RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 PCNPQ8WW12 178 aaKnown RBP3.16□□□□□ -1.9
HMGB1P37-201ENST00000439613 SLC35E1Q96K37 410 aa3.16□□□□□ -1.9
HMGB1P37-201ENST00000439613 TMEM68Q96MH6 324 aa3.16□□□□□ -1.9
HMGB1P37-201ENST00000439613 FAM210AQ96ND0 272 aa3.16□□□□□ -1.9
HMGB1P37-201ENST00000439613 RASL11BQ9BPW5 248 aa3.16□□□□□ -1.9
HMGB1P37-201ENST00000439613 C19orf24Q9BVV8 132 aa3.16□□□□□ -1.9
HMGB1P37-201ENST00000439613 NPCDR1Q9BY65 106 aa3.16□□□□□ -1.9
HMGB1P37-201ENST00000439613 SH3BGRL3Q9H299 93 aa3.16□□□□□ -1.9
HMGB1P37-201ENST00000439613 HRH4Q9H3N8 390 aa3.16□□□□□ -1.9
HMGB1P37-201ENST00000439613 SMDT1Q9H4I9 107 aa3.16□□□□□ -1.9
HMGB1P37-201ENST00000439613 PRRC2AP48634 2157 aaKnown RBP3.16□□□□□ -1.9
HMGB1P37-201ENST00000439613 VPS13CQ709C8 3753 aa3.16□□□□□ -1.9
HMGB1P37-201ENST00000439613 MYO9AB2RTY4 2548 aa3.16□□□□□ -1.9
HMGB1P37-201ENST00000439613 ABCA1O95477 2261 aa3.16□□□□□ -1.9
HMGB1P37-201ENST00000439613 CR1P17927 2039 aa3.15□□□□□ -1.9
HMGB1P37-201ENST00000439613 NF1P21359 2839 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 A0A096LNT2 108 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 TRAV40A0A0B4J280 105 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 A0A1B0GW64 132 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 IGLC7A0M8Q6 106 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 CGB1A6NKQ9 187 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 NPIPB5A8MRT5 1133 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 TEX22C9J3V5 150 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 FCN1O00602 326 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 TGFAP01135 160 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 HLA-DRB1P01911 266 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 FABP1P07148 127 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 DEFA4P12838 97 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 MYOD1P15172 320 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 HIST1H1BP16401 226 aaKnown RBP3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 CNTFRP26992 372 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 TAGLN2P37802 199 aaKnown RBP3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 RPL29P47914 159 aaKnown RBP3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 PPT1P50897 306 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 SELENOTP62341 195 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 RUNX1Q01196 453 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 ZNF616Q08AN1 781 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 PMS2P11Q13670 270 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 GAMTQ14353 236 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 PEA15Q15121 130 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 MRGPRG-AS1Q2M3A8 158 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 TMEM249Q2WGJ8 235 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 ACOT6Q3I5F7 207 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 GAGE13Q4V321 117 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 PVRIGQ6DKI7 326 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 SLC16A13Q7RTY0 426 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 C16orf82Q7Z2V1 217 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 TMEM144Q7Z5S9 345 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 OR10G4Q8NGN3 311 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 OR10G9Q8NGN4 311 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 OR10G7Q8NGN6 311 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 NANPQ8TBE9 248 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 ABHD5Q8WTS1 349 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 SFT2D1Q8WV19 159 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 SSMEM1Q8WWF3 244 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 MBD3L1Q8WWY6 194 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 SRSF12Q8WXF0 261 aaKnown RBP3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 ARPC1AQ92747 370 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 RBMXL1Q96E39 390 aaKnown RBP3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 CXorf58Q96LI9 332 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 Q96MF0 132 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 P2RX4Q99571 388 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 FOXC2Q99958 501 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 PBDC1Q9BVG4 233 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 ACTR3CQ9C0K3 210 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 RPRMQ9NS64 109 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 SLC39A9Q9NUM3 307 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 THYN1Q9P016 225 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 PITPNC1Q9UKF7 332 aa3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 LSM4Q9Y4Z0 139 aaKnown RBP3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 F11RQ9Y624 299 aaKnown RBP3.15□□□□□ -1.91
HMGB1P37-201ENST00000439613 A0A0U1RQK1 487 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 CTXND1A0A1B0GTU2 59 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 A0A1W2PPV4 95 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 MAP1LC3B2A6NCE7 125 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 SEC14L6B5MCN3 397 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 E7EUB6 86 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 I3L521 148 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 AGPAT2O15120 278 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 SCGB2A1O75556 95 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 MT-CO2P00403 227 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 IFNA1P01562 189 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 CRYGCP07315 174 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 IGHV4-31P0DP07 118 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 IGHV4-38-2P0DP08 117 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 AREGP15514 252 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 M6PRP20645 277 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 ZP3P21754 424 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 CD24P25063 80 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 ELLP55199 621 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 RHOBP62745 196 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 CX3CL1P78423 397 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 FOXL1Q12952 345 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 ICAM4Q14773 271 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 C19orf54Q5BKX5 351 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 FFAR4Q5NUL3 377 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 C10orf55Q5SWW7 151 aa3.14□□□□□ -1.91
HMGB1P37-201ENST00000439613 FAM120AOSQ5T036 256 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms