 aa12.39□□□□□ -0.43
HMGN1-209ENST00000463631 NPY1RP25929 384 aa12.39□□□□□ -0.43
HMGN1-209ENST00000463631 RCVRNP35243 200 aa12.39□□□□□ -0.43
HMGN1-209ENST00000463631 AKR1C2P52895 323 aa12.39□□□□□ -0.43
HMGN1-209ENST00000463631 AP2S1P53680 142 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-209ENST00000463631 DHRS2Q13268 280 aa12.39□□□□□ -0.43
HMGN1-209ENST00000463631 NEDD8Q15843 81 aa12.39□□□□□ -0.43
HMGN1-209ENST00000463631 PSMG4Q5JS54 123 aa12.39□□□□□ -0.43
HMGN1-209ENST00000463631 Q6ZR54 194 aa12.39□□□□□ -0.43
HMGN1-209ENST00000463631 ZNF767PQ75MW2 155 aa12.39□□□□□ -0.43
HMGN1-209ENST00000463631 TMEM230Q96A57 120 aa12.39□□□□□ -0.43
HMGN1-209ENST00000463631 PDCD10Q9BUL8 212 aa12.39□□□□□ -0.43
HMGN1-209ENST00000463631 Q9H521 79 aa12.39□□□□□ -0.43
HMGN1-209ENST00000463631 ATG12O94817 140 aa12.38□□□□□ -0.43
HMGN1-209ENST00000463631 TGFBR1P36897 503 aa12.38□□□□□ -0.43
HMGN1-209ENST00000463631 RPS19P39019 145 aaKnown RBP12.38□□□□□ -0.43
HMGN1-209ENST00000463631 HOXA1P49639 335 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-209ENST00000463631 C16orf54Q6UWD8 224 aa12.38□□□□□ -0.43
HMGN1-209ENST00000463631 FAM210BQ96KR6 192 aa12.38□□□□□ -0.43
HMGN1-209ENST00000463631 NEU1Q99519 415 aa12.38□□□□□ -0.43
HMGN1-209ENST00000463631 FAM90A26D6RGX4 464 aa12.37□□□□□ -0.43
HMGN1-209ENST00000463631 M0R2N4 97 aa12.37□□□□□ -0.43
HMGN1-209ENST00000463631 IGLC1P0CG04 106 aa12.37□□□□□ -0.43
HMGN1-209ENST00000463631 ETV6P41212 452 aa12.37□□□□□ -0.43
HMGN1-209ENST00000463631 SNRPD3P62318 126 aaKnown RBP12.37□□□□□ -0.43
HMGN1-209ENST00000463631 TIGITQ495A1 244 aa12.37□□□□□ -0.43
HMGN1-209ENST00000463631 AARDQ4LEZ3 155 aa12.37□□□□□ -0.43
HMGN1-209ENST00000463631 ZNF705AQ6ZN79 300 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-209ENST00000463631 TP53RKQ96S44 253 aa12.37□□□□□ -0.43
HMGN1-209ENST00000463631 TMEM189A5PLL7 270 aa12.36□□□□□ -0.43
HMGN1-209ENST00000463631 ZNF705FA8MVS1 300 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-209ENST00000463631 H3BMM0 161 aa12.36□□□□□ -0.43
HMGN1-209ENST00000463631 APOA1P02647 267 aa12.36□□□□□ -0.43
HMGN1-209ENST00000463631 HNRNPCP07910 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
HMGN1-209ENST00000463631 ZNF705DP0CH99 300 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-209ENST00000463631 ZNF705BP0CI00 300 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-209ENST00000463631 PIGPP57054 158 aa12.36□□□□□ -0.43
HMGN1-209ENST00000463631 YPEL3P61236 119 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-209ENST00000463631 LHFPL1Q86WI0 220 aa12.36□□□□□ -0.43
HMGN1-209ENST00000463631 OR1S2Q8NGQ3 325 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms