RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 RGS21Q2M5E4 152 aa15.18■□□□□ 0.02
COL9A3-204ENST00000463487 GPHB5Q86YW7 130 aa15.18■□□□□ 0.02
COL9A3-204ENST00000463487 OR9G4Q8NGQ1 327 aa15.18■□□□□ 0.02
COL9A3-204ENST00000463487 OR10C1Q96KK4 312 aa15.18■□□□□ 0.02
COL9A3-204ENST00000463487 LGALS9O00182 355 aa15.17■□□□□ 0.02
COL9A3-204ENST00000463487 SAP30O75446 220 aa15.17■□□□□ 0.02
COL9A3-204ENST00000463487 OR2C1O95371 312 aa15.17■□□□□ 0.02
COL9A3-204ENST00000463487 C2orf50Q96LR7 162 aa15.17■□□□□ 0.02
COL9A3-204ENST00000463487 RAB40CQ96S21 281 aa15.17■□□□□ 0.02
COL9A3-204ENST00000463487 PAIP2BQ9ULR5 123 aaKnown RBP15.17■□□□□ 0.02
COL9A3-204ENST00000463487 SSNA1O43805 119 aa15.16■□□□□ 0.02
COL9A3-204ENST00000463487 SSSCA1O60232 199 aa15.16■□□□□ 0.02
COL9A3-204ENST00000463487 POLR2GP62487 172 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL9A3-204ENST00000463487 ZC4H2Q9NQZ6 224 aa15.16■□□□□ 0.02
COL9A3-204ENST00000463487 STRAPQ9Y3F4 350 aaKnown RBP15.16■□□□□ 0.02
COL9A3-204ENST00000463487 TRAV30A0A087WSZ9 112 aa15.15■□□□□ 0.02
COL9A3-204ENST00000463487 ZNF320A2RRD8 509 aa15.15■□□□□ 0.02
COL9A3-204ENST00000463487 REC114Q7Z4M0 266 aa15.15■□□□□ 0.02
COL9A3-204ENST00000463487 OR4X1Q8NH49 305 aa15.15■□□□□ 0.02
COL9A3-204ENST00000463487 PKD1L1Q8TDX9 2849 aa15.15■□□□□ 0.02
COL9A3-204ENST00000463487 NOTCH3Q9UM47 2321 aa15.14■□□□□ 0.01
COL9A3-204ENST00000463487 L7N2F9 121 aa15.14■□□□□ 0.01
COL9A3-204ENST00000463487 GOSR2O14653 212 aa15.14■□□□□ 0.01
COL9A3-204ENST00000463487 WIPF1O43516 503 aa15.14■□□□□ 0.01
COL9A3-204ENST00000463487 IGHV3-48P01763 117 aa15.14■□□□□ 0.01
COL9A3-204ENST00000463487 SPNP16150 400 aa15.14■□□□□ 0.01
COL9A3-204ENST00000463487 PVALBP20472 110 aaPredicted RBP15.14■□□□□ 0.01
COL9A3-204ENST00000463487 VAMP2P63027 116 aa15.14■□□□□ 0.01
COL9A3-204ENST00000463487 CYCSP99999 105 aaKnown RBP15.14■□□□□ 0.01
COL9A3-204ENST00000463487 SPANXN5Q5MJ07 72 aa15.14■□□□□ 0.01
COL9A3-204ENST00000463487 PSENENQ9NZ42 101 aa15.14■□□□□ 0.01
COL9A3-204ENST00000463487 UFC1Q9Y3C8 167 aa15.14■□□□□ 0.01
COL9A3-204ENST00000463487 F8W735 103 aaPredicted RBP15.13■□□□□ 0.01
COL9A3-204ENST00000463487 NDUFA4O00483 81 aa15.13■□□□□ 0.01
COL9A3-204ENST00000463487 CLN5O75503 358 aa15.13■□□□□ 0.01
COL9A3-204ENST00000463487 TAS2R30P59541 319 aa15.13■□□□□ 0.01
COL9A3-204ENST00000463487 BEAN1Q3B7T3 259 aa15.13■□□□□ 0.01
COL9A3-204ENST00000463487 KPRPQ5T749 579 aaPredicted RBP15.13■□□□□ 0.01
COL9A3-204ENST00000463487 C11orf87Q6NUJ2 197 aa15.13■□□□□ 0.01
COL9A3-204ENST00000463487 CACNG8Q8WXS5 425 aa15.13■□□□□ 0.01
COL9A3-204ENST00000463487 SLC35E1Q96K37 410 aa15.13■□□□□ 0.01
COL9A3-204ENST00000463487 SMIM8Q96KF7 97 aa15.13■□□□□ 0.01
COL9A3-204ENST00000463487 ZNF436Q9C0F3 470 aaPredicted RBP15.13■□□□□ 0.01
COL9A3-204ENST00000463487 FNDC4Q9H6D8 234 aaPredicted RBP15.13■□□□□ 0.01
COL9A3-204ENST00000463487 C7orf66A4D0T2 115 aa15.12■□□□□ 0.01
COL9A3-204ENST00000463487 C15orf62A8K5M9 175 aa15.12■□□□□ 0.01
COL9A3-204ENST00000463487 A8MWP6 167 aa15.12■□□□□ 0.01
COL9A3-204ENST00000463487 MBPP02686 304 aaPredicted RBP15.12■□□□□ 0.01
COL9A3-204ENST00000463487 CTSGP08311 255 aa15.12■□□□□ 0.01
COL9A3-204ENST00000463487 GPX4P36969 197 aaPredicted RBP15.12■□□□□ 0.01
COL9A3-204ENST00000463487 CD69Q07108 199 aa15.12■□□□□ 0.01
COL9A3-204ENST00000463487 SLC16A13Q7RTY0 426 aa15.12■□□□□ 0.01
COL9A3-204ENST00000463487 TMEM116Q8NCL8 245 aa15.12■□□□□ 0.01
COL9A3-204ENST00000463487 TMEM170AQ8WVE7 144 aa15.12■□□□□ 0.01
COL9A3-204ENST00000463487 CHRDL1Q9BU40 450 aa15.12■□□□□ 0.01
COL9A3-204ENST00000463487 SIGLEC8Q9NYZ4 499 aa15.12■□□□□ 0.01
COL9A3-204ENST00000463487 IGHV3-35A0A0C4DH35 117 aa15.11■□□□□ 0.01
COL9A3-204ENST00000463487 H3BP45 60 aa15.11■□□□□ 0.01
COL9A3-204ENST00000463487 TSC22D2O75157 780 aa15.11■□□□□ 0.01
COL9A3-204ENST00000463487 SCAF4O95104 1147 aaKnown RBP15.11■□□□□ 0.01
COL9A3-204ENST00000463487 RND2P52198 227 aa15.11■□□□□ 0.01
COL9A3-204ENST00000463487 ELLP55199 621 aaPredicted RBP15.11■□□□□ 0.01
COL9A3-204ENST00000463487 S100A10P60903 97 aa15.11■□□□□ 0.01
COL9A3-204ENST00000463487 DYNLRB2Q8TF09 96 aa15.11■□□□□ 0.01
COL9A3-204ENST00000463487 MARC2Q969Z3 335 aa15.11■□□□□ 0.01
COL9A3-204ENST00000463487 LSM5Q9Y4Y9 91 aaKnown RBP15.11■□□□□ 0.01
COL9A3-204ENST00000463487 YIF1AO95070 293 aa15.1■□□□□ 0.01
COL9A3-204ENST00000463487 TMEM50AO95807 157 aa15.1■□□□□ 0.01
COL9A3-204ENST00000463487 ADMP35318 185 aa15.1■□□□□ 0.01
COL9A3-204ENST00000463487 EGFEM1PQ0D2K5 195 aa15.1■□□□□ 0.01
COL9A3-204ENST00000463487 PRSS54Q6PEW0 395 aa15.1■□□□□ 0.01
COL9A3-204ENST00000463487 ZNF600Q6ZNG1 722 aa15.1■□□□□ 0.01
COL9A3-204ENST00000463487 OR1S2Q8NGQ3 325 aa15.1■□□□□ 0.01
COL9A3-204ENST00000463487 TMEM190Q8WZ59 177 aa15.1■□□□□ 0.01
COL9A3-204ENST00000463487 ACY3Q96HD9 319 aa15.1■□□□□ 0.01
COL9A3-204ENST00000463487 NMES1Q9C002 83 aa15.1■□□□□ 0.01
COL9A3-204ENST00000463487 DAZ1Q9NQZ3 744 aaKnown RBP15.1■□□□□ 0.01
COL9A3-204ENST00000463487 RCL1Q9Y2P8 373 aaKnown RBP15.1■□□□□ 0.01
COL9A3-204ENST00000463487 C2orf70A6NJV1 201 aa15.09■□□□□ 0.01
COL9A3-204ENST00000463487 RLN2P04090 185 aa15.09■□□□□ 0.01
COL9A3-204ENST00000463487 CSN3P07498 182 aa15.09■□□□□ 0.01
COL9A3-204ENST00000463487 MLANAQ16655 118 aa15.09■□□□□ 0.01
COL9A3-204ENST00000463487 GINS3Q9BRX5 216 aa15.09■□□□□ 0.01
COL9A3-204ENST00000463487 C20orf24Q9BUV8 137 aa15.09■□□□□ 0.01
COL9A3-204ENST00000463487 MGAT4CQ9UBM8 478 aa15.09■□□□□ 0.01
COL9A3-204ENST00000463487 ALG5Q9Y673 324 aa15.09■□□□□ 0.01
COL9A3-204ENST00000463487 K7EPK0 472 aa15.08■□□□□ 0
COL9A3-204ENST00000463487 FABP1P07148 127 aa15.08■□□□□ 0
COL9A3-204ENST00000463487 OR10J1P30954 320 aa15.08■□□□□ 0
COL9A3-204ENST00000463487 OR2K2Q8NGT1 345 aa15.08■□□□□ 0
COL9A3-204ENST00000463487 NPIPB3Q92617 1050 aa15.08■□□□□ 0
COL9A3-204ENST00000463487 PET100P0DJ07 73 aa15.07■□□□□ 0
COL9A3-204ENST00000463487 FOLR2P14207 255 aa15.07■□□□□ 0
COL9A3-204ENST00000463487 BMI1P35226 326 aa15.07■□□□□ 0
COL9A3-204ENST00000463487 BCAP31P51572 246 aa15.07■□□□□ 0
COL9A3-204ENST00000463487 LCN12Q6JVE5 192 aa15.07■□□□□ 0
COL9A3-204ENST00000463487 UNQ9165/PRO28630Q6UXU0 137 aa15.07■□□□□ 0
COL9A3-204ENST00000463487 IL34Q6ZMJ4 242 aa15.07■□□□□ 0
COL9A3-204ENST00000463487 OR10P1Q8NGE3 313 aa15.07■□□□□ 0
COL9A3-204ENST00000463487 TECRQ9NZ01 308 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms