RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 OR1L6Q8NGR2 347 aa10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 OR2T6Q8NHC8 308 aa10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 H1FXQ92522 213 aaKnown RBP10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 MBD6Q96DN6 1003 aa10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 WFIKKN1Q96NZ8 548 aa10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 VKORC1Q9BQB6 163 aa10.08□□□□□ -0.8
ECHDC1-209ENST00000454591 KIR2DL5BA0A0G2JN68 375 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 KIR2DL5BA0A0G2JPC4 375 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 IGLC7A0M8Q6 106 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 CORTO00230 105 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 COX7A2P2O60397 106 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 RD3LP0DJH9 198 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 CRISP2P16562 243 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 CASP6P55212 293 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 TPPP2P59282 170 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 RBPJQ06330 500 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 FBXL19-AS1Q494R0 122 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 C10orf113Q5VZT2 155 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 KIR2DL5AQ8N109 375 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 TMEM116Q8NCL8 245 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 OR5AU1Q8NGC0 362 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 C8orf46Q8TAG6 207 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 WIPF2Q8TF74 440 aaPredicted RBP10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 CCL17Q92583 94 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 RNF5Q99942 180 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 C2orf88Q9BSF0 95 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 TTC28Q96AY4 2481 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 CELSR3Q9NYQ7 3312 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 IGHV1-69-2A0A0G2JMI3 117 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 A0A1W2PPI3 338 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 CBLN1P23435 193 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 UBE2L3P68036 154 aaKnown RBP10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 DIAPH2-AS1Q14236 149 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 TBR1Q16650 682 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 OR10J3Q5JRS4 329 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 C1orf194Q5T5A4 169 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 MORN5Q5VZ52 161 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 TMEM136Q6ZRR5 245 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 CMTM2Q8TAZ6 248 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 NPIPB3Q92617 1050 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 FXYD5Q96DB9 178 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 SRSF8Q9BRL6 282 aaKnown RBP10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 CHRDL1Q9BU40 450 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 PAXXQ9BUH6 204 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 DYNLRB1Q9NP97 96 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 ZNF355PQ9NSJ1 428 aa10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 AMMECR1Q9Y4X0 333 aaPredicted RBP10.07□□□□□ -0.8
ECHDC1-209ENST00000454591 IZUMO1RA6ND01 250 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 K7ENP7 123 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 NUPR1O60356 82 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 HLA-DQA1P01909 254 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 HNF1AP20823 631 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 COL8A2P25067 703 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 REG1BP48304 166 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 PRRX1P54821 245 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 OR5I1Q13606 314 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 MRPL52Q86TS9 123 aaKnown RBP10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 ZNF329Q86UD4 541 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 OR8I2Q8N0Y5 310 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 MS4A10Q96PG2 267 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 PRO1933Q9H354 126 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 NAGKQ9UJ70 344 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 KLF12Q9Y4X4 402 aa10.06□□□□□ -0.8
ECHDC1-209ENST00000454591 SNURFLB1AK76 121 aa10.05□□□□□ -0.8
ECHDC1-209ENST00000454591 FCN1O00602 326 aa10.05□□□□□ -0.8
ECHDC1-209ENST00000454591 SLC25A17O43808 307 aa10.05□□□□□ -0.8
ECHDC1-209ENST00000454591 AMY1AP04745 511 aa10.05□□□□□ -0.8
ECHDC1-209ENST00000454591 REG1AP05451 166 aa10.05□□□□□ -0.8
ECHDC1-209ENST00000454591 RPL27AP46776 148 aaKnown RBP10.05□□□□□ -0.8
ECHDC1-209ENST00000454591 SSBP2P81877 361 aaPredicted RBP10.05□□□□□ -0.8
ECHDC1-209ENST00000454591 C10orf55Q5SWW7 151 aa10.05□□□□□ -0.8
ECHDC1-209ENST00000454591 IBA57Q5T440 356 aaKnown RBP10.05□□□□□ -0.8
ECHDC1-209ENST00000454591 ZNF841Q6ZN19 808 aa10.05□□□□□ -0.8
ECHDC1-209ENST00000454591 ST6GALNAC3Q8NDV1 305 aa10.05□□□□□ -0.8
ECHDC1-209ENST00000454591 PERPQ96FX8 193 aa10.05□□□□□ -0.8
ECHDC1-209ENST00000454591 C7orf69Q9H7B7 122 aa10.05□□□□□ -0.8
ECHDC1-209ENST00000454591 RALYQ9UKM9 306 aaKnown RBP10.05□□□□□ -0.8
ECHDC1-209ENST00000454591 EP300Q09472 2414 aaPredicted RBP10.04□□□□□ -0.8
ECHDC1-209ENST00000454591 ARFGEF3Q5TH69 2177 aa10.04□□□□□ -0.8
ECHDC1-209ENST00000454591 IGHV2-26A0A0B4J1V2 119 aa10.04□□□□□ -0.8
ECHDC1-209ENST00000454591 TRAV5A0A0B4J249 113 aa10.04□□□□□ -0.8
ECHDC1-209ENST00000454591 PEX7O00628 323 aa10.04□□□□□ -0.8
ECHDC1-209ENST00000454591 CD3EP07766 207 aa10.04□□□□□ -0.8
ECHDC1-209ENST00000454591 IER3P46695 156 aa10.04□□□□□ -0.8
ECHDC1-209ENST00000454591 TMEM183BQ1AE95 376 aa10.04□□□□□ -0.8
ECHDC1-209ENST00000454591 TEX43Q6ZNM6 134 aa10.04□□□□□ -0.8
ECHDC1-209ENST00000454591 SPACA3Q8IXA5 215 aa10.04□□□□□ -0.8
ECHDC1-209ENST00000454591 SIGLEC9Q9Y336 463 aa10.04□□□□□ -0.8
ECHDC1-209ENST00000454591 ZGRF1Q86YA3 2104 aa10.04□□□□□ -0.8
ECHDC1-209ENST00000454591 ZNF705GA8MUZ8 300 aaPredicted RBP10.03□□□□□ -0.8
ECHDC1-209ENST00000454591 C22orf46C9J442 243 aa10.03□□□□□ -0.8
ECHDC1-209ENST00000454591 SERF1AO75920 110 aa10.03□□□□□ -0.8
ECHDC1-209ENST00000454591 UNQ6494/PRO21346Q6UXR6 183 aa10.03□□□□□ -0.8
ECHDC1-209ENST00000454591 C22orf15Q8WYQ4 148 aa10.03□□□□□ -0.8
ECHDC1-209ENST00000454591 CLEC7AQ9BXN2 247 aa10.03□□□□□ -0.8
ECHDC1-209ENST00000454591 RNASE7Q9H1E1 156 aaKnown RBP10.03□□□□□ -0.8
ECHDC1-209ENST00000454591 TPSG1Q9NRR2 321 aa10.03□□□□□ -0.8
ECHDC1-209ENST00000454591 MRPL36Q9P0J6 103 aaKnown RBP10.03□□□□□ -0.8
ECHDC1-209ENST00000454591 POLR3KQ9Y2Y1 108 aaPredicted RBP10.03□□□□□ -0.8
ECHDC1-209ENST00000454591 CNOT1A5YKK6 2376 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms