RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 CD177Q8N6Q3 437 aa16.58■□□□□ 0.24
SHOX2-203ENST00000441443 SNRNP40Q96DI7 357 aaKnown RBP16.58■□□□□ 0.24
SHOX2-203ENST00000441443 PIEZO2Q9H5I5 2752 aa16.58■□□□□ 0.24
SHOX2-203ENST00000441443 MRPL49Q13405 166 aaKnown RBP16.58■□□□□ 0.24
SHOX2-203ENST00000441443 MCRIP2Q9BUT9 160 aaKnown RBP16.58■□□□□ 0.24
SHOX2-203ENST00000441443 TRGV5A0A0B4J1U4 118 aa16.57■□□□□ 0.24
SHOX2-203ENST00000441443 CORTO00230 105 aa16.57■□□□□ 0.24
SHOX2-203ENST00000441443 NKX2-8O15522 239 aa16.57■□□□□ 0.24
SHOX2-203ENST00000441443 FOXA3P55318 350 aaPredicted RBP16.57■□□□□ 0.24
SHOX2-203ENST00000441443 RHOGP84095 191 aa16.57■□□□□ 0.24
SHOX2-203ENST00000441443 GABRA6Q16445 453 aa16.57■□□□□ 0.24
SHOX2-203ENST00000441443 ZC2HC1AQ96GY0 325 aa16.57■□□□□ 0.24
SHOX2-203ENST00000441443 URB1-AS1Q96HZ7 61 aa16.57■□□□□ 0.24
SHOX2-203ENST00000441443 SPRR3Q9UBC9 169 aa16.57■□□□□ 0.24
SHOX2-203ENST00000441443 LYZL6O75951 148 aa16.57■□□□□ 0.24
SHOX2-203ENST00000441443 HSPE1P61604 102 aaKnown RBP16.57■□□□□ 0.24
SHOX2-203ENST00000441443 PLA2G2CQ5R387 149 aa16.57■□□□□ 0.24
SHOX2-203ENST00000441443 COL27A1Q8IZC6 1860 aaPredicted RBP16.57■□□□□ 0.24
SHOX2-203ENST00000441443 NUDT10Q8NFP7 164 aa16.56■□□□□ 0.24
SHOX2-203ENST00000441443 OR9G1Q8NH87 305 aa16.56■□□□□ 0.24
SHOX2-203ENST00000441443 NUDT11Q96G61 164 aa16.56■□□□□ 0.24
SHOX2-203ENST00000441443 COMMD5Q9GZQ3 224 aa16.56■□□□□ 0.24
SHOX2-203ENST00000441443 HEATR1Q9H583 2144 aaKnown RBP16.56■□□□□ 0.24
SHOX2-203ENST00000441443 SPENQ96T58 3664 aaKnown RBP16.56■□□□□ 0.24
SHOX2-203ENST00000441443 BVES-AS1Q5T3Y7 98 aa16.56■□□□□ 0.24
SHOX2-203ENST00000441443 WIPF2Q8TF74 440 aaPredicted RBP16.56■□□□□ 0.24
SHOX2-203ENST00000441443 SGK494Q96LW2 274 aa16.56■□□□□ 0.24
SHOX2-203ENST00000441443 IFI27L2Q9H2X8 130 aa16.56■□□□□ 0.24
SHOX2-203ENST00000441443 HIGD1CA8MV81 97 aa16.56■□□□□ 0.24
SHOX2-203ENST00000441443 VWC2LB2RUY7 222 aa16.56■□□□□ 0.24
SHOX2-203ENST00000441443 KLF5Q13887 457 aaPredicted RBP16.56■□□□□ 0.24
SHOX2-203ENST00000441443 CNEP1R1Q8N9A8 125 aa16.56■□□□□ 0.24
SHOX2-203ENST00000441443 DUSP13Q9UII6 198 aa16.56■□□□□ 0.24
SHOX2-203ENST00000441443 SPAARA0A1B0GVQ0 90 aa16.55■□□□□ 0.24
SHOX2-203ENST00000441443 SMIM15Q7Z3B0 74 aa16.55■□□□□ 0.24
SHOX2-203ENST00000441443 CORO2AQ92828 525 aa16.55■□□□□ 0.24
SHOX2-203ENST00000441443 PCNX1Q96RV3 2341 aa16.55■□□□□ 0.24
SHOX2-203ENST00000441443 INTS1Q8N201 2190 aaKnown RBP16.55■□□□□ 0.24
SHOX2-203ENST00000441443 UBE2L3P68036 154 aaKnown RBP16.55■□□□□ 0.24
SHOX2-203ENST00000441443 VHLLQ6RSH7 139 aa16.55■□□□□ 0.24
SHOX2-203ENST00000441443 PRR7Q8TB68 274 aa16.55■□□□□ 0.24
SHOX2-203ENST00000441443 MBD6Q96DN6 1003 aa16.55■□□□□ 0.24
SHOX2-203ENST00000441443 A0A1W2PRE2 83 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 H0Y8G0 127 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 TAS2R45P59539 299 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 ZNF841Q6ZN19 808 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 FAM90A1Q86YD7 464 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 MDS2Q8NDY4 140 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 OR2V2Q96R30 315 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 ACACAQ13085 2346 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 FAM120AOSQ5T036 256 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 OR4S2Q8NH73 311 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 TMEM14BQ9NUH8 114 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.54■□□□□ 0.24
SHOX2-203ENST00000441443 C8orf88P0DMB2 117 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 PYYP10082 97 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 SMIM21Q3B7S5 101 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 DEFB124Q8NES8 71 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 SLC25A33Q9BSK2 321 aa16.54■□□□□ 0.24
SHOX2-203ENST00000441443 AMMECR1Q9Y4X0 333 aaPredicted RBP16.54■□□□□ 0.24
SHOX2-203ENST00000441443 PRDX2P32119 198 aa16.53■□□□□ 0.24
SHOX2-203ENST00000441443 FABP6P51161 128 aa16.53■□□□□ 0.24
SHOX2-203ENST00000441443 IDI2-AS1Q9NZ38 188 aa16.53■□□□□ 0.24
SHOX2-203ENST00000441443 OR51B2Q9Y5P1 312 aa16.53■□□□□ 0.24
SHOX2-203ENST00000441443 GRAMD2BQ96HH9 432 aa16.53■□□□□ 0.24
SHOX2-203ENST00000441443 CXXC4Q9H2H0 198 aa16.53■□□□□ 0.24
SHOX2-203ENST00000441443 SELENOKQ9Y6D0 94 aa16.53■□□□□ 0.24
SHOX2-203ENST00000441443 SLC25A34Q6PIV7 304 aa16.52■□□□□ 0.24
SHOX2-203ENST00000441443 RASL11AQ6T310 242 aa16.52■□□□□ 0.24
SHOX2-203ENST00000441443 DEFB125Q8N687 156 aa16.52■□□□□ 0.24
SHOX2-203ENST00000441443 LRRC29Q8WV35 223 aa16.52■□□□□ 0.24
SHOX2-203ENST00000441443 DDB2Q92466 427 aa16.52■□□□□ 0.24
SHOX2-203ENST00000441443 ST20Q9HBF5 79 aa16.52■□□□□ 0.24
SHOX2-203ENST00000441443 FOXA2Q9Y261 457 aaPredicted RBP16.52■□□□□ 0.24
SHOX2-203ENST00000441443 SYS1-DBNDD2H3BUS1 97 aa16.52■□□□□ 0.23
SHOX2-203ENST00000441443 AGFG2O95081 481 aa16.52■□□□□ 0.23
SHOX2-203ENST00000441443 LOXL3P58215 753 aa16.52■□□□□ 0.23
SHOX2-203ENST00000441443 TCF24Q7RTU0 167 aa16.52■□□□□ 0.23
SHOX2-203ENST00000441443 JPT1Q9UK76 154 aa16.52■□□□□ 0.23
SHOX2-203ENST00000441443 J3QR06 171 aa16.51■□□□□ 0.23
SHOX2-203ENST00000441443 TIMM8AO60220 97 aaPredicted RBP16.51■□□□□ 0.23
SHOX2-203ENST00000441443 PSG9Q00887 426 aa16.51■□□□□ 0.23
SHOX2-203ENST00000441443 TIMM8BQ9Y5J9 83 aaPredicted RBP16.51■□□□□ 0.23
SHOX2-203ENST00000441443 IGHV3OR15-7A0A075B7D8 119 aa16.51■□□□□ 0.23
SHOX2-203ENST00000441443 A0A087X0K7 114 aa16.51■□□□□ 0.23
SHOX2-203ENST00000441443 ZNRF1Q8ND25 227 aa16.51■□□□□ 0.23
SHOX2-203ENST00000441443 PMCHL2Q9BQD1 86 aa16.51■□□□□ 0.23
SHOX2-203ENST00000441443 IGHV1-24A0A0C4DH33 117 aa16.51■□□□□ 0.23
SHOX2-203ENST00000441443 OR2J3O76001 311 aa16.51■□□□□ 0.23
SHOX2-203ENST00000441443 SLC25A2Q9BXI2 301 aa16.51■□□□□ 0.23
SHOX2-203ENST00000441443 GNG5P63218 68 aa16.5■□□□□ 0.23
SHOX2-203ENST00000441443 FAM167A-AS1Q96KT0 104 aa16.5■□□□□ 0.23
SHOX2-203ENST00000441443 GAGE12BA1L429 117 aa16.5■□□□□ 0.23
SHOX2-203ENST00000441443 SSX8Q7RTT4 187 aa16.5■□□□□ 0.23
SHOX2-203ENST00000441443 TRAV8-6A0A0B4J262 113 aa16.49■□□□□ 0.23
SHOX2-203ENST00000441443 J3QW42 95 aa16.49■□□□□ 0.23
SHOX2-203ENST00000441443 LEPROTL1O95214 131 aa16.49■□□□□ 0.23
SHOX2-203ENST00000441443 FDCSPQ8NFU4 85 aa16.49■□□□□ 0.23
SHOX2-203ENST00000441443 CSTL1Q9H114 145 aa16.49■□□□□ 0.23
SHOX2-203ENST00000441443 SAA2P0DJI9 122 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms