RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 C2orf83Q53S99 150 aa11.29□□□□□ -0.6
ATG4B-213ENST00000460211 RBPMS2Q6ZRY4 209 aaKnown RBP11.29□□□□□ -0.6
ATG4B-213ENST00000460211 Q8N1Y9 231 aa11.29□□□□□ -0.6
ATG4B-213ENST00000460211 SLC24A4Q8NFF2 622 aa11.29□□□□□ -0.6
ATG4B-213ENST00000460211 CACNG8Q8WXS5 425 aa11.29□□□□□ -0.6
ATG4B-213ENST00000460211 TUBA4BQ9H853 241 aa11.29□□□□□ -0.6
ATG4B-213ENST00000460211 TMED3Q9Y3Q3 217 aa11.29□□□□□ -0.6
ATG4B-213ENST00000460211 TRAV25A0A0B4J276 109 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 NXPH3O95157 252 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 IFNA10P01566 189 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 IGHV4-30-4P0DP06 118 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 SLC25A6P12236 298 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 TNFRSF9Q07011 255 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 BSXQ3C1V8 233 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 ANKRD55Q3KP44 614 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 LAMTOR1Q6IAA8 161 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 ETFRF1Q6IPR1 90 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 BTNL8Q6UX41 500 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 RNASEH2CQ8TDP1 164 aaKnown RBP11.28□□□□□ -0.6
ATG4B-213ENST00000460211 S100ZQ8WXG8 99 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 ASCL2Q99929 193 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 CCDC32Q9BV29 185 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 HSPB7Q9UBY9 170 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 U3KQ87 197 aa11.28□□□□□ -0.6
ATG4B-213ENST00000460211 DYNC2H1Q8NCM8 4307 aaKnown RBP11.27□□□□□ -0.61
ATG4B-213ENST00000460211 TRAV30A0A087WSZ9 112 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 A6NHS1 94 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 ZNF785A8K8V0 405 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 MED6O75586 246 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 TMEM50AO95807 157 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 FRMD6-AS1P0C7T7 363 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 EDN2P20800 178 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 NPY1RP25929 384 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 BMI1P35226 326 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 ATP5IP56385 69 aaPredicted RBP11.27□□□□□ -0.61
ATG4B-213ENST00000460211 CD81P60033 236 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 SLC16A13Q7RTY0 426 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 OR4X1Q8NH49 305 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 COQ8AQ8NI60 647 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 DTD1Q8TEA8 209 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 WDR89Q96FK6 387 aaPredicted RBP11.27□□□□□ -0.61
ATG4B-213ENST00000460211 NEURL2Q9BR09 285 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 GINS3Q9BRX5 216 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 MLXQ9UH92 298 aa11.27□□□□□ -0.61
ATG4B-213ENST00000460211 C9orf170A2RU37 121 aa11.26□□□□□ -0.61
ATG4B-213ENST00000460211 A8MZ25 164 aa11.26□□□□□ -0.61
ATG4B-213ENST00000460211 CLN5O75503 358 aa11.26□□□□□ -0.61
ATG4B-213ENST00000460211 IFNA21P01568 189 aa11.26□□□□□ -0.61
ATG4B-213ENST00000460211 HOXB5P09067 269 aa11.26□□□□□ -0.61
ATG4B-213ENST00000460211 OR4E1P0C645 316 aa11.26□□□□□ -0.61
ATG4B-213ENST00000460211 SLC25A4P12235 298 aa11.26□□□□□ -0.61
ATG4B-213ENST00000460211 C4orf46Q504U0 113 aa11.26□□□□□ -0.61
ATG4B-213ENST00000460211 ZNF600Q6ZNG1 722 aa11.26□□□□□ -0.61
ATG4B-213ENST00000460211 TMEM61Q8N0U2 210 aa11.26□□□□□ -0.61
ATG4B-213ENST00000460211 RBKSQ9H477 322 aa11.26□□□□□ -0.61
ATG4B-213ENST00000460211 IGHV3OR16-8A0A075B7F1 116 aa11.25□□□□□ -0.61
ATG4B-213ENST00000460211 TRAV14DV4A0A0A6YYC5 116 aa11.25□□□□□ -0.61
ATG4B-213ENST00000460211 FAM90A26D6RGX4 464 aa11.25□□□□□ -0.61
ATG4B-213ENST00000460211 LYRM1O43325 122 aa11.25□□□□□ -0.61
ATG4B-213ENST00000460211 ZNF207O43670 478 aaKnown RBP11.25□□□□□ -0.61
ATG4B-213ENST00000460211 SCAF4O95104 1147 aaKnown RBP11.25□□□□□ -0.61
ATG4B-213ENST00000460211 OR52B4Q8NGK2 314 aa11.25□□□□□ -0.61
ATG4B-213ENST00000460211 FNDC4Q9H6D8 234 aaPredicted RBP11.25□□□□□ -0.61
ATG4B-213ENST00000460211 ZMAT4Q9H898 229 aa11.25□□□□□ -0.61
ATG4B-213ENST00000460211 BATF3Q9NR55 127 aa11.25□□□□□ -0.61
ATG4B-213ENST00000460211 C19orf73Q9NVV2 129 aa11.25□□□□□ -0.61
ATG4B-213ENST00000460211 FLVCR2Q9UPI3 526 aa11.25□□□□□ -0.61
ATG4B-213ENST00000460211 C3orf84H3BNL1 204 aa11.24□□□□□ -0.61
ATG4B-213ENST00000460211 PLA2G10O15496 165 aa11.24□□□□□ -0.61
ATG4B-213ENST00000460211 PITX3O75364 302 aa11.24□□□□□ -0.61
ATG4B-213ENST00000460211 IFNA4P05014 189 aa11.24□□□□□ -0.61
ATG4B-213ENST00000460211 RPP30P78346 268 aaKnown RBP11.24□□□□□ -0.61
ATG4B-213ENST00000460211 DHRS2Q13268 280 aa11.24□□□□□ -0.61
ATG4B-213ENST00000460211 MLANAQ16655 118 aa11.24□□□□□ -0.61
ATG4B-213ENST00000460211 GGNBP1Q5YKI7 109 aa11.24□□□□□ -0.61
ATG4B-213ENST00000460211 LYG2Q86SG7 212 aa11.24□□□□□ -0.61
ATG4B-213ENST00000460211 SBSPONQ8IVN8 264 aa11.24□□□□□ -0.61
ATG4B-213ENST00000460211 TMEM116Q8NCL8 245 aa11.24□□□□□ -0.61
ATG4B-213ENST00000460211 OR10C1Q96KK4 312 aa11.24□□□□□ -0.61
ATG4B-213ENST00000460211 CIB3Q96Q77 187 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-213ENST00000460211 SPAG8Q99932 426 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-213ENST00000460211 PTTG2Q9NZH5 202 aa11.24□□□□□ -0.61
ATG4B-213ENST00000460211 SMPXQ9UHP9 88 aa11.24□□□□□ -0.61
ATG4B-213ENST00000460211 RYR2Q92736 4967 aa11.23□□□□□ -0.61
ATG4B-213ENST00000460211 IGHV7-4-1A0A0J9YVY3 117 aa11.23□□□□□ -0.61
ATG4B-213ENST00000460211 OR11H12B2RN74 326 aa11.23□□□□□ -0.61
ATG4B-213ENST00000460211 CD5P06127 495 aa11.23□□□□□ -0.61
ATG4B-213ENST00000460211 CD7P09564 240 aa11.23□□□□□ -0.61
ATG4B-213ENST00000460211 ANXA7P20073 488 aaKnown RBP11.23□□□□□ -0.61
ATG4B-213ENST00000460211 BTCP35070 178 aa11.23□□□□□ -0.61
ATG4B-213ENST00000460211 RAB11AP62491 216 aa11.23□□□□□ -0.61
ATG4B-213ENST00000460211 TOMM20LQ6UXN7 152 aa11.23□□□□□ -0.61
ATG4B-213ENST00000460211 RHPN1-AS1Q9BWJ2 59 aa11.23□□□□□ -0.61
ATG4B-213ENST00000460211 WDR12Q9GZL7 423 aaKnown RBP11.23□□□□□ -0.61
ATG4B-213ENST00000460211 PUS1Q9Y606 427 aaKnown RBP eCLIP11.23□□□□□ -0.61
ATG4B-213ENST00000460211 SELENOKQ9Y6D0 94 aa11.23□□□□□ -0.61
ATG4B-213ENST00000460211 TENM2Q9NT68 2774 aa11.23□□□□□ -0.61
ATG4B-213ENST00000460211 STAB2Q8WWQ8 2551 aa11.23□□□□□ -0.61
ATG4B-213ENST00000460211 TSPAN4O14817 238 aa11.22□□□□□ -0.61
ATG4B-213ENST00000460211 RND2P52198 227 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms