RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 TMEM126AQ9H061 195 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 GLIPR2Q9H4G4 154 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 PRORYQ9H606 182 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 NHP2Q9NX24 153 aaKnown RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 IL36BQ9NZH7 164 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 ARFGEF3Q5TH69 2177 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 TRBV5-7A0A0A0MS05 114 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 A0A0J9YY10 115 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 CTXND1A0A1B0GTU2 59 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 A0A1B0GX78 115 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 A0A1W2PNU3 283 aaPredicted RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 TMEM262E9PQX1 116 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 H3BMG7 143 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 H3BVH4 76 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 PRRG2O14669 202 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 CHST1O43916 411 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 OR9G9P0C7N8 305 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 IAPPP10997 89 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 COX5AP20674 150 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 EVI2AP22794 236 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 FCGR2BP31994 310 aaPredicted RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 CAMPP49913 170 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 SERF2P84101 59 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 TIGITQ495A1 244 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 MRPL2Q5T653 305 aaKnown RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 ZNF474Q6S9Z5 364 aaPredicted RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 FAM159AQ6UWV7 190 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 HSD11B1LQ7Z5J1 315 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 SPATA12Q7Z6I5 190 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 OR10G7Q8NGN6 311 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 ZNF721Q8TF20 911 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 TMEM171Q8WVE6 324 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 FAM131CQ96AQ9 280 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 RNF125Q96EQ8 232 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 PRELID3AQ96N28 172 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 OXGR1Q96P68 337 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 LYRM4Q9HD34 91 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 GCM1Q9NP62 436 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 TP53TG3Q9ULZ0 132 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 EMC9Q9Y3B6 208 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 PTPRSQ13332 1948 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 TRAV36DV7A0A075B6V5 113 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 A0A0J9YW62 118 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 CRYM-AS1A6NIL9 109 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 CD300LBA8K4G0 201 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 INAFM1C9JVW0 142 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 H0YJW9 148 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 J3KT08 172 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 DHHO43323 396 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 WNT2P09544 360 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 PSG2P11465 335 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 AREGP15514 252 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 POLR2LP62875 67 aaKnown RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 IL15RAQ13261 267 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 IL11RAQ14626 422 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 SGCBQ16585 318 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 SPANXN5Q5MJ07 72 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 WIPI1Q5MNZ9 446 aaPredicted RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 SPINK14Q6IE38 97 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 H1FNTQ75WM6 255 aaPredicted RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 C6orf201Q7Z4U5 140 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 Q8N976 141 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 ZNF740Q8NDX6 193 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 VSTM2LQ96N03 204 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 AMELYQ99218 206 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 MCRIP2Q9BUT9 160 aaKnown RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 VSIRQ9H7M9 311 aa2.33□□□□□ -2.04
LIG4-203ENST00000442234 SPANXB1Q9NS25 103 aaPredicted RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 YTHDF2Q9Y5A9 579 aaKnown RBP2.33□□□□□ -2.04
LIG4-203ENST00000442234 SCN3AQ9NY46 2000 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 TRAV9-1A0A075B6T8 112 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 TMSB15BA0A087X1C1 80 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 TRAV24A0A0B4J272 114 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 KIR2DS1A0A191URI9 304 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 LRRC30A6NM36 301 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 FOXI3A8MTJ6 420 aaPredicted RBP2.32□□□□□ -2.04
LIG4-203ENST00000442234 UPK3AO75631 287 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 GHRHP01286 108 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 IGHV3-7P01780 117 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 AMY1AP04745 511 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 RPS4XP62701 263 aaKnown RBP2.32□□□□□ -2.04
LIG4-203ENST00000442234 Q0VFX4 171 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 KIR2DS1Q14954 304 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 PDCD1Q15116 288 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 C9orf153Q5TBE3 101 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 C1orf140Q5VVS0 124 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 FAM166AQ6J272 317 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 AMTNQ6UX39 209 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 DOK3Q7L591 496 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 TMEM178AQ8NBL3 297 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 C18orf32Q8TCD1 76 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 ZNF501Q96CX3 271 aaPredicted RBP2.32□□□□□ -2.04
LIG4-203ENST00000442234 HSD17B10Q99714 261 aaKnown RBP2.32□□□□□ -2.04
LIG4-203ENST00000442234 GNB1LQ9BYB4 327 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 TRAV8-2A0A0B4J237 113 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 IGHV5-51A0A0C4DH38 117 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 LOC107984156A0A0G2JMH3 177 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 A0A1B0GWA3 101 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 C11orf98E9PRG8 122 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms