RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 LINC00596Q86U02 117 aa13.78□□□□□ -0.2
PMS1-213ENST00000441310 PLEKHA3Q9HB20 300 aa13.78□□□□□ -0.2
PMS1-213ENST00000441310 LINC00473A8K010 186 aa13.78□□□□□ -0.2
PMS1-213ENST00000441310 TRAT1Q6PIZ9 186 aa13.78□□□□□ -0.2
PMS1-213ENST00000441310 FAM216AQ8WUB2 273 aa13.78□□□□□ -0.2
PMS1-213ENST00000441310 WFDC12Q8WWY7 111 aa13.78□□□□□ -0.2
PMS1-213ENST00000441310 LINC00479Q96M42 142 aa13.78□□□□□ -0.2
PMS1-213ENST00000441310 TRIB1Q96RU8 372 aa13.78□□□□□ -0.2
PMS1-213ENST00000441310 NDUFS8O00217 210 aa13.77□□□□□ -0.2
PMS1-213ENST00000441310 PPIAL4GP0DN37 164 aa13.77□□□□□ -0.2
PMS1-213ENST00000441310 PLP2Q04941 152 aa13.77□□□□□ -0.2
PMS1-213ENST00000441310 KLF5Q13887 457 aaPredicted RBP13.77□□□□□ -0.2
PMS1-213ENST00000441310 NUP35Q8NFH5 326 aa13.77□□□□□ -0.2
PMS1-213ENST00000441310 ZNF835Q9Y2P0 537 aa13.77□□□□□ -0.2
PMS1-213ENST00000441310 AREGP15514 252 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 VKORC1L1Q8N0U8 176 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 RAB37Q96AX2 223 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 FAM234AQ9H0X4 552 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 HILPDAQ9Y5L2 63 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 OR51B2Q9Y5P1 312 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 IGHV3-43A0A0B4J1X8 118 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 IGHV1-24A0A0C4DH33 117 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 SMPD2O60906 423 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 HBZP02008 142 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 IGHV3-43DP0DP04 118 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 CEBPDP49716 269 aaPredicted RBP13.77□□□□□ -0.21
PMS1-213ENST00000441310 PLP1P60201 277 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 OR4A5Q8NH83 315 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 C1orf159Q96HA4 380 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 LINC00470Q9BZP3 86 aa13.77□□□□□ -0.21
PMS1-213ENST00000441310 GGTLC3B5MD39 225 aa13.76□□□□□ -0.21
PMS1-213ENST00000441310 AZU1P20160 251 aa13.76□□□□□ -0.21
PMS1-213ENST00000441310 RPL24P83731 157 aaKnown RBP13.76□□□□□ -0.21
PMS1-213ENST00000441310 HSD17B10Q99714 261 aaKnown RBP13.76□□□□□ -0.21
PMS1-213ENST00000441310 DEFB108AA8MXU0 73 aa13.76□□□□□ -0.21
PMS1-213ENST00000441310 LYZL6O75951 148 aa13.76□□□□□ -0.21
PMS1-213ENST00000441310 PRAMEF5Q5TYX0 476 aa13.76□□□□□ -0.21
PMS1-213ENST00000441310 PRAMEF6Q5VXH4 476 aa13.76□□□□□ -0.21
PMS1-213ENST00000441310 COLCA1Q6ZS62 124 aa13.76□□□□□ -0.21
PMS1-213ENST00000441310 PIP4P1Q86T03 277 aa13.76□□□□□ -0.21
PMS1-213ENST00000441310 BPIFA4PQ86YQ2 179 aa13.76□□□□□ -0.21
PMS1-213ENST00000441310 HEATR1Q9H583 2144 aaKnown RBP13.76□□□□□ -0.21
PMS1-213ENST00000441310 ANKRD11Q6UB99 2663 aaPredicted RBP13.76□□□□□ -0.21
PMS1-213ENST00000441310 FABP6P51161 128 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 TMEM97Q5BJF2 176 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 FAM214BQ7L5A3 538 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 CNEP1R1Q8N9A8 125 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 PLPPR2Q96GM1 343 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 KCNIP1Q9NZI2 227 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 DMXL2Q8TDJ6 3036 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 TCTAP57738 103 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 DEFB109BQ30KR1 87 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 TCF24Q7RTU0 167 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 MDP1Q86V88 176 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 TMEM178AQ8NBL3 297 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 GALMQ96C23 342 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 POM121L2Q96KW2 1035 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 THYN1Q9P016 225 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 HIST1H1EP10412 219 aaKnown RBP13.75□□□□□ -0.21
PMS1-213ENST00000441310 IGFBP2P18065 325 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 GNG3P63215 75 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 PRSS57Q6UWY2 283 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 OR4A16Q8NH70 328 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 TAAR6Q96RI8 345 aa13.75□□□□□ -0.21
PMS1-213ENST00000441310 ANKRD30BLA7E2S9 258 aa13.74□□□□□ -0.21
PMS1-213ENST00000441310 K7EP34 96 aa13.74□□□□□ -0.21
PMS1-213ENST00000441310 CRXO43186 299 aaPredicted RBP13.74□□□□□ -0.21
PMS1-213ENST00000441310 TEPPQ6URK8 271 aa13.74□□□□□ -0.21
PMS1-213ENST00000441310 C2orf91Q6ZV80 131 aa13.74□□□□□ -0.21
PMS1-213ENST00000441310 OR2K2Q8NGT1 345 aa13.74□□□□□ -0.21
PMS1-213ENST00000441310 ZNF138P52744 262 aa13.74□□□□□ -0.21
PMS1-213ENST00000441310 SLC35E4Q6ICL7 350 aa13.74□□□□□ -0.21
PMS1-213ENST00000441310 ZBTB34Q8NCN2 500 aa13.74□□□□□ -0.21
PMS1-213ENST00000441310 HCFC1P51610 2035 aa13.74□□□□□ -0.21
PMS1-213ENST00000441310 C9orf118A6NHY6 69 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 C12orf77C9JDV5 145 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 LTC4SQ16873 150 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 BHLHA15Q7RTS1 189 aaPredicted RBP13.73□□□□□ -0.21
PMS1-213ENST00000441310 NEGR1Q7Z3B1 354 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 WIPF2Q8TF74 440 aaPredicted RBP13.73□□□□□ -0.21
PMS1-213ENST00000441310 SNRNP40Q96DI7 357 aaKnown RBP13.73□□□□□ -0.21
PMS1-213ENST00000441310 DUSP13Q9UII6 198 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 A0A1W2PRE2 83 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 HIGD1CA8MV81 97 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 OR10AG1Q8NH19 301 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 IGF2BP2-AS1Q96M15 143 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 OR2V2Q96R30 315 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 ATMQ13315 3056 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 FCGR3BO75015 233 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 HLA-DRB1P01911 266 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 MEF2CQ06413 473 aaPredicted RBP13.73□□□□□ -0.21
PMS1-213ENST00000441310 RFESDQ8TAC1 157 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 NANOS1Q8WY41 292 aaKnown RBP13.73□□□□□ -0.21
PMS1-213ENST00000441310 PERPQ96FX8 193 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 TMEM167BQ9NRX6 74 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 MBNL3Q9NUK0 354 aaKnown RBP13.73□□□□□ -0.21
PMS1-213ENST00000441310 LSM4Q9Y4Z0 139 aaKnown RBP13.73□□□□□ -0.21
PMS1-213ENST00000441310 SPTA1P02549 2419 aa13.73□□□□□ -0.21
PMS1-213ENST00000441310 TRAV3A0A0B4J244 114 aa13.72□□□□□ -0.21
PMS1-213ENST00000441310 PRSS46E5RG02 174 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms